© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g3703.t1 |
| Gene name | |
| Location | scaffold_017:223255..224525 |
| Strand | + |
| Gene length (bp) | 1270 |
| Transcript length (bp) | 804 |
| Coding sequence length (bp) | 804 |
| Protein length (aa) | 268 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 20 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 5 | 24 | 19 |
| 2 | 37 | 59 | 22 |
| 3 | 79 | 101 | 22 |
| 4 | 113 | 144 | 31 |
| 5 | 164 | 186 | 22 |
| 6 | 193 | 215 | 22 |
| 7 | 230 | 252 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g3703.t1 MYALPVGIVFLCLATVTVALRLYTRLKLVRKPGWDDLLIVLSLATDVVFFAFLVIEIQNGLAENEADLAPEVVRR QLKALWITIPLYNLTLTLTKLSLIFLYRRLFPTHTYRILLILTLIFVIITGLWMVLSTLIFCIPINAFWDTSIPH TCLPEDVVWCLNAAFQITTDLILVVLPLPILANLNLPKRQKAALLVIFALGFFVCATSIVRLSTIVHLLRDPDFT SGNGLAATWSFVESNVAIICACLPPLRPLLQQKQPQANHHQR* |
| Coding | >Ani_SJS100_1|g3703.t1 ATGTATGCCCTGCCCGTGGGAATCGTTTTCCTTTGCCTGGCGACGGTCACGGTCGCGTTGCGACTGTATACGCGA TTGAAACTGGTGAGGAAACCGGGATGGGATGATTTGTTGATTGTGTTGTCGTTGGCGACTGATGTGGTGTTCTTC GCTTTCCTTGTCATAGAAATCCAAAACGGCCTCGCCGAAAACGAAGCAGATCTTGCTCCGGAGGTGGTGAGGAGG CAATTAAAGGCCCTCTGGATAACAATCCCCCTCTACAACCTGACCCTCACCCTCACCAAGTTATCCCTAATCTTC CTCTACCGCCGCCTCTTCCCAACCCACACCTACCGCATCCTCCTCATCCTCACCCTCATCTTCGTCATCATAACC GGCCTCTGGATGGTCCTCAGCACCTTGATCTTCTGCATCCCCATAAACGCCTTCTGGGATACGTCTATCCCGCAT ACATGTCTCCCCGAGGATGTAGTATGGTGTCTGAACGCCGCGTTCCAGATCACCACTGATCTGATACTCGTTGTG CTTCCCTTGCCCATCCTGGCGAATTTAAATCTGCCGAAAAGGCAGAAGGCCGCGCTGTTGGTTATTTTTGCATTA GGGTTTTTTGTCTGCGCAACAAGCATCGTCCGTCTATCAACCATCGTCCATCTCCTCCGAGACCCAGACTTCACC TCAGGAAACGGCCTCGCCGCAACCTGGTCCTTCGTCGAATCCAACGTCGCCATAATCTGCGCATGCCTACCCCCT CTGCGCCCGCTCCTCCAGCAGAAGCAGCCGCAGGCCAACCACCACCAACGATAA |
| Transcript | >Ani_SJS100_1|g3703.t1 ATGTATGCCCTGCCCGTGGGAATCGTTTTCCTTTGCCTGGCGACGGTCACGGTCGCGTTGCGACTGTATACGCGA TTGAAACTGGTGAGGAAACCGGGATGGGATGATTTGTTGATTGTGTTGTCGTTGGCGACTGATGTGGTGTTCTTC GCTTTCCTTGTCATAGAAATCCAAAACGGCCTCGCCGAAAACGAAGCAGATCTTGCTCCGGAGGTGGTGAGGAGG CAATTAAAGGCCCTCTGGATAACAATCCCCCTCTACAACCTGACCCTCACCCTCACCAAGTTATCCCTAATCTTC CTCTACCGCCGCCTCTTCCCAACCCACACCTACCGCATCCTCCTCATCCTCACCCTCATCTTCGTCATCATAACC GGCCTCTGGATGGTCCTCAGCACCTTGATCTTCTGCATCCCCATAAACGCCTTCTGGGATACGTCTATCCCGCAT ACATGTCTCCCCGAGGATGTAGTATGGTGTCTGAACGCCGCGTTCCAGATCACCACTGATCTGATACTCGTTGTG CTTCCCTTGCCCATCCTGGCGAATTTAAATCTGCCGAAAAGGCAGAAGGCCGCGCTGTTGGTTATTTTTGCATTA GGGTTTTTTGTCTGCGCAACAAGCATCGTCCGTCTATCAACCATCGTCCATCTCCTCCGAGACCCAGACTTCACC TCAGGAAACGGCCTCGCCGCAACCTGGTCCTTCGTCGAATCCAACGTCGCCATAATCTGCGCATGCCTACCCCCT CTGCGCCCGCTCCTCCAGCAGAAGCAGCCGCAGGCCAACCACCACCAACGATAA |
| Gene | >Ani_SJS100_1|g3703.t1 ATGTATGCCCTGCCCGTGGGAATCGTTTTCCTTTGCCTGGCGACGGTCACGGTCGCGTTGCGACTGTATACGCGA TTGAAACTGGTGAGGAAACCGGGATGGGATGATTTGTTGATTGTGTTGTCGTTGGTAGGCAGTATACTTTCTGAA TAGTTGATATGCAGTGCTGATATGATGTGATGTGTTGAGTATAGGCGACTGATGTGGTGTTCTTCGCTTTCCTTG TCATAGGTACGACGATGCGATGCTTGCATGCTATATCTTGAATGAACGATAAAAACTAACAATGTATACAATAGA AATCCAAAACGGCCTCGCCGAAAACGAAGCAGATCTTGCTCCGGAGGTGGTGAGGAGGCAATTAAAGGTATACTC CCCCTCTATACTACCCTATTTCCATACATGATATAGTTGCTAACCATGAAATGAATTAAATCAAGGCCCTCTGGA TAACAATCCCCCTCTACAACCTGACCCTCACCCTCACCAAGTTATCCCTAATCTTCCTCTACCGCCGCCTCTTCC CAACCCACACCTACCGCATCCTCCTCATCCTCACCCTCATCTTCGTCATCATAACCGGCCTCTGGATGGTCCTCA GCACCTTGATCTTCTGCATCCCCATAAACGCCTTCTGGGATACGTCTATCCCGCATACATGTCTCCCCGAGGATG TAGTATGGTGTCTGAACGCCGCGTTCCAGATCACCACTGATCTGATACTCGTTGTGCTTCCCTTGCCCATCCTGG CGAATTTAAATCTGCCGAAAAGGCAGAAGGCCGCGCTGTTGGTTATTTTTGCATTAGGGTTTTTGTATGTCTCCC TTACTCTCTTATCTTATACAACCCCAACCCACCCCCCCCTCCTCTTTCTTCCGTCGGTATAGGAAAGAACTAATG ATGGTAATGGTTACAGTGTCTGCGCAACAAGCATCGTCCGTCTATCAACCATCGTCCATCTCCTCCGAGACCCAG ACTTCACCTGTATACTCCCTCCCGTACCCTATCCTACCCTATACCTCCAATCCATACTAACAAAATTCAACAGCA GGAAACGGCCTCGCCGCAACCTGGTCCTTCGTCGAATCCAACGTCGCCATAATCTGCGCATGCCTACCCCCTCTG CGCCCGCTCCTCGTGCGCATCTTCCCCAAACTAATCCCATCACGAATGCGCTCCTACCAGAGAGACAAAGACTCC AGATCAAACAGCAATCCCAACAACAACAAAGCAGCAGAAGCAGCCGCAGGCCAACCACCACCAACGATAA |