Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g3813.t1
Gene name
Locationscaffold_018:73035..73456
Strand+
Gene length (bp)421
Transcript length (bp)321
Coding sequence length (bp)321
Protein length (aa) 107

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00085 Thioredoxin Thioredoxin 5.0E-27 11 97
PF13098 Thioredoxin_2 Thioredoxin-like domain 2.2E-07 18 95

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g3813.t1
MAVTAIESISDFLTLINSGDVVIIDFWATWCGPCKMISPFFEQLASRPEFSAIKFAKVDVDTQEDISQECGIRAM
PTFIVFKDGQKLDDMAGAHPGGLQGLVQKYA*
Coding >Ani_SJS100_1|g3813.t1
ATGGCTGTCACTGCTATCGAAAGTATCTCCGACTTCCTCACCCTCATCAACTCGGGAGATGTGGTGATCATCGAC
TTCTGGGCTACATGGTGTGGTCCTTGCAAAATGATTAGTCCTTTCTTTGAACAGCTGGCCTCCCGGCCCGAGTTC
AGCGCCATCAAGTTCGCCAAGGTCGACGTCGATACACAGGAGGATATTTCTCAAGAATGTGGAATTAGAGCCATG
CCGACCTTTATAGTATTCAAAGATGGCCAAAAGCTGGACGATATGGCGGGAGCTCACCCCGGTGGCCTGCAAGGT
CTTGTTCAGAAGTATGCGTGA
Transcript >Ani_SJS100_1|g3813.t1
ATGGCTGTCACTGCTATCGAAAGTATCTCCGACTTCCTCACCCTCATCAACTCGGGAGATGTGGTGATCATCGAC
TTCTGGGCTACATGGTGTGGTCCTTGCAAAATGATTAGTCCTTTCTTTGAACAGCTGGCCTCCCGGCCCGAGTTC
AGCGCCATCAAGTTCGCCAAGGTCGACGTCGATACACAGGAGGATATTTCTCAAGAATGTGGAATTAGAGCCATG
CCGACCTTTATAGTATTCAAAGATGGCCAAAAGCTGGACGATATGGCGGGAGCTCACCCCGGTGGCCTGCAAGGT
CTTGTTCAGAAGTATGCGTGA
Gene >Ani_SJS100_1|g3813.t1
ATGGCTGTCACTGCTATCGAAAGGTATGACCTCTAGAAACTTTACAACCATCTCCTAATCTCATTTCCAAAAGAA
AAACAAAAGTGGGTAACTGACCAATCTCCTCCTGTTCTTCTCTACTAGTATCTCCGACTTCCTCACCCTCATCAA
CTCGGGAGATGTGGTGATCATCGACTTCTGGGCTACATGGTGTGGTCCTTGCAAAATGATTAGTCCTTTCTTTGA
ACAGCTGGCCTCCCGGCCCGAGTTCAGCGCCATCAAGTTCGCCAAGGTCGACGTCGATACACAGGAGGATATTTC
TCAAGAATGTGGAATTAGAGCCATGCCGACCTTTATAGTATTCAAAGATGGCCAAAAGCTGGACGATATGGCGGG
AGCTCACCCCGGTGGCCTGCAAGGTCTTGTTCAGAAGTATGCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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