Protein ID | Ani_SJS100_1|g3839.t1 |
Gene name | |
Location | scaffold_018:158253..161188 |
Strand | - |
Gene length (bp) | 2935 |
Transcript length (bp) | 2832 |
Coding sequence length (bp) | 2832 |
Protein length (aa) | 944 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF08314 | Sec39 | Secretory pathway protein Sec39 | 5.1E-277 | 13 | 800 |
GO Term | Description | Terminal node |
---|---|---|
GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | Yes |
GO:0008150 | biological_process | No |
GO:0051234 | establishment of localization | No |
GO:0016192 | vesicle-mediated transport | No |
GO:0051179 | localization | No |
GO:0048193 | Golgi vesicle transport | No |
GO:0006810 | transport | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 28 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g3839.t1 MAVLQGLSGAHAILLATHLCATGNVVALPHLQAKFPAHLPLERVLRIILTFLPESTEPSSYTPVLQALVDGQLPE AGGAGIDTTSVKDLPAAIVRKRVRKIRLLPLQYPGDEDSQDPSDLLTKFLIHRAHRIDLETALQPLVLDLLLPFY QRSEVLRTWLISSLLPLLRLNYEYYPSQDETFSLDILESMDNSIAVNVLLSMTGATKSSMDLVRNLRGLVGAWMY GSNRSKRRRLNEAMQETSIVLPQDEAQPKTPSGVGWQQVNEWLLARSLVDHESAVNAFVNWDGPEDVDLGGYAED KEGLSDDELQDLRRRYGQTGLAVVYANSDPSPPALDGSVRILARIAEFLKLEEHSFLSPDNSEFPDVKFDPVPIS SASRVSLLQNALLVASNPLTRPSASSISFLSGICLSLRILNDLGHPTPCRTAANICLLNNQETQLFELRSVIASV VRQARSGHDWSKTRQQLLWLRDWQADHTENTSDRPDYHGLFWRVPQDVVEAEILKALLEAKEYHLAVSIYIVSGS TLSSTQVEEAVKEAIFTAYDNASNGNRTRGGMKRAYDILQAFQPHFSDSASFKQIQALISATHALSFYSLTLQHG VPFQPVSIRVHPDPLSLIEKVLDQNPKSYTKLDDLLAIGRNLVLAGVSHSPSDEDVSPFLSPPSQEDAAITAERR IMSLAISSALSSNDFGTAYSYILTRLTPPSLLPTSSPLTNPTSPKDDITWRAVYNAGRYRAPATSATPNNQTQIT HLSQRMELLSLALVLAPSPEPLPEILGAWRRCDEELAALRARESEEEDIWDTKADNLTSTTLPGGFGPTDSEQDA FETRQHQARRARAHASQNRLHHEEAPMGLFEVARGAALALQKNAFPLRSAAASAKTNTHDHDDHSVPSSSHLRSG SSMSTDDQDGEGRVRKRDVVSNMVTDGLVSGIGWVLGAQPVNR* |
Coding | >Ani_SJS100_1|g3839.t1 ATGGCGGTCCTTCAAGGGCTCTCAGGTGCTCATGCGATTCTTCTAGCGACTCATCTCTGTGCCACCGGCAATGTG GTTGCTCTCCCGCACTTGCAGGCAAAGTTCCCTGCCCATCTCCCGCTCGAGCGTGTCTTGCGCATCATCTTGACC TTTCTGCCCGAGAGCACAGAGCCGAGCTCTTACACACCAGTGCTGCAGGCGCTGGTAGATGGCCAACTACCTGAA GCCGGTGGTGCTGGCATCGATACCACCTCTGTTAAAGACCTGCCCGCGGCGATCGTGAGGAAACGTGTACGGAAG ATTCGTTTACTACCATTACAGTATCCAGGCGACGAGGACAGCCAGGACCCCTCTGACCTCCTAACCAAATTCCTC ATTCACCGGGCCCATCGCATCGACTTAGAAACCGCTCTTCAACCTCTCGTCCTCGATCTTCTCCTCCCCTTCTAC CAACGCTCAGAAGTATTACGCACATGGTTGATCTCCAGTCTCTTACCGCTACTCCGATTGAACTACGAGTATTAC CCCAGCCAAGACGAAACTTTTTCCCTGGATATCCTGGAGTCGATGGACAACAGTATTGCGGTCAACGTTCTTCTT TCGATGACTGGTGCGACAAAGAGCAGCATGGACTTGGTACGAAATCTACGCGGCCTTGTGGGTGCTTGGATGTAT GGTAGCAACCGTTCCAAAAGACGGAGACTCAATGAAGCGATGCAAGAGACGTCGATTGTTCTGCCTCAGGATGAA GCGCAACCAAAAACCCCTTCAGGTGTCGGGTGGCAGCAAGTCAATGAGTGGCTGCTGGCACGAAGCCTCGTTGAT CATGAGAGTGCGGTAAACGCCTTCGTCAATTGGGACGGGCCTGAGGATGTCGATCTAGGTGGATATGCTGAAGAC AAGGAAGGTTTGTCGGATGATGAGCTGCAAGACTTGCGCAGGAGGTATGGACAGACTGGGCTTGCTGTCGTATAT GCGAACTCTGATCCTAGCCCTCCGGCGCTGGACGGTTCCGTTCGAATTCTCGCGCGCATTGCGGAGTTCCTAAAG CTCGAAGAACACTCGTTCCTTTCGCCGGACAACTCAGAATTCCCCGACGTGAAATTCGATCCAGTGCCGATTTCG TCGGCATCAAGGGTATCCCTGCTGCAGAATGCCCTGCTGGTGGCCTCAAACCCTCTTACGCGCCCTTCTGCCTCG TCAATATCCTTCCTTAGTGGTATCTGCCTCTCTCTTCGGATACTGAACGATTTAGGCCACCCGACTCCATGCAGG ACAGCGGCAAACATCTGTCTCCTCAATAATCAGGAAACACAGCTGTTCGAATTGCGCAGTGTAATAGCCTCTGTC GTAAGACAAGCAAGATCGGGTCATGACTGGAGCAAGACTCGCCAACAATTGCTATGGCTGCGTGACTGGCAAGCT GATCACACGGAAAACACCAGCGATCGTCCCGACTACCATGGTCTCTTTTGGAGAGTTCCGCAGGACGTCGTCGAA GCAGAAATATTGAAAGCGTTGCTTGAAGCCAAAGAATACCATCTTGCTGTGAGCATCTACATTGTCTCTGGGTCA ACTTTGAGCTCTACACAGGTTGAAGAAGCCGTCAAGGAGGCCATCTTCACAGCCTACGACAACGCGAGCAACGGA AATAGGACCAGGGGCGGGATGAAGCGAGCATACGACATTCTACAAGCTTTTCAACCTCACTTCTCAGATTCTGCC TCCTTCAAGCAGATCCAAGCCCTCATATCCGCCACGCACGCCCTGTCTTTCTACTCCCTTACTTTGCAGCACGGC GTCCCTTTCCAGCCAGTCAGCATCCGCGTCCACCCCGACCCTCTCTCCCTGATCGAGAAAGTTCTCGACCAGAAC CCTAAGAGCTACACCAAACTGGACGACTTATTAGCCATTGGCCGGAACCTTGTTTTAGCAGGTGTCTCCCACTCT CCATCCGACGAAGATGTCTCCCCCTTCTTGTCCCCTCCCTCACAGGAAGACGCCGCCATCACCGCCGAACGCCGT ATCATGTCCCTCGCTATTTCCTCCGCCCTTTCCTCGAACGACTTCGGCACGGCCTACTCCTACATTCTCACCCGT CTCACTCCCCCATCCCTTCTCCCTACGTCCTCCCCTCTCACCAACCCCACTTCCCCCAAAGACGACATCACCTGG CGAGCCGTCTACAACGCCGGTCGCTACCGCGCCCCAGCCACCAGCGCCACCCCCAACAACCAGACCCAAATCACG CACCTCTCCCAACGCATGGAACTCCTCTCTCTCGCCCTTGTCCTCGCCCCCAGCCCCGAACCTTTGCCCGAAATC CTGGGCGCCTGGCGCCGCTGCGACGAGGAACTAGCAGCTCTCCGCGCACGCGAATCCGAGGAAGAAGACATCTGG GACACCAAAGCCGACAACCTCACCTCCACCACCCTTCCGGGAGGCTTCGGCCCCACAGACAGCGAACAAGACGCG TTCGAAACGAGACAGCACCAAGCCCGACGAGCACGGGCGCACGCCTCACAGAACCGTCTCCATCATGAAGAAGCT CCCATGGGGCTGTTCGAGGTTGCCCGCGGCGCCGCTCTAGCGTTGCAAAAGAACGCCTTCCCGCTCCGGTCAGCT GCAGCGTCCGCAAAGACAAACACCCACGACCATGATGACCACTCCGTCCCCTCCTCTTCTCATCTCCGCAGTGGC TCCTCCATGTCCACCGATGACCAGGACGGCGAAGGCCGCGTCCGCAAGAGAGACGTCGTCAGTAACATGGTCACG GATGGACTCGTCAGTGGCATTGGTTGGGTATTGGGTGCTCAGCCTGTCAATCGGTGA |
Transcript | >Ani_SJS100_1|g3839.t1 ATGGCGGTCCTTCAAGGGCTCTCAGGTGCTCATGCGATTCTTCTAGCGACTCATCTCTGTGCCACCGGCAATGTG GTTGCTCTCCCGCACTTGCAGGCAAAGTTCCCTGCCCATCTCCCGCTCGAGCGTGTCTTGCGCATCATCTTGACC TTTCTGCCCGAGAGCACAGAGCCGAGCTCTTACACACCAGTGCTGCAGGCGCTGGTAGATGGCCAACTACCTGAA GCCGGTGGTGCTGGCATCGATACCACCTCTGTTAAAGACCTGCCCGCGGCGATCGTGAGGAAACGTGTACGGAAG ATTCGTTTACTACCATTACAGTATCCAGGCGACGAGGACAGCCAGGACCCCTCTGACCTCCTAACCAAATTCCTC ATTCACCGGGCCCATCGCATCGACTTAGAAACCGCTCTTCAACCTCTCGTCCTCGATCTTCTCCTCCCCTTCTAC CAACGCTCAGAAGTATTACGCACATGGTTGATCTCCAGTCTCTTACCGCTACTCCGATTGAACTACGAGTATTAC CCCAGCCAAGACGAAACTTTTTCCCTGGATATCCTGGAGTCGATGGACAACAGTATTGCGGTCAACGTTCTTCTT TCGATGACTGGTGCGACAAAGAGCAGCATGGACTTGGTACGAAATCTACGCGGCCTTGTGGGTGCTTGGATGTAT GGTAGCAACCGTTCCAAAAGACGGAGACTCAATGAAGCGATGCAAGAGACGTCGATTGTTCTGCCTCAGGATGAA GCGCAACCAAAAACCCCTTCAGGTGTCGGGTGGCAGCAAGTCAATGAGTGGCTGCTGGCACGAAGCCTCGTTGAT CATGAGAGTGCGGTAAACGCCTTCGTCAATTGGGACGGGCCTGAGGATGTCGATCTAGGTGGATATGCTGAAGAC AAGGAAGGTTTGTCGGATGATGAGCTGCAAGACTTGCGCAGGAGGTATGGACAGACTGGGCTTGCTGTCGTATAT GCGAACTCTGATCCTAGCCCTCCGGCGCTGGACGGTTCCGTTCGAATTCTCGCGCGCATTGCGGAGTTCCTAAAG CTCGAAGAACACTCGTTCCTTTCGCCGGACAACTCAGAATTCCCCGACGTGAAATTCGATCCAGTGCCGATTTCG TCGGCATCAAGGGTATCCCTGCTGCAGAATGCCCTGCTGGTGGCCTCAAACCCTCTTACGCGCCCTTCTGCCTCG TCAATATCCTTCCTTAGTGGTATCTGCCTCTCTCTTCGGATACTGAACGATTTAGGCCACCCGACTCCATGCAGG ACAGCGGCAAACATCTGTCTCCTCAATAATCAGGAAACACAGCTGTTCGAATTGCGCAGTGTAATAGCCTCTGTC GTAAGACAAGCAAGATCGGGTCATGACTGGAGCAAGACTCGCCAACAATTGCTATGGCTGCGTGACTGGCAAGCT GATCACACGGAAAACACCAGCGATCGTCCCGACTACCATGGTCTCTTTTGGAGAGTTCCGCAGGACGTCGTCGAA GCAGAAATATTGAAAGCGTTGCTTGAAGCCAAAGAATACCATCTTGCTGTGAGCATCTACATTGTCTCTGGGTCA ACTTTGAGCTCTACACAGGTTGAAGAAGCCGTCAAGGAGGCCATCTTCACAGCCTACGACAACGCGAGCAACGGA AATAGGACCAGGGGCGGGATGAAGCGAGCATACGACATTCTACAAGCTTTTCAACCTCACTTCTCAGATTCTGCC TCCTTCAAGCAGATCCAAGCCCTCATATCCGCCACGCACGCCCTGTCTTTCTACTCCCTTACTTTGCAGCACGGC GTCCCTTTCCAGCCAGTCAGCATCCGCGTCCACCCCGACCCTCTCTCCCTGATCGAGAAAGTTCTCGACCAGAAC CCTAAGAGCTACACCAAACTGGACGACTTATTAGCCATTGGCCGGAACCTTGTTTTAGCAGGTGTCTCCCACTCT CCATCCGACGAAGATGTCTCCCCCTTCTTGTCCCCTCCCTCACAGGAAGACGCCGCCATCACCGCCGAACGCCGT ATCATGTCCCTCGCTATTTCCTCCGCCCTTTCCTCGAACGACTTCGGCACGGCCTACTCCTACATTCTCACCCGT CTCACTCCCCCATCCCTTCTCCCTACGTCCTCCCCTCTCACCAACCCCACTTCCCCCAAAGACGACATCACCTGG CGAGCCGTCTACAACGCCGGTCGCTACCGCGCCCCAGCCACCAGCGCCACCCCCAACAACCAGACCCAAATCACG CACCTCTCCCAACGCATGGAACTCCTCTCTCTCGCCCTTGTCCTCGCCCCCAGCCCCGAACCTTTGCCCGAAATC CTGGGCGCCTGGCGCCGCTGCGACGAGGAACTAGCAGCTCTCCGCGCACGCGAATCCGAGGAAGAAGACATCTGG GACACCAAAGCCGACAACCTCACCTCCACCACCCTTCCGGGAGGCTTCGGCCCCACAGACAGCGAACAAGACGCG TTCGAAACGAGACAGCACCAAGCCCGACGAGCACGGGCGCACGCCTCACAGAACCGTCTCCATCATGAAGAAGCT CCCATGGGGCTGTTCGAGGTTGCCCGCGGCGCCGCTCTAGCGTTGCAAAAGAACGCCTTCCCGCTCCGGTCAGCT GCAGCGTCCGCAAAGACAAACACCCACGACCATGATGACCACTCCGTCCCCTCCTCTTCTCATCTCCGCAGTGGC TCCTCCATGTCCACCGATGACCAGGACGGCGAAGGCCGCGTCCGCAAGAGAGACGTCGTCAGTAACATGGTCACG GATGGACTCGTCAGTGGCATTGGTTGGGTATTGGGTGCTCAGCCTGTCAATCGGTGA |
Gene | >Ani_SJS100_1|g3839.t1 ATGGCGGTCCTTCAAGGGCTCTCAGGTGCTCATGCGATTCTTCTAGCGACTCATCTCTGTGCCACCGGCAATGTG GTTGCTCTCCCGCACTTGCAGGCAAAGTTCCCTGCCCATCTCCCGCTCGAGCGTGTCTTGCGCATCATCTTGACC TTTCTGCCCGAGAGCACAGAGCCGAGCTCTTACACACCAGTGCTGCAGGCGCTGGTAGATGGCCAACTACCTGAA GCCGGTGGTGCTGGCATCGATACCACCTCTGTTAAAGACCTGCCCGCGGCGATCGTGAGGAAACGTGTACGGAAG ATTCGTTTACTACCATTACAGTATCCAGGCGACGAGGACAGCCAGGACCCCTCTGACCTCCTAACCAAATTCCTC ATTCACCGGGCCCATCGCATCGACTTAGAAACCGCTCTTCAACCTCTCGTCCTCGATCTTCTCCTCCCCTTCTAC CAACGCTCAGAAGTATTACGCACATGGTTGATCTCCAGTCTCTTACCGCTACTCCGATTGAACTACGAGTATTAC CCCAGCCAAGACGAAACTTTTTCCCTGGATATCCTGGAGTCGATGGACAACAGTATTGCGGTCAACGTTCTTCTT TCGATGACTGGTGCGACAAAGAGCAGCATGGACTTGGTACGAAATCTACGCGGCCTTGTGGGTGCTTGGATGTAT GGTAGCAACCGTTCCAAAAGACGGAGACTCAATGAAGCGATGCAAGAGACGTCGATTGTTCTGCCTCAGGATGAA GCGCAACCAAAAACCCCTTCAGGTGTCGGGTGGCAGCAAGTCAATGAGTGGCTGCTGGCACGAAGCCTCGTTGAT CATGAGAGTGCGGTAAACGCCTTCGTCAATTGGGACGGGCCTGAGGATGTCGATCTAGGTGGATATGCTGAAGAC AAGGAAGGTTTGTCGGATGATGAGCTGCAAGACTTGCGCAGGAGGTATGGACAGACTGGGCTTGCTGTCGTATAT GCGAACTCTGATCCTAGCCCTCCGGCGCTGGACGGTTCCGTTCGAATTCTCGCGCGCATTGCGGAGTTCCTAAAG CTCGAAGAACACTCGTTCCTTTCGCCGGACAACTCAGAATTCCCCGACGTGAAATTCGATCCAGTGCCGATTTCG TCGGCATCAAGGGTATCCCTGCTGCAGAATGCCCTGCTGGTGGCCTCAAACCCTCTTACGCGCCCTTCTGCCTCG TCAATATCCTTCCTTAGTGGTATCTGCCTCTCTCTTCGGATACTGAACGATTTAGGCCACCCGACTCCATGCAGG ACAGCGGCAAACATCTGTCTCCTCAATAATCAGGAAACACAGCTGTTCGAATTGCGCAGTGTAATAGCCTCTGTC GTAAGACAAGCAAGATCGGGTCATGACTGGAGCAAGACTCGCCAACAATTGCTATGGCTGCGTGACTGGCAAGCT GATCACACGGAAAACACCAGCGATCGTCCCGACTACCATGGTCTCTTTTGGAGAGTTCCGCAGGACGTCGTCGAA GCAGAAATATTGAAAGCGTTGCTTGAAGCCAAAGGTGAGCTCGGAGATCACCTCTGTTATTCGGCCTTTACTGAC AACAATAGAATACCATCTTGCTGTGAGCATCTACATTGTCTCTGGGTCAACTTTGAGCTCTACACAGGTTGAAGA AGCCGTCAAGGAGGCCATCTTCACAGCCTACGACAACGCGAGCAACGGAAATAGGACCAGGGGCGGGATGAAGCG AGCATACGACATGTAAGCCAAGAGAATAAACGCCCATCGCCTGGAATTGATACTGACATCCTGCAGTCTACAAGC TTTTCAACCTCACTTCTCAGATTCTGCCTCCTTCAAGCAGATCCAAGCCCTCATATCCGCCACGCACGCCCTGTC TTTCTACTCCCTTACTTTGCAGCACGGCGTCCCTTTCCAGCCAGTCAGCATCCGCGTCCACCCCGACCCTCTCTC CCTGATCGAGAAAGTTCTCGACCAGAACCCTAAGAGCTACACCAAACTGGACGACTTATTAGCCATTGGCCGGAA CCTTGTTTTAGCAGGTGTCTCCCACTCTCCATCCGACGAAGATGTCTCCCCCTTCTTGTCCCCTCCCTCACAGGA AGACGCCGCCATCACCGCCGAACGCCGTATCATGTCCCTCGCTATTTCCTCCGCCCTTTCCTCGAACGACTTCGG CACGGCCTACTCCTACATTCTCACCCGTCTCACTCCCCCATCCCTTCTCCCTACGTCCTCCCCTCTCACCAACCC CACTTCCCCCAAAGACGACATCACCTGGCGAGCCGTCTACAACGCCGGTCGCTACCGCGCCCCAGCCACCAGCGC CACCCCCAACAACCAGACCCAAATCACGCACCTCTCCCAACGCATGGAACTCCTCTCTCTCGCCCTTGTCCTCGC CCCCAGCCCCGAACCTTTGCCCGAAATCCTGGGCGCCTGGCGCCGCTGCGACGAGGAACTAGCAGCTCTCCGCGC ACGCGAATCCGAGGAAGAAGACATCTGGGACACCAAAGCCGACAACCTCACCTCCACCACCCTTCCGGGAGGCTT CGGCCCCACAGACAGCGAACAAGACGCGTTCGAAACGAGACAGCACCAAGCCCGACGAGCACGGGCGCACGCCTC ACAGAACCGTCTCCATCATGAAGAAGCTCCCATGGGGCTGTTCGAGGTTGCCCGCGGCGCCGCTCTAGCGTTGCA AAAGAACGCCTTCCCGCTCCGGTCAGCTGCAGCGTCCGCAAAGACAAACACCCACGACCATGATGACCACTCCGT CCCCTCCTCTTCTCATCTCCGCAGTGGCTCCTCCATGTCCACCGATGACCAGGACGGCGAAGGCCGCGTCCGCAA GAGAGACGTCGTCAGTAACATGGTCACGGATGGACTCGTCAGTGGCATTGGTTGGGTATTGGGTGCTCAGCCTGT CAATCGGTGA |