Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g3716.t1
Gene name
Locationscaffold_017:265498..266752
Strand-
Gene length (bp)1254
Transcript length (bp)1254
Coding sequence length (bp)1254
Protein length (aa) 418

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13516 LRR_6 Leucine Rich repeat 2.0E+00 251 272
PF13516 LRR_6 Leucine Rich repeat 4.1E-03 279 300

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 48 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g3716.t1
MAPPKVFSIEGKGLKLDTAEDIESHIKPLLEATDYTEIRFGGNTLGVPACERLAAVLSTQKSLEVAELADIFTSR
LLSEIPDALTFLLNALLEITTLHTVNLSDNAFGANTQKPLVDFLARHTPLRHLILNNNGMGPEAGSNIAKALTEL
AQRKEEARKEGKEVPLLESIVCGRNRLENGSMAAWARAYEVHAVGMRSVKMTQNGIRQEGISMLLKDGLRHCSAL
EVLDLQDNTFTIMGSTALAGVVSSWPSLRELGVSDCLLSGRGGVKVAQALAEAKNQKVQTLRLQYNEITAEGVKQ
FLHATKTALPALRRIELNGNIFNEDDNNVTELREILEARQEEHGQDDDPEDMWGVDELDELEEEESEEEEEEEEE
EEEEEKAEKLVKDDEQAENEKVSQKKDDDVDKLADVLGKTGL*
Coding >Ani_SJS100_1|g3716.t1
ATGGCCCCTCCCAAGGTCTTCTCTATCGAGGGCAAAGGCCTCAAGCTCGATACCGCTGAGGATATCGAGTCCCAT
ATCAAGCCTCTTCTCGAAGCCACCGACTACACTGAGATCCGCTTCGGAGGAAACACTCTGGGTGTGCCTGCTTGC
GAGCGTCTCGCCGCTGTGCTTTCTACACAAAAGAGCCTCGAAGTGGCTGAACTTGCCGACATCTTCACCTCTCGT
CTGCTGAGCGAAATCCCCGACGCTCTGACATTCCTCCTCAATGCCCTTCTCGAAATCACGACCCTTCACACCGTC
AACCTCTCCGACAATGCCTTCGGCGCCAACACCCAGAAGCCCCTCGTCGACTTCCTCGCTCGCCACACCCCGCTC
CGCCACCTGATCCTCAACAACAACGGCATGGGTCCCGAGGCTGGTTCGAACATTGCGAAGGCACTCACGGAGCTG
GCTCAGCGCAAGGAGGAGGCCCGTAAGGAGGGCAAGGAGGTCCCTCTTCTCGAGAGCATCGTCTGCGGTCGCAAT
CGCTTGGAGAACGGCAGTATGGCGGCTTGGGCACGTGCCTATGAGGTGCACGCTGTCGGCATGCGCTCCGTCAAG
ATGACACAGAACGGTATCCGTCAGGAGGGTATCTCTATGCTGCTGAAGGATGGTCTTCGCCACTGCTCTGCTTTG
GAGGTGCTCGACTTGCAGGACAACACTTTCACCATCATGGGCTCCACCGCCCTGGCTGGTGTAGTCTCCAGCTGG
CCCTCTCTCCGTGAGCTCGGTGTCAGTGACTGCTTGCTGTCGGGCCGTGGTGGCGTCAAGGTCGCTCAGGCTCTG
GCTGAGGCCAAGAATCAGAAGGTCCAGACGCTGCGTCTGCAGTACAACGAGATCACCGCCGAGGGTGTCAAGCAG
TTCCTGCACGCCACCAAGACTGCTCTTCCTGCCTTGCGTCGCATTGAGCTGAACGGCAACATCTTCAACGAGGAT
GACAACAACGTGACGGAACTGCGCGAGATTCTGGAGGCCCGTCAGGAGGAGCACGGCCAGGATGATGACCCGGAG
GATATGTGGGGTGTCGACGAGCTGGACGAACTCGAGGAGGAGGAGAGCGAGGAGGAGGAGGAGGAGGAAGAAGAG
GAGGAAGAGGAAGAGAAGGCCGAGAAGCTTGTCAAGGACGACGAGCAGGCGGAGAACGAAAAGGTTTCCCAGAAG
AAGGACGACGATGTTGACAAGCTTGCCGACGTCTTGGGCAAAACCGGTCTGTAG
Transcript >Ani_SJS100_1|g3716.t1
ATGGCCCCTCCCAAGGTCTTCTCTATCGAGGGCAAAGGCCTCAAGCTCGATACCGCTGAGGATATCGAGTCCCAT
ATCAAGCCTCTTCTCGAAGCCACCGACTACACTGAGATCCGCTTCGGAGGAAACACTCTGGGTGTGCCTGCTTGC
GAGCGTCTCGCCGCTGTGCTTTCTACACAAAAGAGCCTCGAAGTGGCTGAACTTGCCGACATCTTCACCTCTCGT
CTGCTGAGCGAAATCCCCGACGCTCTGACATTCCTCCTCAATGCCCTTCTCGAAATCACGACCCTTCACACCGTC
AACCTCTCCGACAATGCCTTCGGCGCCAACACCCAGAAGCCCCTCGTCGACTTCCTCGCTCGCCACACCCCGCTC
CGCCACCTGATCCTCAACAACAACGGCATGGGTCCCGAGGCTGGTTCGAACATTGCGAAGGCACTCACGGAGCTG
GCTCAGCGCAAGGAGGAGGCCCGTAAGGAGGGCAAGGAGGTCCCTCTTCTCGAGAGCATCGTCTGCGGTCGCAAT
CGCTTGGAGAACGGCAGTATGGCGGCTTGGGCACGTGCCTATGAGGTGCACGCTGTCGGCATGCGCTCCGTCAAG
ATGACACAGAACGGTATCCGTCAGGAGGGTATCTCTATGCTGCTGAAGGATGGTCTTCGCCACTGCTCTGCTTTG
GAGGTGCTCGACTTGCAGGACAACACTTTCACCATCATGGGCTCCACCGCCCTGGCTGGTGTAGTCTCCAGCTGG
CCCTCTCTCCGTGAGCTCGGTGTCAGTGACTGCTTGCTGTCGGGCCGTGGTGGCGTCAAGGTCGCTCAGGCTCTG
GCTGAGGCCAAGAATCAGAAGGTCCAGACGCTGCGTCTGCAGTACAACGAGATCACCGCCGAGGGTGTCAAGCAG
TTCCTGCACGCCACCAAGACTGCTCTTCCTGCCTTGCGTCGCATTGAGCTGAACGGCAACATCTTCAACGAGGAT
GACAACAACGTGACGGAACTGCGCGAGATTCTGGAGGCCCGTCAGGAGGAGCACGGCCAGGATGATGACCCGGAG
GATATGTGGGGTGTCGACGAGCTGGACGAACTCGAGGAGGAGGAGAGCGAGGAGGAGGAGGAGGAGGAAGAAGAG
GAGGAAGAGGAAGAGAAGGCCGAGAAGCTTGTCAAGGACGACGAGCAGGCGGAGAACGAAAAGGTTTCCCAGAAG
AAGGACGACGATGTTGACAAGCTTGCCGACGTCTTGGGCAAAACCGGTCTGTAG
Gene >Ani_SJS100_1|g3716.t1
ATGGCCCCTCCCAAGGTCTTCTCTATCGAGGGCAAAGGCCTCAAGCTCGATACCGCTGAGGATATCGAGTCCCAT
ATCAAGCCTCTTCTCGAAGCCACCGACTACACTGAGATCCGCTTCGGAGGAAACACTCTGGGTGTGCCTGCTTGC
GAGCGTCTCGCCGCTGTGCTTTCTACACAAAAGAGCCTCGAAGTGGCTGAACTTGCCGACATCTTCACCTCTCGT
CTGCTGAGCGAAATCCCCGACGCTCTGACATTCCTCCTCAATGCCCTTCTCGAAATCACGACCCTTCACACCGTC
AACCTCTCCGACAATGCCTTCGGCGCCAACACCCAGAAGCCCCTCGTCGACTTCCTCGCTCGCCACACCCCGCTC
CGCCACCTGATCCTCAACAACAACGGCATGGGTCCCGAGGCTGGTTCGAACATTGCGAAGGCACTCACGGAGCTG
GCTCAGCGCAAGGAGGAGGCCCGTAAGGAGGGCAAGGAGGTCCCTCTTCTCGAGAGCATCGTCTGCGGTCGCAAT
CGCTTGGAGAACGGCAGTATGGCGGCTTGGGCACGTGCCTATGAGGTGCACGCTGTCGGCATGCGCTCCGTCAAG
ATGACACAGAACGGTATCCGTCAGGAGGGTATCTCTATGCTGCTGAAGGATGGTCTTCGCCACTGCTCTGCTTTG
GAGGTGCTCGACTTGCAGGACAACACTTTCACCATCATGGGCTCCACCGCCCTGGCTGGTGTAGTCTCCAGCTGG
CCCTCTCTCCGTGAGCTCGGTGTCAGTGACTGCTTGCTGTCGGGCCGTGGTGGCGTCAAGGTCGCTCAGGCTCTG
GCTGAGGCCAAGAATCAGAAGGTCCAGACGCTGCGTCTGCAGTACAACGAGATCACCGCCGAGGGTGTCAAGCAG
TTCCTGCACGCCACCAAGACTGCTCTTCCTGCCTTGCGTCGCATTGAGCTGAACGGCAACATCTTCAACGAGGAT
GACAACAACGTGACGGAACTGCGCGAGATTCTGGAGGCCCGTCAGGAGGAGCACGGCCAGGATGATGACCCGGAG
GATATGTGGGGTGTCGACGAGCTGGACGAACTCGAGGAGGAGGAGAGCGAGGAGGAGGAGGAGGAGGAAGAAGAG
GAGGAAGAGGAAGAGAAGGCCGAGAAGCTTGTCAAGGACGACGAGCAGGCGGAGAACGAAAAGGTTTCCCAGAAG
AAGGACGACGATGTTGACAAGCTTGCCGACGTCTTGGGCAAAACCGGTCTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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