Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g3697.t1
Gene name
Locationscaffold_017:207413..208401
Strand-
Gene length (bp)988
Transcript length (bp)744
Coding sequence length (bp)744
Protein length (aa) 248

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00018 SH3_1 SH3 domain 2.2E-13 126 171
PF14604 SH3_9 Variant SH3 domain 3.3E-09 126 175
PF07653 SH3_2 Variant SH3 domain 2.9E-06 130 177

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 24 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g3697.t1
MSMASQSDFFSAMTNRSLRNVRSELEFLADASVITPQQLSSILSQLPRDDERSRAPVPQQQPPVQQPPVVAQQPP
APYSPPTNQFANTTLNEKATYQQPPPQQYSTPPVPPPAYPQAPPVLSIASALYAYTPTDPGDLALQPHDRIQVLE
HMNADWWRGRNERTNLEGIFPRSYVNVLNEKAVSSPPPTNYGNMPLEVSQSGSTPPGEEGKKSKFEEQGKKFGKK
MGNAAIFGAGATMGSNIVNSIF*
Coding >Ani_SJS100_1|g3697.t1
ATGAGCATGGCGTCCCAGTCCGACTTCTTCTCGGCTATGACCAACCGGTCGCTCCGCAACGTCCGATCGGAACTT
GAGTTTCTCGCAGACGCATCAGTCATTACTCCGCAACAGCTCTCATCCATTCTATCGCAACTACCAAGGGACGAT
GAACGCAGCAGAGCCCCCGTGCCTCAGCAGCAGCCACCAGTGCAACAACCACCTGTCGTCGCCCAGCAGCCCCCT
GCCCCATACTCTCCTCCTACGAACCAGTTTGCAAACACCACCTTGAACGAGAAGGCCACTTATCAGCAGCCTCCT
CCGCAGCAGTACTCAACCCCGCCTGTTCCGCCACCTGCTTATCCCCAAGCTCCACCGGTACTGTCTATCGCTTCA
GCGCTCTATGCCTACACTCCGACGGACCCCGGAGACTTGGCTCTGCAACCACACGATCGTATTCAAGTCTTGGAA
CACATGAATGCCGACTGGTGGCGTGGTCGTAATGAGCGCACCAACCTCGAGGGTATCTTCCCTCGGAGCTATGTG
AACGTGCTGAACGAAAAGGCCGTTTCGTCTCCTCCCCCGACCAACTATGGAAACATGCCTCTGGAAGTCAGCCAG
AGTGGTTCGACGCCCCCTGGTGAAGAGGGCAAGAAGTCCAAGTTCGAGGAGCAGGGCAAGAAGTTTGGCAAGAAG
ATGGGCAATGCCGCTATCTTCGGTGCCGGTGCTACGATGGGTTCGAACATTGTCAACAGCATCTTCTAG
Transcript >Ani_SJS100_1|g3697.t1
ATGAGCATGGCGTCCCAGTCCGACTTCTTCTCGGCTATGACCAACCGGTCGCTCCGCAACGTCCGATCGGAACTT
GAGTTTCTCGCAGACGCATCAGTCATTACTCCGCAACAGCTCTCATCCATTCTATCGCAACTACCAAGGGACGAT
GAACGCAGCAGAGCCCCCGTGCCTCAGCAGCAGCCACCAGTGCAACAACCACCTGTCGTCGCCCAGCAGCCCCCT
GCCCCATACTCTCCTCCTACGAACCAGTTTGCAAACACCACCTTGAACGAGAAGGCCACTTATCAGCAGCCTCCT
CCGCAGCAGTACTCAACCCCGCCTGTTCCGCCACCTGCTTATCCCCAAGCTCCACCGGTACTGTCTATCGCTTCA
GCGCTCTATGCCTACACTCCGACGGACCCCGGAGACTTGGCTCTGCAACCACACGATCGTATTCAAGTCTTGGAA
CACATGAATGCCGACTGGTGGCGTGGTCGTAATGAGCGCACCAACCTCGAGGGTATCTTCCCTCGGAGCTATGTG
AACGTGCTGAACGAAAAGGCCGTTTCGTCTCCTCCCCCGACCAACTATGGAAACATGCCTCTGGAAGTCAGCCAG
AGTGGTTCGACGCCCCCTGGTGAAGAGGGCAAGAAGTCCAAGTTCGAGGAGCAGGGCAAGAAGTTTGGCAAGAAG
ATGGGCAATGCCGCTATCTTCGGTGCCGGTGCTACGATGGGTTCGAACATTGTCAACAGCATCTTCTAG
Gene >Ani_SJS100_1|g3697.t1
ATGAGCATGGCGTCCCAGTCCGACTTCTTCTCGGCTATGACCAACCGGTCGCTCCGCAACGTCCGATCGGTAGGA
TGCCCTCCCCTGTCAGCATCGCTCAGTAAACGGAGTTGCTCGAGCTGATCTTCAATTATGCACCTTGCTGACATC
CTTCGGTCCACTAGGAACTTGAGTTTCTCGCAGACGCATCAGTCATTACTCCGCAACAGCTCTCATCCATTCTAT
CGCAACTACCAAGGGACGATGAACGCAGCAGAGCCCCCGTGCCTCAGCAGCAGCCACCAGTGCAACAACCACCTG
TCGTCGCCCAGCAGCCCCCTGCCCCATACTCTCCTCCTACGAACCAGTTTGCAAACACCACCTTGAACGAGAAGG
CCACTTATCAGCAGCCTCCTCCGCAGCAGTACTCAACCCCGCCTGTTCCGCCACCTGCTTATCCCCAAGCTCCAC
CGGTACTGTCTATCGCTTCAGCGCTCTATGCCTACACTCCGACGGACCCCGGAGACTTGGCTCTGCAACCACACG
ATCGTATTCAAGTCTTGGAACACATGAATGCCGACTGTAAGGCTGTCAATACCCCTTGTGTGCAGCCTCCCTTGC
TAACCGCTGTTTATAGGGTGGCGTGGTCGTAATGAGCGCACCAACCTCGAGGGTATCTTCCCTCGGAGCTATGTG
AACGTGCTGAACGAAAAGGCCGTTTCGTCTCCTCCCCCGACCAACTATGGAAACATGCCTCTGGAAGTCAGCCAG
AGTGGTTCGACGCCCCCTGGTGAAGAGGGCAAGAAGTCCAAGTTCGAGGAGCAGGGCAAGAAGTTTGGCAAGAAG
ATGGGCAATGCCGGTACGTTTAAAGCGATGCGCATTCGATCGCCATATAGATTGATGCGCCGAACGTCATTAAAT
ATACGGTCAATTTTACTGATAATCACGTCTAGCTATCTTCGGTGCCGGTGCTACGATGGGTTCGAACATTGTCAA
CAGCATCTTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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