Protein ID | Ani_SJS100_1|g3650.t1 |
Gene name | |
Location | scaffold_017:71585..73282 |
Strand | + |
Gene length (bp) | 1697 |
Transcript length (bp) | 1530 |
Coding sequence length (bp) | 1530 |
Protein length (aa) | 510 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13621 | Cupin_8 | Cupin-like domain | 1.2E-13 | 192 | 411 |
PF02373 | JmjC | JmjC domain, hydroxylase | 3.2E-09 | 298 | 411 |
PF12937 | F-box-like | F-box-like | 4.3E-06 | 70 | 113 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0005488 | binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g3650.t1 MKMPDINSLDSARPLGGAVAAHSYSSHPESNLEDLSGHEEIPGHPLGVKPSGNALLAAENLRHAIGTFNILPDES ILMLLEYLDGPSLLNIGQSCKAFYAFTRAEDLWKALFIGSPPASFSWKGTWRSTYLNIPPSEECILDCSNLFSDV LHRPFHCAHISLDPYIKNIPARNQIARLPDLSFEEFNEKWSDTPFILTEPVKQWPAYKNWSVNMLLDHYGEVVFR AEAVDWPFHTYVDYMHNNSDESPLYLFDRAFVSKMGLKVGQPDQEPEATYWPPGCFGEDFFSVLGNDRPDRQWLI IGPERSGSTFHKDPNATSAWNAVVRGSKYWIMFPSSSKLPPPPGVYVSDDQSEVTSPLSIAEWLFGFHAEARRTP GCIEGICHEGEILHVPSGWWHLVVNIEPAIAITQNFIPRAHLSAALDFLSNKADQISGFRKDVNNPYERFVAQMQ KSHPELLEQAQAELQKKNEGKKRKWDEIVHGNPEQDGGEAAEGGGFSFGFGDDSDVEVP* |
Coding | >Ani_SJS100_1|g3650.t1 ATGAAAATGCCGGATATCAATTCGTTGGACAGTGCTCGTCCTCTCGGCGGTGCGGTGGCTGCTCATAGCTACTCG TCGCATCCGGAATCTAATCTTGAGGACCTGTCTGGCCATGAAGAAATTCCTGGCCATCCTCTGGGCGTGAAACCC AGTGGCAATGCCTTGCTCGCCGCAGAGAACCTGCGCCATGCAATTGGGACCTTTAATATCCTACCGGATGAGTCG ATATTGATGTTGCTGGAATACCTCGACGGGCCCAGTTTGTTGAATATTGGACAGTCATGCAAGGCATTTTATGCT TTTACCAGAGCCGAGGATCTCTGGAAAGCTCTTTTTATCGGGTCTCCTCCCGCTTCGTTCTCATGGAAAGGAACA TGGCGTTCAACTTATCTTAACATTCCTCCATCGGAAGAGTGCATCCTGGACTGCTCGAATCTATTCTCGGATGTC CTGCACCGACCCTTTCACTGCGCCCACATATCTCTAGATCCCTACATCAAGAATATCCCTGCCCGCAACCAAATT GCTCGTCTCCCCGATCTCTCTTTCGAGGAGTTCAATGAAAAATGGAGCGATACGCCCTTCATCTTGACTGAGCCG GTGAAACAATGGCCAGCGTACAAGAATTGGTCCGTAAACATGCTACTAGATCACTACGGCGAGGTTGTCTTCCGT GCAGAGGCAGTGGATTGGCCTTTCCATACTTATGTCGATTACATGCACAACAACTCCGATGAGAGTCCTCTTTAC CTGTTCGACCGGGCCTTTGTCTCGAAGATGGGCCTTAAGGTCGGTCAACCGGACCAGGAGCCTGAAGCCACTTAC TGGCCTCCCGGTTGCTTTGGAGAAGACTTCTTCTCCGTGCTGGGCAACGATCGCCCTGACAGGCAGTGGCTGATC ATTGGACCCGAGCGGTCTGGAAGTACATTTCACAAGGACCCGAACGCTACCAGTGCCTGGAACGCGGTTGTCCGT GGCTCGAAGTACTGGATCATGTTCCCGTCGTCTTCGAAGCTCCCGCCGCCTCCGGGTGTCTATGTGTCAGACGAT CAGAGTGAAGTGACTTCCCCTCTTAGCATTGCTGAGTGGCTTTTTGGCTTCCACGCAGAGGCACGACGCACTCCA GGCTGTATTGAGGGGATCTGTCACGAGGGGGAGATTCTCCACGTTCCTTCGGGATGGTGGCACTTGGTCGTCAAC ATCGAGCCGGCTATTGCCATTACTCAGAACTTCATACCCCGTGCCCATCTGAGCGCTGCGCTGGACTTCTTGTCT AACAAGGCCGACCAGATTTCAGGTTTCAGGAAGGACGTAAACAATCCTTACGAACGGTTTGTGGCGCAGATGCAG AAATCGCACCCTGAACTCTTGGAACAGGCGCAGGCAGAGCTGCAGAAGAAGAACGAGGGGAAGAAACGGAAATGG GACGAAATTGTGCACGGAAACCCTGAGCAAGACGGAGGGGAGGCCGCCGAAGGAGGCGGTTTCAGCTTTGGGTTT GGAGATGACAGCGATGTTGAAGTCCCCTAA |
Transcript | >Ani_SJS100_1|g3650.t1 ATGAAAATGCCGGATATCAATTCGTTGGACAGTGCTCGTCCTCTCGGCGGTGCGGTGGCTGCTCATAGCTACTCG TCGCATCCGGAATCTAATCTTGAGGACCTGTCTGGCCATGAAGAAATTCCTGGCCATCCTCTGGGCGTGAAACCC AGTGGCAATGCCTTGCTCGCCGCAGAGAACCTGCGCCATGCAATTGGGACCTTTAATATCCTACCGGATGAGTCG ATATTGATGTTGCTGGAATACCTCGACGGGCCCAGTTTGTTGAATATTGGACAGTCATGCAAGGCATTTTATGCT TTTACCAGAGCCGAGGATCTCTGGAAAGCTCTTTTTATCGGGTCTCCTCCCGCTTCGTTCTCATGGAAAGGAACA TGGCGTTCAACTTATCTTAACATTCCTCCATCGGAAGAGTGCATCCTGGACTGCTCGAATCTATTCTCGGATGTC CTGCACCGACCCTTTCACTGCGCCCACATATCTCTAGATCCCTACATCAAGAATATCCCTGCCCGCAACCAAATT GCTCGTCTCCCCGATCTCTCTTTCGAGGAGTTCAATGAAAAATGGAGCGATACGCCCTTCATCTTGACTGAGCCG GTGAAACAATGGCCAGCGTACAAGAATTGGTCCGTAAACATGCTACTAGATCACTACGGCGAGGTTGTCTTCCGT GCAGAGGCAGTGGATTGGCCTTTCCATACTTATGTCGATTACATGCACAACAACTCCGATGAGAGTCCTCTTTAC CTGTTCGACCGGGCCTTTGTCTCGAAGATGGGCCTTAAGGTCGGTCAACCGGACCAGGAGCCTGAAGCCACTTAC TGGCCTCCCGGTTGCTTTGGAGAAGACTTCTTCTCCGTGCTGGGCAACGATCGCCCTGACAGGCAGTGGCTGATC ATTGGACCCGAGCGGTCTGGAAGTACATTTCACAAGGACCCGAACGCTACCAGTGCCTGGAACGCGGTTGTCCGT GGCTCGAAGTACTGGATCATGTTCCCGTCGTCTTCGAAGCTCCCGCCGCCTCCGGGTGTCTATGTGTCAGACGAT CAGAGTGAAGTGACTTCCCCTCTTAGCATTGCTGAGTGGCTTTTTGGCTTCCACGCAGAGGCACGACGCACTCCA GGCTGTATTGAGGGGATCTGTCACGAGGGGGAGATTCTCCACGTTCCTTCGGGATGGTGGCACTTGGTCGTCAAC ATCGAGCCGGCTATTGCCATTACTCAGAACTTCATACCCCGTGCCCATCTGAGCGCTGCGCTGGACTTCTTGTCT AACAAGGCCGACCAGATTTCAGGTTTCAGGAAGGACGTAAACAATCCTTACGAACGGTTTGTGGCGCAGATGCAG AAATCGCACCCTGAACTCTTGGAACAGGCGCAGGCAGAGCTGCAGAAGAAGAACGAGGGGAAGAAACGGAAATGG GACGAAATTGTGCACGGAAACCCTGAGCAAGACGGAGGGGAGGCCGCCGAAGGAGGCGGTTTCAGCTTTGGGTTT GGAGATGACAGCGATGTTGAAGTCCCCTAA |
Gene | >Ani_SJS100_1|g3650.t1 ATGAAAATGCCGGATATCAATTCGTTGGACAGTGCTCGTCCTCTCGGCGGTGCGGTGGCTGCTCATAGCTACTCG TCGCATCCGGAATCTAATCTTGAGGACCTGTCTGGCCATGAAGAAATTCCTGGCCATCCTCTGGGCGTGAAACCC AGTGGCAATGCCTTGCTCGCCGCAGAGAACCTGCGCCATGCAATTGGGACCTTTAATATCCTACCGGATGAGTCG ATATTGATGTTGCTGGAATACCTCGACGGGCCCAGTTTGTTGAATATTGGACAGTCATGCAAGGCATTTTATGCT TTTACCAGAGCCGAGGATCTCTGGAAAGCTCTTTTTATCGGGTGAGATATAGATCTATTGTTCTTACATTATTGT TATTGTCTGCATCTGCTTGCGAGAGTACTGCTCTTCTATTTCTGTTGCATTGTGGGACATGGCAATTTGCTCTCA TCACATTTATAGATTTACAACTAGACGGCCTGGGGCATTGTACTAACGTTTCAGTTAGGTCTCCTCCCGCTTCGT TCTCATGGAAAGGAACATGGCGTTCAACTTATCTTAACATTCCTCCATCGGAAGAGTGCATCCTGGACTGCTCGA ATCTATTCTCGGATGTCCTGCACCGACCCTTTCACTGCGCCCACATATCTCTAGATCCCTACATCAAGAATATCC CTGCCCGCAACCAAATTGCTCGTCTCCCCGATCTCTCTTTCGAGGAGTTCAATGAAAAATGGAGCGATACGCCCT TCATCTTGACTGAGCCGGTGAAACAATGGCCAGCGTACAAGAATTGGTCCGTAAACATGCTACTAGATCACTACG GCGAGGTTGTCTTCCGTGCAGAGGCAGTGGATTGGCCTTTCCATACTTATGTCGATTACATGCACAACAACTCCG ATGAGAGTCCTCTTTACCTGTTCGACCGGGCCTTTGTCTCGAAGATGGGCCTTAAGGTCGGTCAACCGGACCAGG AGCCTGAAGCCACTTACTGGCCTCCCGGTTGCTTTGGAGAAGACTTCTTCTCCGTGCTGGGCAACGATCGCCCTG ACAGGCAGTGGCTGATCATTGGACCCGAGCGGTCTGGAAGTACATTTCACAAGGACCCGAACGCTACCAGTGCCT GGAACGCGGTTGTCCGTGGCTCGAAGTACTGGATCATGTTCCCGTCGTCTTCGAAGCTCCCGCCGCCTCCGGGTG TCTATGTGTCAGACGATCAGAGTGAAGTGACTTCCCCTCTTAGCATTGCTGAGTGGCTTTTTGGCTTCCACGCAG AGGCACGACGCACTCCAGGCTGTATTGAGGGGATCTGTCACGAGGGGGAGATTCTCCACGTTCCTTCGGGATGGT GGCACTTGGTCGTCAACATCGAGCCGGCTATTGCCATTACTCAGAACTTCATACCCCGTGCCCATCTGAGCGCTG CGCTGGACTTCTTGTCTAACAAGGCCGACCAGATTTCAGGTTTCAGGAAGGACGTAAACAATCCTTACGAACGGT TTGTGGCGCAGATGCAGAAATCGCACCCTGAACTCTTGGAACAGGCGCAGGCAGAGCTGCAGAAGAAGAACGAGG GGAAGAAACGGAAATGGGACGAAATTGTGCACGGAAACCCTGAGCAAGACGGAGGGGAGGCCGCCGAAGGAGGCG GTTTCAGCTTTGGGTTTGGAGATGACAGCGATGTTGAAGTCCCCTAA |