Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g375.t1
Gene name
Locationscaffold_001:1238731..1239322
Strand-
Gene length (bp)591
Transcript length (bp)543
Coding sequence length (bp)543
Protein length (aa) 181

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g375.t1
MHFSSLLVASALCLTPAVYGYGVAQVTVKSHEDCDPGAPANDKLIGDAETTYATEDTCEKAKISHSLSIDAYSVS
LQDVTKDTSERCHGLGVYANDQCIGVPNAVVPFYPGEEDAESGCIPDDPFDKYVYVRLLCDGGDGNADDLKKVES
HNPAEDLAKDPNDTENNGGGNILGGLGLGL*
Coding >Ani_SJS100_1|g375.t1
ATGCATTTCTCCAGCCTCCTCGTCGCCTCGGCCCTCTGCCTGACCCCAGCCGTATACGGCTATGGCGTGGCCCAA
GTCACAGTGAAGTCCCACGAAGATTGCGACCCTGGCGCTCCCGCCAATGACAAGCTTATTGGAGATGCCGAAACC
ACGTACGCCACCGAAGATACTTGCGAAAAGGCCAAGATCTCGCACAGCCTGTCAATCGATGCCTACTCGGTGAGC
CTTCAAGACGTCACCAAAGATACCTCTGAGCGCTGCCATGGTCTGGGTGTCTATGCGAATGACCAGTGCATTGGC
GTCCCCAACGCAGTGGTTCCCTTCTACCCGGGAGAGGAGGATGCCGAGAGCGGCTGCATCCCGGATGACCCGTTC
GACAAATACGTCTACGTCAGGCTACTGTGTGATGGGGGTGACGGTAACGCGGATGACCTGAAGAAAGTGGAATCG
CACAACCCTGCCGAAGATCTCGCCAAGGACCCTAACGATACTGAGAACAATGGCGGCGGCAACATACTCGGCGGG
CTTGGTCTTGGTTTGTAG
Transcript >Ani_SJS100_1|g375.t1
ATGCATTTCTCCAGCCTCCTCGTCGCCTCGGCCCTCTGCCTGACCCCAGCCGTATACGGCTATGGCGTGGCCCAA
GTCACAGTGAAGTCCCACGAAGATTGCGACCCTGGCGCTCCCGCCAATGACAAGCTTATTGGAGATGCCGAAACC
ACGTACGCCACCGAAGATACTTGCGAAAAGGCCAAGATCTCGCACAGCCTGTCAATCGATGCCTACTCGGTGAGC
CTTCAAGACGTCACCAAAGATACCTCTGAGCGCTGCCATGGTCTGGGTGTCTATGCGAATGACCAGTGCATTGGC
GTCCCCAACGCAGTGGTTCCCTTCTACCCGGGAGAGGAGGATGCCGAGAGCGGCTGCATCCCGGATGACCCGTTC
GACAAATACGTCTACGTCAGGCTACTGTGTGATGGGGGTGACGGTAACGCGGATGACCTGAAGAAAGTGGAATCG
CACAACCCTGCCGAAGATCTCGCCAAGGACCCTAACGATACTGAGAACAATGGCGGCGGCAACATACTCGGCGGG
CTTGGTCTTGGTTTGTAG
Gene >Ani_SJS100_1|g375.t1
ATGCATTTCTCCAGCGTAAGTATCGCTCATCCATACACCCACACCATGGCTAATTGATACCAGCTCCTCGTCGCC
TCGGCCCTCTGCCTGACCCCAGCCGTATACGGCTATGGCGTGGCCCAAGTCACAGTGAAGTCCCACGAAGATTGC
GACCCTGGCGCTCCCGCCAATGACAAGCTTATTGGAGATGCCGAAACCACGTACGCCACCGAAGATACTTGCGAA
AAGGCCAAGATCTCGCACAGCCTGTCAATCGATGCCTACTCGGTGAGCCTTCAAGACGTCACCAAAGATACCTCT
GAGCGCTGCCATGGTCTGGGTGTCTATGCGAATGACCAGTGCATTGGCGTCCCCAACGCAGTGGTTCCCTTCTAC
CCGGGAGAGGAGGATGCCGAGAGCGGCTGCATCCCGGATGACCCGTTCGACAAATACGTCTACGTCAGGCTACTG
TGTGATGGGGGTGACGGTAACGCGGATGACCTGAAGAAAGTGGAATCGCACAACCCTGCCGAAGATCTCGCCAAG
GACCCTAACGATACTGAGAACAATGGCGGCGGCAACATACTCGGCGGGCTTGGTCTTGGTTTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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