Protein ID | Ani_SJS100_1|g3618.t1 |
Gene name | |
Location | scaffold_016:480087..481579 |
Strand | + |
Gene length (bp) | 1492 |
Transcript length (bp) | 1386 |
Coding sequence length (bp) | 1386 |
Protein length (aa) | 462 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF05637 | Glyco_transf_34 | galactosyl transferase GMA12/MNN10 family | 2.7E-68 | 161 | 420 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016021 | integral component of membrane | Yes |
GO:0016757 | glycosyltransferase activity | Yes |
GO:0016740 | transferase activity | No |
GO:0003824 | catalytic activity | No |
GO:0110165 | cellular anatomical entity | No |
GO:0031224 | intrinsic component of membrane | No |
GO:0005575 | cellular_component | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 129 | 148 | 19 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g3618.t1 MSLSRSPSPHPAGAGWSSPGLTSPSGSTTPHNGFLSPNPIGASGISWAAAKAKSDEVRGYPSFSTKNSGFFSRSR RQLSATLPRFRLGSGSPNGYVDKDEFGRGRPLSPATGWRLGFGRSVLRRRRSRLLVALIFLLLGYMFFGASLLQK YRRSPLGGGRKFVIILESNIEGGVMEWKGAREWAIERNSIWNKKNYVERWGYELETVNMLAKKRYSHEWRESWEK VDLIRETMRKHPDAEWFWWLDLSTWIMEYSYSLQDHIFDRLDEIIYRDINVYNPLNISHPPDDAYLDEVSRSPNG DGDPSSVHMLLSQDCGGFNLGSFFIRRSLWADRLLDAWWDPVMYEQKHMEWEHKEQDAMEYLYATQPWVRSHVGF LPQRYINSYPQGACGDENDPNVHYQEDERDFLVNMAGCQYGRDCWGEMYQYREISKQLNLTWWERMKDKLNGLYE KLFPGEEQQVE* |
Coding | >Ani_SJS100_1|g3618.t1 ATGTCCTTGTCGCGATCGCCCTCTCCCCACCCCGCGGGAGCAGGATGGTCTAGTCCTGGACTCACTTCGCCCAGT GGCTCTACCACGCCTCACAATGGCTTCCTGTCGCCAAATCCCATAGGCGCCAGCGGCATCTCCTGGGCCGCCGCC AAAGCGAAGAGCGACGAGGTACGAGGCTACCCGTCCTTTTCGACGAAGAACAGCGGATTCTTCTCGCGCTCAAGA CGCCAGCTCTCCGCCACTTTGCCGCGCTTTCGTCTGGGCTCGGGGTCTCCGAATGGTTATGTCGATAAGGATGAG TTTGGCCGGGGGCGGCCTCTCTCCCCAGCTACGGGCTGGCGCTTGGGGTTTGGCAGGTCGGTTCTGCGGCGCAGA CGATCGCGCTTGCTCGTGGCGCTGATCTTTCTTTTGCTGGGCTATATGTTTTTTGGGGCGTCTCTTCTCCAGAAG TATCGGCGCTCTCCGCTAGGCGGTGGGCGCAAATTCGTGATCATACTGGAATCCAACATAGAAGGCGGCGTGATG GAGTGGAAGGGAGCGCGCGAATGGGCGATCGAGCGCAACAGCATATGGAACAAGAAGAATTATGTGGAACGATGG GGCTACGAGTTGGAAACCGTCAACATGTTGGCGAAGAAGCGGTATTCACACGAATGGCGCGAGAGCTGGGAGAAG GTGGACCTTATCCGGGAGACGATGCGAAAGCATCCCGATGCTGAATGGTTTTGGTGGCTGGACCTTAGCACTTGG ATCATGGAATACTCCTACTCGTTACAGGACCATATATTCGACCGCTTGGATGAAATCATTTACCGGGACATCAAT GTCTATAACCCATTGAACATCAGCCACCCGCCGGACGACGCTTATCTGGACGAGGTGTCTCGTTCGCCAAACGGA GACGGGGACCCATCATCGGTACATATGCTATTGTCGCAGGACTGTGGGGGCTTCAACCTCGGCTCTTTCTTCATC CGGCGCTCCCTCTGGGCCGACCGCCTGCTGGACGCGTGGTGGGACCCAGTCATGTACGAACAGAAACATATGGAG TGGGAGCATAAAGAGCAGGATGCGATGGAATACCTCTATGCGACGCAGCCGTGGGTTCGCAGCCACGTTGGCTTC CTCCCTCAACGCTATATCAACTCGTATCCCCAGGGGGCATGTGGGGACGAGAATGACCCGAATGTCCACTACCAG GAAGATGAAAGAGACTTCCTGGTCAACATGGCTGGGTGTCAGTATGGACGCGACTGCTGGGGCGAGATGTACCAG TACCGTGAAATCAGCAAGCAGCTGAACCTGACATGGTGGGAGCGGATGAAGGACAAGTTGAACGGCCTTTACGAG AAGCTTTTCCCGGGCGAGGAACAGCAAGTTGAATGA |
Transcript | >Ani_SJS100_1|g3618.t1 ATGTCCTTGTCGCGATCGCCCTCTCCCCACCCCGCGGGAGCAGGATGGTCTAGTCCTGGACTCACTTCGCCCAGT GGCTCTACCACGCCTCACAATGGCTTCCTGTCGCCAAATCCCATAGGCGCCAGCGGCATCTCCTGGGCCGCCGCC AAAGCGAAGAGCGACGAGGTACGAGGCTACCCGTCCTTTTCGACGAAGAACAGCGGATTCTTCTCGCGCTCAAGA CGCCAGCTCTCCGCCACTTTGCCGCGCTTTCGTCTGGGCTCGGGGTCTCCGAATGGTTATGTCGATAAGGATGAG TTTGGCCGGGGGCGGCCTCTCTCCCCAGCTACGGGCTGGCGCTTGGGGTTTGGCAGGTCGGTTCTGCGGCGCAGA CGATCGCGCTTGCTCGTGGCGCTGATCTTTCTTTTGCTGGGCTATATGTTTTTTGGGGCGTCTCTTCTCCAGAAG TATCGGCGCTCTCCGCTAGGCGGTGGGCGCAAATTCGTGATCATACTGGAATCCAACATAGAAGGCGGCGTGATG GAGTGGAAGGGAGCGCGCGAATGGGCGATCGAGCGCAACAGCATATGGAACAAGAAGAATTATGTGGAACGATGG GGCTACGAGTTGGAAACCGTCAACATGTTGGCGAAGAAGCGGTATTCACACGAATGGCGCGAGAGCTGGGAGAAG GTGGACCTTATCCGGGAGACGATGCGAAAGCATCCCGATGCTGAATGGTTTTGGTGGCTGGACCTTAGCACTTGG ATCATGGAATACTCCTACTCGTTACAGGACCATATATTCGACCGCTTGGATGAAATCATTTACCGGGACATCAAT GTCTATAACCCATTGAACATCAGCCACCCGCCGGACGACGCTTATCTGGACGAGGTGTCTCGTTCGCCAAACGGA GACGGGGACCCATCATCGGTACATATGCTATTGTCGCAGGACTGTGGGGGCTTCAACCTCGGCTCTTTCTTCATC CGGCGCTCCCTCTGGGCCGACCGCCTGCTGGACGCGTGGTGGGACCCAGTCATGTACGAACAGAAACATATGGAG TGGGAGCATAAAGAGCAGGATGCGATGGAATACCTCTATGCGACGCAGCCGTGGGTTCGCAGCCACGTTGGCTTC CTCCCTCAACGCTATATCAACTCGTATCCCCAGGGGGCATGTGGGGACGAGAATGACCCGAATGTCCACTACCAG GAAGATGAAAGAGACTTCCTGGTCAACATGGCTGGGTGTCAGTATGGACGCGACTGCTGGGGCGAGATGTACCAG TACCGTGAAATCAGCAAGCAGCTGAACCTGACATGGTGGGAGCGGATGAAGGACAAGTTGAACGGCCTTTACGAG AAGCTTTTCCCGGGCGAGGAACAGCAAGTTGAATGA |
Gene | >Ani_SJS100_1|g3618.t1 ATGTCCTTGTCGCGATCGCCCTCTCCCCACCCCGCGGGAGCAGGATGGTCTAGTCCTGGACTCACTTCGCCCAGT GGCTCTACCACGCCTCACAATGGCTTCCTGTCGCCAAATCCCATAGGCGCCAGCGGCATCTCCTGGGCCGCCGCC AAAGCGAAGAGCGACGAGGTACGAGGCTACCCGTCCTTTTCGACGAAGAACAGCGGATTCTTCTCGCGCTCAAGA CGCCAGCTCTCCGCCACTTTGCCGCGCTTTCGTCTGGGCTCGGGGTCTCCGAATGGTTATGTCGATAAGGATGAG TTTGGCCGGGGGCGGCCTCTCTCCCCAGCTACGGGCTGGCGCTTGGGGTTTGGCAGGTCGGTTCTGCGGCGCAGA CGATCGCGCTTGCTCGTGGCGCTGATCTTTCTTTTGCTGGGCTATATGTTTTTTGGGGCGTGTAAGTGAATCGCA TACCAATGGGAAGAAAGCCTGCAGGTAGCTGACCTTGTTACAGCTCTTCTCCAGAAGTATCGGCGCTCTCCGCTA GGCGGTGGGCGCAAATTCGTGATCATACTGGAATCCAACATAGAAGGCGGCGTGATGGAGTGGAAGGGAGCGCGC GAATGGGCGATCGAGCGCAACAGCATATGGAACAAGAAGAATTATGTGGAACGATGGGGCTACGAGTTGGAAACC GTCAACATGTTGGCGAAGAAGCGGTATTCACACGAATGGCGCGAGAGCTGGGAGAAGGTGGACCTTATCCGGGAG ACGATGCGAAAGCATCCCGATGCTGAATGGTATGCTTGCCGTATTTGATTCCGTGAGCGTCACTGACATCTTGTG CAGGTTTTGGTGGCTGGACCTTAGCACTTGGATCATGGAATACTCCTACTCGTTACAGGACCATATATTCGACCG CTTGGATGAAATCATTTACCGGGACATCAATGTCTATAACCCATTGAACATCAGCCACCCGCCGGACGACGCTTA TCTGGACGAGGTGTCTCGTTCGCCAAACGGAGACGGGGACCCATCATCGGTACATATGCTATTGTCGCAGGACTG TGGGGGCTTCAACCTCGGCTCTTTCTTCATCCGGCGCTCCCTCTGGGCCGACCGCCTGCTGGACGCGTGGTGGGA CCCAGTCATGTACGAACAGAAACATATGGAGTGGGAGCATAAAGAGCAGGATGCGATGGAATACCTCTATGCGAC GCAGCCGTGGGTTCGCAGCCACGTTGGCTTCCTCCCTCAACGCTATATCAACTCGTATCCCCAGGGGGCATGTGG GGACGAGAATGACCCGAATGTCCACTACCAGGAAGATGAAAGAGACTTCCTGGTCAACATGGCTGGGTGTCAGTA TGGACGCGACTGCTGGGGCGAGATGTACCAGTACCGTGAAATCAGCAAGCAGCTGAACCTGACATGGTGGGAGCG GATGAAGGACAAGTTGAACGGCCTTTACGAGAAGCTTTTCCCGGGCGAGGAACAGCAAGTTGAATGA |