© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g3860.t1 |
| Gene name | |
| Location | scaffold_018:229744..231617 |
| Strand | + |
| Gene length (bp) | 1873 |
| Transcript length (bp) | 1560 |
| Coding sequence length (bp) | 1560 |
| Protein length (aa) | 520 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.3E-30 | 17 | 448 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 3.9E-11 | 49 | 214 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 25 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 13 | 35 | 22 |
| 2 | 48 | 70 | 22 |
| 3 | 82 | 101 | 19 |
| 4 | 106 | 128 | 22 |
| 5 | 140 | 162 | 22 |
| 6 | 184 | 206 | 22 |
| 7 | 283 | 305 | 22 |
| 8 | 335 | 357 | 22 |
| 9 | 370 | 392 | 22 |
| 10 | 397 | 419 | 22 |
| 11 | 426 | 448 | 22 |
| 12 | 463 | 485 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g3860.t1 MLEKPARLPVRQLVILSICRFAEPVVLTSVLPYLPEMIDHVGVPKSEIAKWVGITTAVTSLSQALMAVTWGTLSD TLGRKPIILVGLTCTMVFSLLFGFSSSLSMLVISRALLGLMNGNVGIIRTMVAEMVPQKELQPRAFSIMPLVWTI GSIFGPAFGGALARPAEKHPGLFGGSEFLRKWPFALPNIASAVFFVVGIATGWLFLHETLAAKKHHRDYGLVVGE ALTSSCTSSRKKKSESHASDAERQSLLPPNTTRPATATAAKKSKPTWSEIFTPQSRLVLLAYALMSMHAMAFDSV LPVFLHSPEQQYEGNPDVKLPFKFTGGFGVDSQTIGIYYTLEGILGMFIQFLIFPWAAQTFGVLNCLKAVASVFP VIYLLTPFTVLLPVPWLRTVAIFCLMLGKLSASIFGFPCTTILLTNSASSLSVLGTLNGVGTSVSAVGRAVGPAI IGGAYSWGVKRGWGIVPWWVLGVFGMLSAVPVGWMGEENRLQDAQEVNDEEGGEEEGEGERGYGSVGGR* |
| Coding | >Ani_SJS100_1|g3860.t1 ATGTTGGAGAAACCCGCCCGGCTGCCTGTTCGGCAGCTGGTCATTCTCTCAATATGTCGCTTCGCAGAGCCGGTC GTCTTGACCTCCGTCCTTCCCTACCTGCCCGAAATGATCGACCACGTCGGCGTCCCCAAATCCGAAATCGCCAAA TGGGTCGGCATCACCACCGCCGTGACCTCTCTCTCGCAGGCCCTCATGGCCGTCACTTGGGGCACTCTCTCCGAC ACTCTCGGCCGCAAACCCATCATCCTAGTCGGGCTCACCTGCACCATGGTCTTCTCGCTTCTATTCGGCTTCTCC TCGTCCCTCTCCATGCTAGTCATCTCCCGCGCCCTGCTCGGGCTCATGAACGGCAACGTGGGCATCATCCGCACC ATGGTTGCGGAAATGGTGCCCCAGAAGGAACTTCAGCCCCGCGCGTTTAGTATCATGCCGCTGGTGTGGACGATC GGGAGTATTTTTGGTCCGGCGTTTGGGGGCGCGTTGGCGAGGCCCGCGGAGAAGCATCCGGGGTTGTTTGGGGGG TCAGAGTTCCTCAGGAAGTGGCCGTTTGCGTTACCGAATATTGCTTCCGCGGTGTTTTTTGTTGTTGGGATTGCG ACGGGGTGGTTGTTTTTGCATGAAACGCTCGCTGCGAAGAAACATCATCGCGACTATGGATTGGTTGTCGGCGAG GCATTGACTAGCTCGTGTACTTCTTCTCGGAAGAAGAAGTCAGAGTCTCACGCATCAGATGCAGAACGACAATCC CTTCTACCACCAAACACTACTCGTCCAGCGACAGCAACAGCAGCAAAGAAATCCAAACCAACCTGGAGCGAGATC TTCACTCCCCAATCCAGGCTCGTTCTCCTCGCTTACGCCCTCATGTCCATGCACGCTATGGCCTTCGATTCCGTC CTCCCTGTCTTCCTGCATAGCCCGGAACAGCAATACGAGGGTAACCCGGACGTGAAACTCCCCTTCAAATTCACT GGTGGATTCGGCGTCGACTCCCAAACCATCGGCATCTACTACACCCTCGAAGGCATCCTCGGCATGTTCATCCAA TTCCTCATCTTCCCCTGGGCGGCCCAAACCTTCGGCGTACTCAACTGCCTAAAAGCCGTGGCCAGCGTGTTCCCG GTCATCTACCTGCTCACGCCATTCACAGTGCTTCTTCCCGTCCCGTGGCTGCGCACCGTGGCGATTTTCTGCCTC ATGTTGGGGAAATTGTCCGCCTCGATCTTCGGCTTTCCATGCACCACCATCCTGTTGACGAATTCAGCAAGTAGC TTGAGCGTCTTGGGGACGTTGAATGGGGTCGGCACGAGTGTGAGTGCCGTGGGGAGGGCAGTGGGACCGGCGATT ATTGGGGGGGCGTACTCGTGGGGAGTGAAGAGGGGGTGGGGGATTGTGCCGTGGTGGGTGCTGGGGGTGTTTGGG ATGTTGAGTGCGGTGCCGGTGGGGTGGATGGGGGAAGAGAATCGGTTGCAGGATGCACAGGAGGTGAATGATGAA GAGGGAGGAGAGGAAGAAGGGGAGGGGGAGAGAGGGTATGGGAGTGTTGGGGGGAGGTAA |
| Transcript | >Ani_SJS100_1|g3860.t1 ATGTTGGAGAAACCCGCCCGGCTGCCTGTTCGGCAGCTGGTCATTCTCTCAATATGTCGCTTCGCAGAGCCGGTC GTCTTGACCTCCGTCCTTCCCTACCTGCCCGAAATGATCGACCACGTCGGCGTCCCCAAATCCGAAATCGCCAAA TGGGTCGGCATCACCACCGCCGTGACCTCTCTCTCGCAGGCCCTCATGGCCGTCACTTGGGGCACTCTCTCCGAC ACTCTCGGCCGCAAACCCATCATCCTAGTCGGGCTCACCTGCACCATGGTCTTCTCGCTTCTATTCGGCTTCTCC TCGTCCCTCTCCATGCTAGTCATCTCCCGCGCCCTGCTCGGGCTCATGAACGGCAACGTGGGCATCATCCGCACC ATGGTTGCGGAAATGGTGCCCCAGAAGGAACTTCAGCCCCGCGCGTTTAGTATCATGCCGCTGGTGTGGACGATC GGGAGTATTTTTGGTCCGGCGTTTGGGGGCGCGTTGGCGAGGCCCGCGGAGAAGCATCCGGGGTTGTTTGGGGGG TCAGAGTTCCTCAGGAAGTGGCCGTTTGCGTTACCGAATATTGCTTCCGCGGTGTTTTTTGTTGTTGGGATTGCG ACGGGGTGGTTGTTTTTGCATGAAACGCTCGCTGCGAAGAAACATCATCGCGACTATGGATTGGTTGTCGGCGAG GCATTGACTAGCTCGTGTACTTCTTCTCGGAAGAAGAAGTCAGAGTCTCACGCATCAGATGCAGAACGACAATCC CTTCTACCACCAAACACTACTCGTCCAGCGACAGCAACAGCAGCAAAGAAATCCAAACCAACCTGGAGCGAGATC TTCACTCCCCAATCCAGGCTCGTTCTCCTCGCTTACGCCCTCATGTCCATGCACGCTATGGCCTTCGATTCCGTC CTCCCTGTCTTCCTGCATAGCCCGGAACAGCAATACGAGGGTAACCCGGACGTGAAACTCCCCTTCAAATTCACT GGTGGATTCGGCGTCGACTCCCAAACCATCGGCATCTACTACACCCTCGAAGGCATCCTCGGCATGTTCATCCAA TTCCTCATCTTCCCCTGGGCGGCCCAAACCTTCGGCGTACTCAACTGCCTAAAAGCCGTGGCCAGCGTGTTCCCG GTCATCTACCTGCTCACGCCATTCACAGTGCTTCTTCCCGTCCCGTGGCTGCGCACCGTGGCGATTTTCTGCCTC ATGTTGGGGAAATTGTCCGCCTCGATCTTCGGCTTTCCATGCACCACCATCCTGTTGACGAATTCAGCAAGTAGC TTGAGCGTCTTGGGGACGTTGAATGGGGTCGGCACGAGTGTGAGTGCCGTGGGGAGGGCAGTGGGACCGGCGATT ATTGGGGGGGCGTACTCGTGGGGAGTGAAGAGGGGGTGGGGGATTGTGCCGTGGTGGGTGCTGGGGGTGTTTGGG ATGTTGAGTGCGGTGCCGGTGGGGTGGATGGGGGAAGAGAATCGGTTGCAGGATGCACAGGAGGTGAATGATGAA GAGGGAGGAGAGGAAGAAGGGGAGGGGGAGAGAGGGTATGGGAGTGTTGGGGGGAGGTAA |
| Gene | >Ani_SJS100_1|g3860.t1 ATGTTGGAGAAACCCGCCCGGCTGCCTGTTCGGCAGCTGGTCATTCTCTGTATGTCCTAGATGTTATTATCCCAA GCTGATAGCTGTATACTGACCGATATACCACATAGCAATATGTCGCTTCGCAGAGCCGGGTACGTTCACTCAACA TACCCTCCTCCTGAGTAAATTCTAATGCGATATAAAATAAAAAAACAGTCGTCTTGACCTCCGTCCTTCCCTACC TGGTACATCCCATCCCCATTAAAATACCGCAGAACTAGAAGAAAACTGACAGAAAGATATAGCCCGAAATGATCG ACCACGTCGGCGTCCCCAAATCCGAAATCGCCAAATGGGTCGGCATCACCACCGCCGTGACCTCTCTCTCGCAGG CCCTCATGGCCGTCACTTGGGGCACTCTCTCCGACACTCTCGGCCGCAAACCCATCATCCTAGTCGGGCTCACCT GCACCATGGTCTTCTCGCTTCTATTCGGCTTCTCCTCGTCCCTCTCCATGCTAGTCATCTCCCGCGCCCTGCTCG GGCTCATGAACGGCAACGTGGGCATCATCCGCACCATGGTTGCGGAAATGGTGCCCCAGAAGGAACTTCAGCCCC GCGCGTTTAGTATCATGCCGCTGGTGTGGACGATCGGGAGTATTTTTGGTCCGGCGTTTGGGGGCGCGTTGGCGA GGCCCGCGGAGAAGCATCCGGGGTTGTTTGGGGGGTCAGAGTTCCTCAGGAAGTGGCCGTTTGCGTTACCGAATA TTGCTTCCGCGGTGTTTTTTGTTGTTGGGATTGCGACGGGGTGGTTGTTTTTGCATGTATATCTATCCTCCCCTT TTATCTGGAAATGAGAGGGATGTGCTAATGTGGGTATGGTATAGGAAACGCTCGCTGCGAAGAAACATCATCGCG ACTATGGATTGGTTGTCGGCGAGGCATTGACTAGCTCGTGTACTTCTTCTCGGAAGAAGAAGTCAGAGTCTCACG CATCAGATGCAGAACGACAATCCCTTCTACCACCAAACACTACTCGTCCAGCGACAGCAACAGCAGCAAAGAAAT CCAAACCAACCTGGAGCGAGATCTTCACTCCCCAATCCAGGCTCGTTCTCCTCGCTTACGCCCTCATGTCCATGC ACGCTATGGCCTTCGATTCCGTCCTCCCTGTCTTCCTGCATAGCCCGGAACAGCAATACGAGGGTAACCCGGACG TGAAACTCCCCTTCAAATTCACTGGTGGATTCGGCGTCGGTATGATCCCTTACTCCTTCCCATCCCCTTTCCCTT TCACTCTCCATACTAAATGCAAGAAATAGACTCCCAAACCATCGGCATCTACTACACCCTCGAAGGCATCCTCGG CATGTTCATCCAATTCCTCATCTTCCCCTGGGCGGCCCAAACCTTCGGCGTACTCAACTGCCTAAAAGCCGTGGC CAGCGTGTTCCCGGTCATCTACCTGCTCACGCCATTCACAGTGCTTCTTCCCGTCCCGTGGCTGCGCACCGTGGC GATTTTCTGCCTCATGTTGGGGAAATTGTCCGCCTCGATCTTCGGCTTTCCATGCACCACCATCCTGTTGACGAA TTCAGCAAGTAGCTTGAGCGTCTTGGGGACGTTGAATGGGGTCGGCACGAGTGTGAGTGCCGTGGGGAGGGCAGT GGGACCGGCGATTATTGGGGGGGCGTACTCGTGGGGAGTGAAGAGGGGGTGGGGGATTGTGCCGTGGTGGGTGCT GGGGGTGTTTGGGATGTTGAGTGCGGTGCCGGTGGGGTGGATGGGGGAAGAGAATCGGTTGCAGGATGCACAGGA GGTGAATGATGAAGAGGGAGGAGAGGAAGAAGGGGAGGGGGAGAGAGGGTATGGGAGTGTTGGGGGGAGGTAA |