© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g3820.t1 |
| Gene name | |
| Location | scaffold_018:91815..92815 |
| Strand | + |
| Gene length (bp) | 1000 |
| Transcript length (bp) | 894 |
| Coding sequence length (bp) | 894 |
| Protein length (aa) | 298 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02157 | Man-6-P_recep | Mannose-6-phosphate receptor | 3.6E-15 | 85 | 290 |
| PF09451 | ATG27 | Autophagy-related protein 27 | 3.7E-09 | 80 | 261 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 24 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 214 | 236 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g3820.t1 MKPPTSSLLRFLFLLAAPLVSHAASDSSAPKDGLSPCVVRSPTTGLFYDLNTISLSPPPVDGDKPRKGARDESWH ARGHDYNANFTLNICAPVVEDIKDVVGVDRSRWRNVSAYYEREGKVYSIGQQASDPFFRGRKLVMNYTNGSPCAG DYIGNAARTKSTIMSFLCERDTPASQATVSFVGTMDQCTYFFEVRSSAACGATAPTPDNPGLSPGGVFGVIALIA VAAYLVGGCAYQRTVMHQRGWRQCPNYSLWAGMLDFIKVSILALIPFRRSRRHEQASYKEFGNARLPVSRMD* |
| Coding | >Ani_SJS100_1|g3820.t1 ATGAAGCCACCCACATCCTCGTTGCTGAGGTTCCTCTTCCTTCTGGCTGCTCCGCTTGTCTCTCATGCTGCCTCC GATTCTTCTGCTCCCAAGGATGGCCTTTCTCCCTGTGTCGTCCGCTCTCCGACGACCGGCCTATTCTACGATCTG AATACCATCTCCTTATCTCCACCCCCGGTAGACGGGGACAAACCTCGCAAAGGCGCCCGAGACGAGAGTTGGCAC GCCAGAGGACACGATTATAATGCCAACTTTACGCTAAACATCTGTGCGCCCGTGGTCGAAGATATCAAGGATGTG GTGGGGGTGGACCGCTCAAGGTGGAGGAATGTTAGCGCCTACTATGAGAGGGAGGGTAAAGTCTACTCCATTGGT CAACAAGCATCAGACCCCTTCTTCCGCGGCCGAAAGCTGGTCATGAACTATACCAATGGCTCCCCTTGTGCCGGC GATTACATCGGAAATGCCGCCCGCACCAAATCCACCATCATGTCGTTCCTGTGTGAGCGCGACACCCCTGCCTCC CAGGCGACGGTCTCCTTTGTCGGCACCATGGACCAGTGCACATATTTCTTCGAGGTGCGAAGCTCTGCCGCTTGT GGCGCTACCGCGCCCACACCGGATAACCCGGGCCTTTCGCCAGGCGGCGTATTCGGCGTAATTGCCTTGATCGCC GTGGCGGCGTACCTAGTCGGTGGTTGCGCATACCAACGAACCGTCATGCACCAGCGCGGTTGGAGACAGTGCCCG AACTACAGTCTTTGGGCGGGAATGCTCGACTTCATCAAAGTAAGTATACTGGCGTTAATTCCGTTCCGACGGTCC CGGCGGCATGAGCAGGCCTCGTACAAGGAGTTTGGCAATGCAAGGTTGCCTGTTTCGAGGATGGATTGA |
| Transcript | >Ani_SJS100_1|g3820.t1 ATGAAGCCACCCACATCCTCGTTGCTGAGGTTCCTCTTCCTTCTGGCTGCTCCGCTTGTCTCTCATGCTGCCTCC GATTCTTCTGCTCCCAAGGATGGCCTTTCTCCCTGTGTCGTCCGCTCTCCGACGACCGGCCTATTCTACGATCTG AATACCATCTCCTTATCTCCACCCCCGGTAGACGGGGACAAACCTCGCAAAGGCGCCCGAGACGAGAGTTGGCAC GCCAGAGGACACGATTATAATGCCAACTTTACGCTAAACATCTGTGCGCCCGTGGTCGAAGATATCAAGGATGTG GTGGGGGTGGACCGCTCAAGGTGGAGGAATGTTAGCGCCTACTATGAGAGGGAGGGTAAAGTCTACTCCATTGGT CAACAAGCATCAGACCCCTTCTTCCGCGGCCGAAAGCTGGTCATGAACTATACCAATGGCTCCCCTTGTGCCGGC GATTACATCGGAAATGCCGCCCGCACCAAATCCACCATCATGTCGTTCCTGTGTGAGCGCGACACCCCTGCCTCC CAGGCGACGGTCTCCTTTGTCGGCACCATGGACCAGTGCACATATTTCTTCGAGGTGCGAAGCTCTGCCGCTTGT GGCGCTACCGCGCCCACACCGGATAACCCGGGCCTTTCGCCAGGCGGCGTATTCGGCGTAATTGCCTTGATCGCC GTGGCGGCGTACCTAGTCGGTGGTTGCGCATACCAACGAACCGTCATGCACCAGCGCGGTTGGAGACAGTGCCCG AACTACAGTCTTTGGGCGGGAATGCTCGACTTCATCAAAGTAAGTATACTGGCGTTAATTCCGTTCCGACGGTCC CGGCGGCATGAGCAGGCCTCGTACAAGGAGTTTGGCAATGCAAGGTTGCCTGTTTCGAGGATGGATTGA |
| Gene | >Ani_SJS100_1|g3820.t1 ATGAAGCCACCCACATCCTCGTTGCTGAGGTTCCTCTTCCTTCTGGCTGCTCCGCTTGTCTCTCATGCTGCCTCC GATTCTTCTGCTCCCAAGGATGGCCTTTCTCCCTGTGTCGTCCGCTCTCCGACGACCGGCCTATTCTACGATCTG AATACCATCTCCTTATCTCCACCCCCGGTAGACGGGGACAAACCTCGCAAAGGCGCCCGAGACGAGAGTTGGCAC GCCAGAGGACACGATTATAATGCCAACTTTACGCTAAACATCTGTGCGCCCGTGGTCGAAGATATCAAGGATGTG GTGGGGGTGGACCGCTCAAGGTGGAGGAATGTTAGCGCCTACTATGAGAGGGAGGGTAAAGTCTACTCCATTGGG TACGGTGACCCTACTTTTCTATACCACTTGCCATAATCACTCGACTGACCCGATGCAGTCAACAAGCATCAGACC CCTTCTTCCGCGGCCGAAAGCTGGTCATGAACTATACCAATGGCTCCCCTTGTGCCGGCGATTACATCGGAAATG CCGCCCGCACCAAATCCACCATCATGTCGTTCCTGTGTGAGCGCGACACCCCTGCCTCCCAGGCGACGGTCTCCT TTGTCGGCACCATGGACCAGTGCACATATTTCTTCGAGGTGCGAAGCTCTGCCGCTTGTGGCGCTACCGCGCCCA CACCGGATAACCCGGGCCTTTCGCCAGGCGGCGTATTCGGCGTAATGTAAGTAGGAAATACCCTACGGTATGGTC AGCGACTAATAAGCACAGTGCCTTGATCGCCGTGGCGGCGTACCTAGTCGGTGGTTGCGCATACCAACGAACCGT CATGCACCAGCGCGGTTGGAGACAGTGCCCGAACTACAGTCTTTGGGCGGGAATGCTCGACTTCATCAAAGTAAG TATACTGGCGTTAATTCCGTTCCGACGGTCCCGGCGGCATGAGCAGGCCTCGTACAAGGAGTTTGGCAATGCAAG GTTGCCTGTTTCGAGGATGGATTGA |