Protein ID | Ani_SJS100_1|g3790.t1 |
Gene name | |
Location | scaffold_018:8727..11473 |
Strand | + |
Gene length (bp) | 2746 |
Transcript length (bp) | 2505 |
Coding sequence length (bp) | 2505 |
Protein length (aa) | 835 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF17285 | PRMT5_TIM | PRMT5 TIM barrel domain | 3.9E-76 | 38 | 364 |
PF05185 | PRMT5 | PRMT5 arginine-N-methyltransferase | 5.3E-67 | 371 | 576 |
PF17286 | PRMT5_C | PRMT5 oligomerisation domain | 2.0E-59 | 579 | 834 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 33 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g3790.t1 MDSFNPEDMAPSFCIGQHESNRKNPITAAIVQAAHESNYDMLTAPITTEAFHSRILTLLGSNPNAPLSQAANGTL MTTDNIRPLFIPPLTPADSHLTPDETMSQIVGVTSSWIDLCSPDPLIADISRQVFMREVAYAAFCGLGYLLIPGP KLHHGDIHAEGVTYYARAIQDAINLAPYIQFHIWMPMVDNPDLEVDGIADLSRLARQEFLGEPLTGQPSRVDPFG TWDAWDIIRRTCKYHSRLVVALSMPKHLPPMSVQSRWYSEPVHLLSFDANTFIKNQKGYPVLSKTHQALIGRFMR LRTSPWILLCDVGPIPGVDEQETSGTKLPALSGSDYPSLTQAAVSNKKHYDPTPHLSYLRNLQQRQPSRSAMERF GVGYQDYLQAPLQPLTVNLESITYEVFEKDPIKYKWYERAVAKALSDWASEGKPTSNPDGRVVVAVVGAGRGPLV SRALQASVETGVKIDLWAVEKNTNAFVLLQRHNEQKWGGQVKLVQSDMRSWKGPQVEKKDDSGAQTGPETAQTSD SAAAPPVTELVPTTIDILISELLGSFGDNELSPECLDGVTHLLNPVHGISIPASYTAHLTPIAAPKLHADVMNQS ISNPAAPETPYVVMLHAIDFLSTNQPSAAALMNSSHGGAKYSARDSISTLPGSGEAPIPFVQTTWSFEHPNQHIP PQLPTTSTISNSHNVRRTRLSFPVYNRGVCHGLAGYFETVLYRDIELSTNPVTMDTKSADMISWFPIYFPLKTPL NVPDNGEVVVTMYRQTDDRKVWYEWMVEVFAVEGNEEEVVMSGGKGTSPAAGNLQRQPQRSRGGRRVRVGTSELH SSIKEGCLM* |
Coding | >Ani_SJS100_1|g3790.t1 ATGGACTCGTTCAATCCAGAAGACATGGCTCCTAGTTTCTGCATCGGACAGCATGAAAGCAACCGCAAGAACCCA ATTACGGCTGCAATTGTACAGGCAGCCCACGAAAGCAATTATGACATGCTCACGGCACCAATTACCACGGAGGCG TTCCATTCTCGTATCCTCACCCTGTTGGGTTCCAACCCAAATGCTCCTCTCTCTCAGGCTGCAAATGGGACTTTG ATGACGACCGATAATATACGCCCCCTCTTTATCCCTCCCTTAACTCCCGCGGATAGCCACTTGACACCGGATGAG ACGATGTCGCAGATAGTTGGAGTCACCAGCAGTTGGATCGATCTATGCTCTCCAGATCCCCTTATTGCGGACATC TCGCGTCAAGTTTTCATGCGGGAGGTCGCTTATGCAGCATTTTGTGGCCTTGGGTACCTCTTGATTCCTGGCCCG AAACTGCACCACGGAGATATCCATGCAGAAGGCGTGACTTACTATGCGAGAGCGATACAGGATGCTATCAACCTC GCTCCGTACATTCAGTTTCACATTTGGATGCCTATGGTCGATAATCCCGATTTGGAAGTAGATGGAATAGCCGAT TTGTCTCGCCTTGCTCGTCAGGAGTTTCTTGGAGAGCCGCTCACAGGGCAGCCATCGCGAGTGGACCCTTTTGGA ACTTGGGATGCTTGGGACATCATACGAAGAACTTGTAAATACCATTCAAGGCTTGTCGTAGCACTTTCAATGCCT AAACACCTCCCTCCCATGTCTGTGCAGTCTCGCTGGTACTCTGAGCCTGTTCATCTGCTCAGCTTTGATGCCAAT ACCTTCATCAAGAACCAGAAAGGCTATCCCGTACTGTCGAAGACACACCAGGCGCTCATCGGTCGGTTTATGCGC CTGCGGACATCCCCATGGATCCTTCTCTGCGACGTTGGCCCAATTCCAGGCGTAGATGAGCAAGAAACTTCAGGA ACAAAACTACCCGCTCTGTCCGGCTCTGATTATCCTAGCCTCACCCAGGCCGCGGTATCTAATAAGAAGCATTAT GACCCGACCCCTCATCTTTCCTACCTCAGAAATCTACAGCAACGCCAGCCTTCTAGGAGCGCCATGGAGAGATTC GGAGTTGGATACCAAGACTATCTCCAGGCGCCCTTGCAGCCGTTGACAGTCAACCTGGAAAGCATTACCTACGAA GTGTTCGAGAAAGATCCTATCAAATACAAATGGTATGAGCGCGCGGTTGCCAAAGCCCTTAGCGACTGGGCAAGT GAAGGAAAGCCAACTTCAAACCCCGACGGCCGGGTGGTTGTGGCTGTTGTTGGTGCGGGTCGAGGACCGCTCGTG TCACGGGCGCTCCAAGCCAGTGTAGAGACTGGGGTTAAGATTGACCTCTGGGCAGTTGAGAAGAACACCAATGCT TTCGTCCTTCTCCAGCGCCACAATGAGCAGAAATGGGGTGGACAAGTCAAGCTTGTTCAATCGGACATGCGAAGC TGGAAAGGGCCGCAGGTTGAGAAGAAGGATGACTCGGGAGCACAAACAGGACCGGAAACGGCACAGACGTCCGAC TCGGCAGCCGCGCCCCCCGTCACCGAGCTCGTTCCCACTACCATTGACATTCTGATCTCAGAGCTGCTGGGCTCG TTCGGCGACAACGAGCTTTCGCCAGAATGCCTCGACGGCGTCACACACCTACTCAATCCGGTTCATGGTATCTCC ATTCCGGCTTCCTATACGGCTCACCTCACGCCCATCGCGGCGCCGAAGCTCCATGCCGATGTCATGAATCAATCC ATCTCTAACCCAGCAGCGCCGGAGACGCCGTATGTGGTCATGTTACACGCGATCGACTTCCTCTCCACGAATCAG CCCTCCGCAGCTGCACTGATGAACTCCAGTCATGGGGGCGCTAAATATAGTGCCCGAGACTCAATCTCCACGCTG CCGGGTTCTGGAGAGGCGCCCATCCCATTCGTGCAGACGACCTGGTCTTTTGAGCATCCTAACCAGCATATACCC CCTCAGTTGCCGACCACGTCGACGATTTCCAACTCGCATAACGTGCGCCGGACCCGCCTGTCATTCCCAGTCTAC AACCGAGGAGTGTGCCATGGTTTGGCAGGGTACTTTGAAACGGTGTTATACCGCGACATTGAGCTGTCGACCAAT CCTGTCACGATGGATACCAAGAGTGCCGACATGATCAGTTGGTTCCCGATCTACTTCCCATTGAAGACTCCTCTA AATGTCCCCGACAATGGCGAAGTGGTGGTGACCATGTACCGGCAAACCGACGACCGCAAGGTATGGTATGAGTGG ATGGTGGAAGTATTTGCAGTGGAAGGCAACGAAGAAGAAGTGGTGATGAGTGGGGGTAAAGGCACGTCTCCAGCG GCTGGCAATCTGCAGCGACAGCCCCAGCGATCACGTGGCGGGCGACGTGTCCGGGTTGGGACGAGCGAGCTGCAC TCCAGCATCAAGGAGGGCTGCCTCATGTGA |
Transcript | >Ani_SJS100_1|g3790.t1 ATGGACTCGTTCAATCCAGAAGACATGGCTCCTAGTTTCTGCATCGGACAGCATGAAAGCAACCGCAAGAACCCA ATTACGGCTGCAATTGTACAGGCAGCCCACGAAAGCAATTATGACATGCTCACGGCACCAATTACCACGGAGGCG TTCCATTCTCGTATCCTCACCCTGTTGGGTTCCAACCCAAATGCTCCTCTCTCTCAGGCTGCAAATGGGACTTTG ATGACGACCGATAATATACGCCCCCTCTTTATCCCTCCCTTAACTCCCGCGGATAGCCACTTGACACCGGATGAG ACGATGTCGCAGATAGTTGGAGTCACCAGCAGTTGGATCGATCTATGCTCTCCAGATCCCCTTATTGCGGACATC TCGCGTCAAGTTTTCATGCGGGAGGTCGCTTATGCAGCATTTTGTGGCCTTGGGTACCTCTTGATTCCTGGCCCG AAACTGCACCACGGAGATATCCATGCAGAAGGCGTGACTTACTATGCGAGAGCGATACAGGATGCTATCAACCTC GCTCCGTACATTCAGTTTCACATTTGGATGCCTATGGTCGATAATCCCGATTTGGAAGTAGATGGAATAGCCGAT TTGTCTCGCCTTGCTCGTCAGGAGTTTCTTGGAGAGCCGCTCACAGGGCAGCCATCGCGAGTGGACCCTTTTGGA ACTTGGGATGCTTGGGACATCATACGAAGAACTTGTAAATACCATTCAAGGCTTGTCGTAGCACTTTCAATGCCT AAACACCTCCCTCCCATGTCTGTGCAGTCTCGCTGGTACTCTGAGCCTGTTCATCTGCTCAGCTTTGATGCCAAT ACCTTCATCAAGAACCAGAAAGGCTATCCCGTACTGTCGAAGACACACCAGGCGCTCATCGGTCGGTTTATGCGC CTGCGGACATCCCCATGGATCCTTCTCTGCGACGTTGGCCCAATTCCAGGCGTAGATGAGCAAGAAACTTCAGGA ACAAAACTACCCGCTCTGTCCGGCTCTGATTATCCTAGCCTCACCCAGGCCGCGGTATCTAATAAGAAGCATTAT GACCCGACCCCTCATCTTTCCTACCTCAGAAATCTACAGCAACGCCAGCCTTCTAGGAGCGCCATGGAGAGATTC GGAGTTGGATACCAAGACTATCTCCAGGCGCCCTTGCAGCCGTTGACAGTCAACCTGGAAAGCATTACCTACGAA GTGTTCGAGAAAGATCCTATCAAATACAAATGGTATGAGCGCGCGGTTGCCAAAGCCCTTAGCGACTGGGCAAGT GAAGGAAAGCCAACTTCAAACCCCGACGGCCGGGTGGTTGTGGCTGTTGTTGGTGCGGGTCGAGGACCGCTCGTG TCACGGGCGCTCCAAGCCAGTGTAGAGACTGGGGTTAAGATTGACCTCTGGGCAGTTGAGAAGAACACCAATGCT TTCGTCCTTCTCCAGCGCCACAATGAGCAGAAATGGGGTGGACAAGTCAAGCTTGTTCAATCGGACATGCGAAGC TGGAAAGGGCCGCAGGTTGAGAAGAAGGATGACTCGGGAGCACAAACAGGACCGGAAACGGCACAGACGTCCGAC TCGGCAGCCGCGCCCCCCGTCACCGAGCTCGTTCCCACTACCATTGACATTCTGATCTCAGAGCTGCTGGGCTCG TTCGGCGACAACGAGCTTTCGCCAGAATGCCTCGACGGCGTCACACACCTACTCAATCCGGTTCATGGTATCTCC ATTCCGGCTTCCTATACGGCTCACCTCACGCCCATCGCGGCGCCGAAGCTCCATGCCGATGTCATGAATCAATCC ATCTCTAACCCAGCAGCGCCGGAGACGCCGTATGTGGTCATGTTACACGCGATCGACTTCCTCTCCACGAATCAG CCCTCCGCAGCTGCACTGATGAACTCCAGTCATGGGGGCGCTAAATATAGTGCCCGAGACTCAATCTCCACGCTG CCGGGTTCTGGAGAGGCGCCCATCCCATTCGTGCAGACGACCTGGTCTTTTGAGCATCCTAACCAGCATATACCC CCTCAGTTGCCGACCACGTCGACGATTTCCAACTCGCATAACGTGCGCCGGACCCGCCTGTCATTCCCAGTCTAC AACCGAGGAGTGTGCCATGGTTTGGCAGGGTACTTTGAAACGGTGTTATACCGCGACATTGAGCTGTCGACCAAT CCTGTCACGATGGATACCAAGAGTGCCGACATGATCAGTTGGTTCCCGATCTACTTCCCATTGAAGACTCCTCTA AATGTCCCCGACAATGGCGAAGTGGTGGTGACCATGTACCGGCAAACCGACGACCGCAAGGTATGGTATGAGTGG ATGGTGGAAGTATTTGCAGTGGAAGGCAACGAAGAAGAAGTGGTGATGAGTGGGGGTAAAGGCACGTCTCCAGCG GCTGGCAATCTGCAGCGACAGCCCCAGCGATCACGTGGCGGGCGACGTGTCCGGGTTGGGACGAGCGAGCTGCAC TCCAGCATCAAGGAGGGCTGCCTCATGTGA |
Gene | >Ani_SJS100_1|g3790.t1 ATGGACTCGTTCAATCCAGAAGACATGGCTCCTAGTTTCTGCATCGGACAGCATGAAAGCAACCGCAAGAACCCA ATTACGGCTGCAATTGTACAGGCAGCCCACGAAAGCAATGTACGCATATTCTCGTGCTGAATTGCCGGCTCATAT GCTAACTTGGATCACTCAGTATGACATGCTCACGGCACCAATTACCACGGAGGCGTTCCATTCTCGTATCCTCAC CCTGTTGGGTTCCAACCCAAATGCTCCTCTCTCTCAGGCTGCAAATGGGACTTTGATGACGACCGATAATATACG CCCCCTCTTTATCCCTCCCTTAACTCCCGCGGATAGCCACTTGACACCGGATGAGACGATGTCGCAGATAGTTGG AGTCACCAGCAGTTGGATCGATCTATGCTCTCCAGATCCCCTTATTGCGGACATCTCGCGTCAAGTTTTCATGCG GGAGGTCGCTTATGCAGCATTTTGTGGCCTTGGGTACCTCTTGATTCCTGGCCCGAAACTGCACCACGGAGATAT CCATGCAGAAGGCGTGACTTACTATGCGAGAGCGATACAGGATGCTATCAACCTCGCTCCGTACATTCAGTTTCA CATTTGGATGCCTATGGTCGATAATCCCGATTTGGAAGTAGATGGAATAGCCGATTTGTCTCGCCTTGCTCGTCA GGAGTTTCTTGGAGAGCCGCTCACAGGGCAGCCATCGCGAGTGGACCCTTTTGGAACTTGGGATGCTTGGGACAT CATACGAAGAACTTGTAAATACCATTCAAGGCTTGTCGTAGGTAAGATAATATCCCACGGTCTTAACGTTTTGCG TCTCCTACCTGCGGCTAAGACAATGTTGTTAGCACTTTCAATGCCTAAACACCTCCCTCCCATGTCTGTGCAGTC TCGCTGGTACTCTGAGCCTGTTCATCTGCTCAGCTTTGATGCCAATACCTTCATCAAGAACCAGAAAGGCTATCC CGTACTGTCGAAGACACACCAGGCGCTCATCGGTCGGTTTATGCGCCTGCGGACATCCCCATGGATCCTTCTCTG CGACGTTGGCCCAATTCCAGGCGTAGATGAGCAAGAAACTTCAGGAACAAAACTACCCGCTCTGTCCGGCTCTGA TTATCCTAGCCTCACCCAGGCCGCGGTATCTAATAAGAAGCATTATGACCCGACCCCTCATCTTTCCTACCTCAG AAATCTACAGCAACGCCAGCCTTCTAGGAGCGCCATGGAGAGATTCGGAGTTGGATACCAAGACTATCTCCAGGC GCCCTTGCAGCCGTTGACAGTCAACCTGGAAAGCATTACCTACGAAGTGTTCGAGAAAGATCCTATCAAATACAA ATGGTATGAGCGCGCGGTTGCCAAAGCCCTTAGCGACTGGGCAAGTGAAGGAAAGCCAACTTCAAACCCCGACGG CCGGGTGGTTGTGGCTGTTGTTGGTGCGGGTCGAGGACCGCTCGTGTCACGGGCGCTCCAAGCCAGTGTAGAGAC TGGGGTTAAGATTGACCTCTGGGCAGTTGAGAAGAACACCAATGCTTTCGTCCTTCTCCAGCGCCACAATGAGCA GAAATGGGGTGGACAAGTCAAGCTTGTTCAATCGGACATGCGAAGCTGGAAAGGGCCGCAGGTTGAGAAGAAGGA TGACTCGGGAGCACAAACAGGACCGGTAGGGCAATCCCTTGGAATCGAGAATTCCTTACTGTACAATGCCAACGA GGAGCAGGAAACGGCACAGACGTCCGACTCGGCAGCCGCGCCCCCCGTCACCGAGCTCGTTCCCACTACCATTGA CATTCTGATCTCAGAGCTGCTGGGCTCGTTCGGCGACAACGAGCTTTCGCCAGAATGCCTCGACGGCGTCACACA CCTACTCAATCCGGTTCATGGTATCTCCATTCCGGCTTCCTATACGGCTCACCTCACGCCCATCGCGGCGCCGAA GCTCCATGCCGATGTCATGAATCAATCCATCTCTAACCCAGCAGCGCCGGAGACGCCGTATGTGGTCATGTTACA CGCGATCGACTTCCTCTCCACGAATCAGCCCTCCGCAGCTGCACTGATGAACTCCAGTCATGGGGGCGCTAAATA TAGTGCCCGAGACTCAATCTCCACGCTGCCGGGTTCTGGAGAGGCGCCCATCCCATTCGTGCAGACGACCTGGTC TTTTGAGCATCCTAACCAGCATATACCCCCTCAGTTGCCGACCACGTCGACGATTTCCAACTCGCATAACGTGCG CCGGACCCGCCTGTCATTCCCAGTCTACAACCGAGGAGTGTGCCATGGTTTGGCAGGGTACTTTGAAACGGTGTT ATACCGCGACATTGAGCTGTCGACCAATCCTGTCACGATGGATACCAAGAGTGCCGACATGATCAGTTGGTTCCC GATCTACTTCCCATTGAAGGTCTGCATTCCTACATACGTATAAGAACTACAACGCCGGATGCTAACAGTATGCTA TCTACAGACTCCTCTAAATGTCCCCGACAATGGCGAAGTGGTGGTGACCATGTACCGGCAAACCGACGACCGCAA GGTATGGTATGAGTGGATGGTGGAAGTATTTGCAGTGGAAGGCAACGAAGAAGAAGTGGTGATGAGTGGGGGTAA AGGCACGTCTCCAGCGGCTGGCAATCTGCAGCGACAGCCCCAGCGATCACGTGGCGGGCGACGTGTCCGGGTTGG GACGAGCGAGCTGCACTCCAGCATCAAGGAGGGCTGCCTCATGTGA |