Protein ID | Ani_SJS100_1|g3716.t1 |
Gene name | |
Location | scaffold_017:265498..266752 |
Strand | - |
Gene length (bp) | 1254 |
Transcript length (bp) | 1254 |
Coding sequence length (bp) | 1254 |
Protein length (aa) | 418 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13516 | LRR_6 | Leucine Rich repeat | 2.0E+00 | 251 | 272 |
PF13516 | LRR_6 | Leucine Rich repeat | 4.1E-03 | 279 | 300 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0005488 | binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 48 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g3716.t1 MAPPKVFSIEGKGLKLDTAEDIESHIKPLLEATDYTEIRFGGNTLGVPACERLAAVLSTQKSLEVAELADIFTSR LLSEIPDALTFLLNALLEITTLHTVNLSDNAFGANTQKPLVDFLARHTPLRHLILNNNGMGPEAGSNIAKALTEL AQRKEEARKEGKEVPLLESIVCGRNRLENGSMAAWARAYEVHAVGMRSVKMTQNGIRQEGISMLLKDGLRHCSAL EVLDLQDNTFTIMGSTALAGVVSSWPSLRELGVSDCLLSGRGGVKVAQALAEAKNQKVQTLRLQYNEITAEGVKQ FLHATKTALPALRRIELNGNIFNEDDNNVTELREILEARQEEHGQDDDPEDMWGVDELDELEEEESEEEEEEEEE EEEEEKAEKLVKDDEQAENEKVSQKKDDDVDKLADVLGKTGL* |
Coding | >Ani_SJS100_1|g3716.t1 ATGGCCCCTCCCAAGGTCTTCTCTATCGAGGGCAAAGGCCTCAAGCTCGATACCGCTGAGGATATCGAGTCCCAT ATCAAGCCTCTTCTCGAAGCCACCGACTACACTGAGATCCGCTTCGGAGGAAACACTCTGGGTGTGCCTGCTTGC GAGCGTCTCGCCGCTGTGCTTTCTACACAAAAGAGCCTCGAAGTGGCTGAACTTGCCGACATCTTCACCTCTCGT CTGCTGAGCGAAATCCCCGACGCTCTGACATTCCTCCTCAATGCCCTTCTCGAAATCACGACCCTTCACACCGTC AACCTCTCCGACAATGCCTTCGGCGCCAACACCCAGAAGCCCCTCGTCGACTTCCTCGCTCGCCACACCCCGCTC CGCCACCTGATCCTCAACAACAACGGCATGGGTCCCGAGGCTGGTTCGAACATTGCGAAGGCACTCACGGAGCTG GCTCAGCGCAAGGAGGAGGCCCGTAAGGAGGGCAAGGAGGTCCCTCTTCTCGAGAGCATCGTCTGCGGTCGCAAT CGCTTGGAGAACGGCAGTATGGCGGCTTGGGCACGTGCCTATGAGGTGCACGCTGTCGGCATGCGCTCCGTCAAG ATGACACAGAACGGTATCCGTCAGGAGGGTATCTCTATGCTGCTGAAGGATGGTCTTCGCCACTGCTCTGCTTTG GAGGTGCTCGACTTGCAGGACAACACTTTCACCATCATGGGCTCCACCGCCCTGGCTGGTGTAGTCTCCAGCTGG CCCTCTCTCCGTGAGCTCGGTGTCAGTGACTGCTTGCTGTCGGGCCGTGGTGGCGTCAAGGTCGCTCAGGCTCTG GCTGAGGCCAAGAATCAGAAGGTCCAGACGCTGCGTCTGCAGTACAACGAGATCACCGCCGAGGGTGTCAAGCAG TTCCTGCACGCCACCAAGACTGCTCTTCCTGCCTTGCGTCGCATTGAGCTGAACGGCAACATCTTCAACGAGGAT GACAACAACGTGACGGAACTGCGCGAGATTCTGGAGGCCCGTCAGGAGGAGCACGGCCAGGATGATGACCCGGAG GATATGTGGGGTGTCGACGAGCTGGACGAACTCGAGGAGGAGGAGAGCGAGGAGGAGGAGGAGGAGGAAGAAGAG GAGGAAGAGGAAGAGAAGGCCGAGAAGCTTGTCAAGGACGACGAGCAGGCGGAGAACGAAAAGGTTTCCCAGAAG AAGGACGACGATGTTGACAAGCTTGCCGACGTCTTGGGCAAAACCGGTCTGTAG |
Transcript | >Ani_SJS100_1|g3716.t1 ATGGCCCCTCCCAAGGTCTTCTCTATCGAGGGCAAAGGCCTCAAGCTCGATACCGCTGAGGATATCGAGTCCCAT ATCAAGCCTCTTCTCGAAGCCACCGACTACACTGAGATCCGCTTCGGAGGAAACACTCTGGGTGTGCCTGCTTGC GAGCGTCTCGCCGCTGTGCTTTCTACACAAAAGAGCCTCGAAGTGGCTGAACTTGCCGACATCTTCACCTCTCGT CTGCTGAGCGAAATCCCCGACGCTCTGACATTCCTCCTCAATGCCCTTCTCGAAATCACGACCCTTCACACCGTC AACCTCTCCGACAATGCCTTCGGCGCCAACACCCAGAAGCCCCTCGTCGACTTCCTCGCTCGCCACACCCCGCTC CGCCACCTGATCCTCAACAACAACGGCATGGGTCCCGAGGCTGGTTCGAACATTGCGAAGGCACTCACGGAGCTG GCTCAGCGCAAGGAGGAGGCCCGTAAGGAGGGCAAGGAGGTCCCTCTTCTCGAGAGCATCGTCTGCGGTCGCAAT CGCTTGGAGAACGGCAGTATGGCGGCTTGGGCACGTGCCTATGAGGTGCACGCTGTCGGCATGCGCTCCGTCAAG ATGACACAGAACGGTATCCGTCAGGAGGGTATCTCTATGCTGCTGAAGGATGGTCTTCGCCACTGCTCTGCTTTG GAGGTGCTCGACTTGCAGGACAACACTTTCACCATCATGGGCTCCACCGCCCTGGCTGGTGTAGTCTCCAGCTGG CCCTCTCTCCGTGAGCTCGGTGTCAGTGACTGCTTGCTGTCGGGCCGTGGTGGCGTCAAGGTCGCTCAGGCTCTG GCTGAGGCCAAGAATCAGAAGGTCCAGACGCTGCGTCTGCAGTACAACGAGATCACCGCCGAGGGTGTCAAGCAG TTCCTGCACGCCACCAAGACTGCTCTTCCTGCCTTGCGTCGCATTGAGCTGAACGGCAACATCTTCAACGAGGAT GACAACAACGTGACGGAACTGCGCGAGATTCTGGAGGCCCGTCAGGAGGAGCACGGCCAGGATGATGACCCGGAG GATATGTGGGGTGTCGACGAGCTGGACGAACTCGAGGAGGAGGAGAGCGAGGAGGAGGAGGAGGAGGAAGAAGAG GAGGAAGAGGAAGAGAAGGCCGAGAAGCTTGTCAAGGACGACGAGCAGGCGGAGAACGAAAAGGTTTCCCAGAAG AAGGACGACGATGTTGACAAGCTTGCCGACGTCTTGGGCAAAACCGGTCTGTAG |
Gene | >Ani_SJS100_1|g3716.t1 ATGGCCCCTCCCAAGGTCTTCTCTATCGAGGGCAAAGGCCTCAAGCTCGATACCGCTGAGGATATCGAGTCCCAT ATCAAGCCTCTTCTCGAAGCCACCGACTACACTGAGATCCGCTTCGGAGGAAACACTCTGGGTGTGCCTGCTTGC GAGCGTCTCGCCGCTGTGCTTTCTACACAAAAGAGCCTCGAAGTGGCTGAACTTGCCGACATCTTCACCTCTCGT CTGCTGAGCGAAATCCCCGACGCTCTGACATTCCTCCTCAATGCCCTTCTCGAAATCACGACCCTTCACACCGTC AACCTCTCCGACAATGCCTTCGGCGCCAACACCCAGAAGCCCCTCGTCGACTTCCTCGCTCGCCACACCCCGCTC CGCCACCTGATCCTCAACAACAACGGCATGGGTCCCGAGGCTGGTTCGAACATTGCGAAGGCACTCACGGAGCTG GCTCAGCGCAAGGAGGAGGCCCGTAAGGAGGGCAAGGAGGTCCCTCTTCTCGAGAGCATCGTCTGCGGTCGCAAT CGCTTGGAGAACGGCAGTATGGCGGCTTGGGCACGTGCCTATGAGGTGCACGCTGTCGGCATGCGCTCCGTCAAG ATGACACAGAACGGTATCCGTCAGGAGGGTATCTCTATGCTGCTGAAGGATGGTCTTCGCCACTGCTCTGCTTTG GAGGTGCTCGACTTGCAGGACAACACTTTCACCATCATGGGCTCCACCGCCCTGGCTGGTGTAGTCTCCAGCTGG CCCTCTCTCCGTGAGCTCGGTGTCAGTGACTGCTTGCTGTCGGGCCGTGGTGGCGTCAAGGTCGCTCAGGCTCTG GCTGAGGCCAAGAATCAGAAGGTCCAGACGCTGCGTCTGCAGTACAACGAGATCACCGCCGAGGGTGTCAAGCAG TTCCTGCACGCCACCAAGACTGCTCTTCCTGCCTTGCGTCGCATTGAGCTGAACGGCAACATCTTCAACGAGGAT GACAACAACGTGACGGAACTGCGCGAGATTCTGGAGGCCCGTCAGGAGGAGCACGGCCAGGATGATGACCCGGAG GATATGTGGGGTGTCGACGAGCTGGACGAACTCGAGGAGGAGGAGAGCGAGGAGGAGGAGGAGGAGGAAGAAGAG GAGGAAGAGGAAGAGAAGGCCGAGAAGCTTGTCAAGGACGACGAGCAGGCGGAGAACGAAAAGGTTTCCCAGAAG AAGGACGACGATGTTGACAAGCTTGCCGACGTCTTGGGCAAAACCGGTCTGTAG |