Protein ID | Ani_SJS100_1|g3683.t1 |
Gene name | |
Location | scaffold_017:166815..169003 |
Strand | + |
Gene length (bp) | 2188 |
Transcript length (bp) | 1713 |
Coding sequence length (bp) | 1713 |
Protein length (aa) | 571 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13347 | MFS_2 | MFS/sugar transport protein | 3.2E-09 | 30 | 246 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 38 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 20 | 42 | 22 |
2 | 57 | 79 | 22 |
3 | 92 | 114 | 22 |
4 | 124 | 146 | 22 |
5 | 175 | 197 | 22 |
6 | 207 | 224 | 17 |
7 | 262 | 284 | 22 |
8 | 311 | 333 | 22 |
9 | 369 | 386 | 17 |
10 | 391 | 413 | 22 |
11 | 493 | 515 | 22 |
12 | 541 | 560 | 19 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g3683.t1 MPQAARWVGTPSIKGRREWVRMVLLTFSLLGLQFTWGIEMTYCTPYLLQLGLTKSKTSLVWIAGPLSGLIIQPLI GVIADRSRSKWGRRRPFMIVGSFVVATCLLVLGWTTEIVNMFVKDAEKARNVTIALAVLSIYAVDFAINVVQACC RSLIVDTLPIPLQQTGSAWATRMTAIGQLIGYVIGSIDTVSIFGAIIGDTQFKQMTVIAAMSLVGAVFVTSYAVK ERVLVTARDSDDKAGTLQVISQLVKTTMDLPPRIQAICWAQFWAWIGWFPFLFYSTTWVGETYFRYEVPKDATQP ADMLGEVGRVGSLSLVVFSSMTFIGSVLLPFCVQPPDSKRPRFTPRPPPGLASLLKKVMGIRPDLQTTWLISHVM FAATMIFAPFARSRAVATFLVALCGIPWAVTCWAPFTFMGIEINKLAMNPSQSSRSSGVTMITSSSLLSGGPSTY SDRTNDTEMDVLRLNHHDPDSDSDIEDGVSNIPSTGELAGIYLGVLNVYTTLPQFLGTFISWIVFSVLEPGSTKR DDSAQDSQWMNLDKSTPNAISICLFIGALSAIVAVEATRRMRYTL* |
Coding | >Ani_SJS100_1|g3683.t1 ATGCCACAAGCTGCAAGATGGGTGGGCACACCCTCTATCAAGGGACGAAGGGAGTGGGTGCGCATGGTGCTGTTG ACCTTTAGTTTGTTGGGGTTACAATTCACCTGGGGCATTGAAATGACCTATTGCACCCCATACCTGCTCCAACTG GGCCTCACCAAATCCAAGACCTCGCTTGTCTGGATCGCCGGCCCTCTTTCTGGCTTGATTATCCAGCCCCTCATT GGTGTCATTGCTGACCGATCTCGATCCAAATGGGGCCGACGCAGGCCCTTCATGATCGTCGGCTCGTTCGTCGTC GCAACGTGCCTGCTTGTTCTTGGTTGGACTACTGAGATCGTTAATATGTTCGTAAAGGATGCGGAAAAGGCCAGA AACGTCACCATCGCGCTTGCAGTTCTAAGTATCTACGCTGTGGACTTCGCTATCAACGTTGTCCAAGCGTGTTGT CGCAGCTTGATTGTCGACACATTGCCTATTCCATTGCAGCAAACCGGATCAGCATGGGCGACTCGGATGACTGCC ATTGGCCAGCTCATTGGATATGTCATCGGATCCATTGATACAGTCAGCATATTTGGCGCCATAATCGGCGACACA CAATTCAAACAGATGACGGTCATTGCAGCAATGTCATTGGTTGGCGCTGTCTTCGTTACCTCTTACGCAGTCAAG GAGCGGGTTCTGGTCACCGCGAGAGACTCTGATGACAAGGCTGGGACGCTACAGGTGATTTCTCAACTCGTCAAG ACCACCATGGATCTACCACCGCGCATTCAGGCCATCTGCTGGGCGCAATTCTGGGCGTGGATTGGCTGGTTCCCC TTCCTCTTTTACAGCACCACCTGGGTCGGCGAAACATACTTTCGATACGAGGTCCCTAAGGACGCAACACAGCCA GCCGATATGCTTGGAGAAGTCGGTCGGGTGGGCAGTTTATCGCTTGTCGTCTTTTCCTCCATGACCTTCATCGGC TCCGTTCTCCTACCGTTCTGCGTCCAACCGCCAGACAGCAAACGACCCAGATTCACGCCACGCCCACCCCCCGGC CTCGCCTCACTGCTCAAGAAAGTAATGGGCATCCGTCCCGATCTCCAAACAACCTGGCTGATCTCCCACGTCATG TTCGCCGCGACCATGATCTTCGCACCTTTCGCCCGCTCCCGCGCTGTCGCAACCTTCCTCGTCGCCCTCTGTGGC ATCCCCTGGGCCGTCACCTGCTGGGCCCCTTTCACCTTCATGGGCATAGAAATCAACAAACTCGCCATGAACCCC TCCCAATCATCCCGCTCCTCCGGCGTAACAATGATCACCTCCTCCAGCCTCCTCTCCGGCGGCCCTTCCACCTAC AGTGACCGAACCAACGACACAGAAATGGACGTTCTCCGCCTCAACCACCACGACCCAGACAGCGACAGCGACATC GAAGACGGCGTCTCCAACATCCCATCCACCGGCGAACTCGCCGGCATCTACCTAGGCGTACTGAACGTCTACACT ACCCTCCCGCAGTTCCTCGGTACCTTCATCAGCTGGATCGTCTTCAGTGTCCTCGAGCCCGGCAGCACGAAACGC GACGACTCGGCTCAGGACTCTCAATGGATGAATCTGGATAAGAGCACCCCGAACGCTATTTCCATCTGTTTATTC ATCGGTGCATTGAGTGCCATTGTCGCTGTTGAAGCAACGCGACGTATGCGATATACTTTATAA |
Transcript | >Ani_SJS100_1|g3683.t1 ATGCCACAAGCTGCAAGATGGGTGGGCACACCCTCTATCAAGGGACGAAGGGAGTGGGTGCGCATGGTGCTGTTG ACCTTTAGTTTGTTGGGGTTACAATTCACCTGGGGCATTGAAATGACCTATTGCACCCCATACCTGCTCCAACTG GGCCTCACCAAATCCAAGACCTCGCTTGTCTGGATCGCCGGCCCTCTTTCTGGCTTGATTATCCAGCCCCTCATT GGTGTCATTGCTGACCGATCTCGATCCAAATGGGGCCGACGCAGGCCCTTCATGATCGTCGGCTCGTTCGTCGTC GCAACGTGCCTGCTTGTTCTTGGTTGGACTACTGAGATCGTTAATATGTTCGTAAAGGATGCGGAAAAGGCCAGA AACGTCACCATCGCGCTTGCAGTTCTAAGTATCTACGCTGTGGACTTCGCTATCAACGTTGTCCAAGCGTGTTGT CGCAGCTTGATTGTCGACACATTGCCTATTCCATTGCAGCAAACCGGATCAGCATGGGCGACTCGGATGACTGCC ATTGGCCAGCTCATTGGATATGTCATCGGATCCATTGATACAGTCAGCATATTTGGCGCCATAATCGGCGACACA CAATTCAAACAGATGACGGTCATTGCAGCAATGTCATTGGTTGGCGCTGTCTTCGTTACCTCTTACGCAGTCAAG GAGCGGGTTCTGGTCACCGCGAGAGACTCTGATGACAAGGCTGGGACGCTACAGGTGATTTCTCAACTCGTCAAG ACCACCATGGATCTACCACCGCGCATTCAGGCCATCTGCTGGGCGCAATTCTGGGCGTGGATTGGCTGGTTCCCC TTCCTCTTTTACAGCACCACCTGGGTCGGCGAAACATACTTTCGATACGAGGTCCCTAAGGACGCAACACAGCCA GCCGATATGCTTGGAGAAGTCGGTCGGGTGGGCAGTTTATCGCTTGTCGTCTTTTCCTCCATGACCTTCATCGGC TCCGTTCTCCTACCGTTCTGCGTCCAACCGCCAGACAGCAAACGACCCAGATTCACGCCACGCCCACCCCCCGGC CTCGCCTCACTGCTCAAGAAAGTAATGGGCATCCGTCCCGATCTCCAAACAACCTGGCTGATCTCCCACGTCATG TTCGCCGCGACCATGATCTTCGCACCTTTCGCCCGCTCCCGCGCTGTCGCAACCTTCCTCGTCGCCCTCTGTGGC ATCCCCTGGGCCGTCACCTGCTGGGCCCCTTTCACCTTCATGGGCATAGAAATCAACAAACTCGCCATGAACCCC TCCCAATCATCCCGCTCCTCCGGCGTAACAATGATCACCTCCTCCAGCCTCCTCTCCGGCGGCCCTTCCACCTAC AGTGACCGAACCAACGACACAGAAATGGACGTTCTCCGCCTCAACCACCACGACCCAGACAGCGACAGCGACATC GAAGACGGCGTCTCCAACATCCCATCCACCGGCGAACTCGCCGGCATCTACCTAGGCGTACTGAACGTCTACACT ACCCTCCCGCAGTTCCTCGGTACCTTCATCAGCTGGATCGTCTTCAGTGTCCTCGAGCCCGGCAGCACGAAACGC GACGACTCGGCTCAGGACTCTCAATGGATGAATCTGGATAAGAGCACCCCGAACGCTATTTCCATCTGTTTATTC ATCGGTGCATTGAGTGCCATTGTCGCTGTTGAAGCAACGCGACGTATGCGATATACTTTATAA |
Gene | >Ani_SJS100_1|g3683.t1 ATGCCACAAGCTGCAAGATGGGTGGGCACACCCTCTATCAAGGGACGAAGGGAGTGGGTGCGCATGGTGCTGTTG ACCTTTAGTTTGTTGGGGTTACAGTACGTATTTTCCCCTCATTTTCATTTCTTTGACAATGTTTTCAGCTGCTCT CAGTCGAAAGACGGCAATCGTTACGTACGCGCATAATTAGGCTGACTTGCTTCTTGTCGACAGATTCACCTGGGG CATTGAAATGACCTGTATGCGCGTTGCTGGCTCTTGTCCACTTGCTCAATGTTTCTGACTTGCAATGTAGATTGC ACCCCATACCTGCTCCAACTGGGCCTCACCAAATCCAAGACCTCGCTTGTCTGGATCGCCGGCCCTCTTTCTGGC TTGATTATCCAGCCCCTCATTGGTGTCATTGCTGACCGATCTCGATCCAAATGGGGCCGACGCAGGCCCTTCATG ATCGTCGGCTCGTTCGTCGTCGCAACGTGCCTGCTTGTTCTTGGTTGGACTACTGAGATCGTTAATATGTTCGTA AAGGATGCGGAAAAGGTACTTGGTAGCATGCGAATTGCCTTTACGTCTTTTCATACCCAGGAGCTTACTGAGATC GTCTTTTGCTTCAGGCCAGAAACGTCACCATCGCGCTTGCAGTTCTAAGTATCTACGCTGTGGACTTCGCTATCA ACGTTGGTCAGTCTGCACCGCTATGATCTTTCTTTATTCCCAATCTAACTCAAAAGCAGTCCAAGCGTGTTGTCG CAGCTTGATTGTCGACACATTGCCTATTCCATTGCAGCAAACCGGATCAGCATGGGGTATGCCACTTCTGCCCCT AACCACAAAGTATAGCAGCTAAGAGTATATAGCGACTCGGATGACTGCCATTGGCCAGCTCATTGGATATGTCAT CGGATCCATTGATACAGTCAGCATATTTGGCGCCATAATCGGCGACACACAATTCAAACAGATGACGGTCATTGC AGCAATGTCATTGGTTGGCGCTGTCTTCGTTACCTCTTACGCAGTCAAGGAGCGGGTTCTGGTCACCGCGAGGTA AGGAATTATCCAAATCGGAATCTTTACACCATGCCATATACTGACACATACCAACAGAGACTCTGATGACAAGGC TGGGACGCTACAGGTGATTTCTCAACTCGTCAAGACCACCATGGATCTACCACCGCGCATTCAGGCCATCTGCTG GGCGCAATTCTGGGCGTGGATTGGTACGGTGCCATATTCTCTCCGACGCCAGATTCCAAGTAGGGATGTACTAAT CGAATAACCCACAGGCTGGTTCCCCTTCCTCTTTTACAGCACCACCTGGGTCGGCGAAACATACTTTCGATACGA GGTCCCTAAGGACGCAACACAGCCAGCCGATATGCTTGGAGAAGTCGGTCGGGTGGGCAGTTTATCGCTTGTCGT CTTTTCCTCCATGACCTTCATCGGCTCCGTTCTCCTACCGTTCTGCGTCCAACCGCCAGACAGCAAACGACCCAG ATTCACGCCACGCCCACCCCCCGGCCTCGCCTCACTGCTCAAGAAAGTAATGGGCATCCGTCCCGATCTCCAAAC AACCTGGCTGATCTCCCACGTCATGTTCGCCGCGACCATGATCTTCGCACCTTTCGCCCGCTCCCGCGCTGTCGC AACCTTCCTCGTCGCCCTCTGTGGCATCCCCTGGGCCGTCACCTGCTGGGCCCCTTTCACCTTCATGGGCATAGA AATCAACAAACTCGCCATGAACCCCTCCCAATCATCCCGCTCCTCCGGCGTAACAATGATCACCTCCTCCAGCCT CCTCTCCGGCGGCCCTTCCACCTACAGTGACCGAACCAACGACACAGAAATGGACGTTCTCCGCCTCAACCACCA CGACCCAGACAGCGACAGCGACATCGAAGACGGCGTCTCCAACATCCCATCCACCGGCGAACTCGCCGGCATCTA CCTAGGCGTACTGAACGTCTACACTACCCTCCCGCAGTTCCTCGGTACCTTCATCAGCTGGATCGTCTTCAGTGT CCTCGAGCCCGGCAGCACGAAACGCGACGACTCGGCTCAGGACTCTCAATGGATGAATCTGGATAAGAGCACCCC GAACGCTATTTCCATCTGTTTATTCATCGGTGCATTGAGTGCCATTGTCGCTGTTGAAGCAACGCGACGTATGCG ATATACTTTATAA |