Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g3604.t1
Gene name
Locationscaffold_016:429554..430852
Strand+
Gene length (bp)1298
Transcript length (bp)1239
Coding sequence length (bp)1239
Protein length (aa) 413

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01073 3Beta_HSD 3-beta hydroxysteroid dehydrogenase/isomerase family 3.3E-40 81 321
PF01370 Epimerase NAD dependent epimerase/dehydratase family 8.4E-18 13 271
PF16363 GDP_Man_Dehyd GDP-mannose 4,6 dehydratase 3.4E-08 83 268
PF07993 NAD_binding_4 Male sterility protein 7.8E-09 16 226
PF04321 RmlD_sub_bind RmlD substrate binding domain 3.8E-08 13 239

GO

GO Term Description Terminal node
GO:0006694 steroid biosynthetic process Yes
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Yes
GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity Yes
GO:1901576 organic substance biosynthetic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0071704 organic substance metabolic process No
GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor No
GO:0044238 primary metabolic process No
GO:0008202 steroid metabolic process No
GO:0008610 lipid biosynthetic process No
GO:0003674 molecular_function No
GO:0008152 metabolic process No
GO:0006629 lipid metabolic process No
GO:0016491 oxidoreductase activity No
GO:0003824 catalytic activity No
GO:0009058 biosynthetic process No
GO:0016229 steroid dehydrogenase activity No
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors No
GO:0008150 biological_process No
GO:1901362 organic cyclic compound biosynthetic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g3604.t1
MSTRRPTMELGTVLVVGGCGFVGWHIVDQLLNFPSETDPSAALPKPQNDPRFIYPKLGDRYPRCIAKVAVVDLRT
THNRLPGAEYYDGDITSEESMLAVFRAVKPDVVIHTATPNVLEGNKPLLRKVNVDGTKVLVEVAGGARGDWGGKC
KAFVYTSSSSVVHDTQSDLINVTEEWPLIRGPLQQEYYSETKADAEELVLKYNRASPTSMVTCALRPAGIYGEKD
TTFTFKVLEHSAKASPTVLRMQLGENNNLFDFTYVGNIAYAHTLAAYRLLATYSRYESGQGAPLDHERVDGEAFN
VTNDSPVYFWDMTRAAWALTGKVVEPHQVWELPEGVLGPIGGIAETVLGLLGKTPRLTRRTVRYSCMTRYYSCDK
AKFRLGYRPVVPVYEGLARAVGYVVEQERVAGEKKAL*
Coding >Ani_SJS100_1|g3604.t1
ATGTCTACTCGACGTCCTACAATGGAACTGGGCACTGTCCTAGTGGTTGGTGGCTGCGGGTTCGTGGGTTGGCAC
ATTGTTGATCAATTGCTCAATTTCCCTTCGGAGACAGACCCCAGTGCTGCTCTTCCCAAGCCCCAGAATGACCCT
AGGTTCATTTATCCCAAGCTAGGTGATCGATACCCTCGGTGCATCGCGAAAGTAGCAGTTGTCGACCTGCGAACG
ACCCACAACCGTCTCCCGGGAGCCGAGTATTATGATGGCGACATCACGTCCGAAGAGTCCATGTTGGCCGTTTTC
CGCGCGGTCAAGCCCGACGTCGTTATCCACACCGCTACGCCCAACGTTTTGGAAGGGAACAAGCCCTTGTTGCGT
AAGGTCAATGTTGACGGAACTAAAGTCTTGGTGGAAGTTGCGGGCGGTGCCCGTGGTGACTGGGGTGGAAAGTGC
AAAGCTTTTGTATACACCAGCTCGAGCTCTGTCGTGCACGATACCCAAAGCGACCTCATTAACGTCACCGAAGAG
TGGCCTCTCATCCGGGGGCCATTGCAACAAGAGTACTATTCAGAAACCAAGGCGGACGCCGAAGAACTCGTCTTG
AAGTATAACCGCGCCTCTCCAACCTCGATGGTAACATGTGCCCTTCGCCCGGCTGGTATTTATGGTGAGAAGGAT
ACGACCTTCACCTTCAAGGTCCTGGAACACTCAGCCAAAGCCTCCCCGACCGTCCTCCGCATGCAATTAGGCGAG
AACAACAACTTGTTTGATTTCACGTACGTTGGAAACATTGCATACGCTCATACTTTGGCTGCATACCGCTTGCTT
GCTACCTACTCTCGGTATGAATCTGGACAGGGCGCTCCCCTGGACCACGAGCGGGTTGACGGCGAAGCGTTCAAT
GTCACGAACGATTCCCCAGTCTACTTCTGGGACATGACACGTGCTGCCTGGGCACTGACTGGCAAGGTCGTGGAG
CCTCACCAGGTGTGGGAGCTCCCCGAGGGCGTTCTGGGCCCTATTGGTGGAATTGCAGAGACGGTATTGGGACTC
CTCGGCAAGACACCTCGTTTAACTAGAAGAACGGTTCGCTACTCATGTATGACTCGTTACTACTCATGCGACAAG
GCCAAGTTCCGGCTCGGATATAGACCCGTTGTACCTGTGTACGAGGGTCTCGCTCGTGCAGTCGGGTATGTGGTG
GAACAGGAGCGGGTGGCCGGTGAAAAGAAGGCGTTGTGA
Transcript >Ani_SJS100_1|g3604.t1
ATGTCTACTCGACGTCCTACAATGGAACTGGGCACTGTCCTAGTGGTTGGTGGCTGCGGGTTCGTGGGTTGGCAC
ATTGTTGATCAATTGCTCAATTTCCCTTCGGAGACAGACCCCAGTGCTGCTCTTCCCAAGCCCCAGAATGACCCT
AGGTTCATTTATCCCAAGCTAGGTGATCGATACCCTCGGTGCATCGCGAAAGTAGCAGTTGTCGACCTGCGAACG
ACCCACAACCGTCTCCCGGGAGCCGAGTATTATGATGGCGACATCACGTCCGAAGAGTCCATGTTGGCCGTTTTC
CGCGCGGTCAAGCCCGACGTCGTTATCCACACCGCTACGCCCAACGTTTTGGAAGGGAACAAGCCCTTGTTGCGT
AAGGTCAATGTTGACGGAACTAAAGTCTTGGTGGAAGTTGCGGGCGGTGCCCGTGGTGACTGGGGTGGAAAGTGC
AAAGCTTTTGTATACACCAGCTCGAGCTCTGTCGTGCACGATACCCAAAGCGACCTCATTAACGTCACCGAAGAG
TGGCCTCTCATCCGGGGGCCATTGCAACAAGAGTACTATTCAGAAACCAAGGCGGACGCCGAAGAACTCGTCTTG
AAGTATAACCGCGCCTCTCCAACCTCGATGGTAACATGTGCCCTTCGCCCGGCTGGTATTTATGGTGAGAAGGAT
ACGACCTTCACCTTCAAGGTCCTGGAACACTCAGCCAAAGCCTCCCCGACCGTCCTCCGCATGCAATTAGGCGAG
AACAACAACTTGTTTGATTTCACGTACGTTGGAAACATTGCATACGCTCATACTTTGGCTGCATACCGCTTGCTT
GCTACCTACTCTCGGTATGAATCTGGACAGGGCGCTCCCCTGGACCACGAGCGGGTTGACGGCGAAGCGTTCAAT
GTCACGAACGATTCCCCAGTCTACTTCTGGGACATGACACGTGCTGCCTGGGCACTGACTGGCAAGGTCGTGGAG
CCTCACCAGGTGTGGGAGCTCCCCGAGGGCGTTCTGGGCCCTATTGGTGGAATTGCAGAGACGGTATTGGGACTC
CTCGGCAAGACACCTCGTTTAACTAGAAGAACGGTTCGCTACTCATGTATGACTCGTTACTACTCATGCGACAAG
GCCAAGTTCCGGCTCGGATATAGACCCGTTGTACCTGTGTACGAGGGTCTCGCTCGTGCAGTCGGGTATGTGGTG
GAACAGGAGCGGGTGGCCGGTGAAAAGAAGGCGTTGTGA
Gene >Ani_SJS100_1|g3604.t1
ATGTCTACTCGACGTCCTACAATGGAACTGGGCACTGTCCTAGTGGTTGGTGGCTGCGGGTTCGTGGGTTGGCAC
ATTGTTGATCAATTGCTCAATTTCCCTTCGGAGACAGACCCCAGTGCTGCTCTTCCCAAGCCCCAGAATGACCCT
AGGTTCATTTATCCCAAGCTAGGTGATCGATACCCTCGGTGCATCGCGAAAGTAGCAGTTGTCGACCTGCGAACG
ACCCACAACCGTCTCCCGGGAGCCGAGTATTATGATGGCGACATCACGTCCGAAGAGTCCATGTTGGCCGTTTTC
CGCGCGGTCAAGCCCGACGTCGTTATCCACACCGCTACGCCCAACGTTTTGGAAGGGAACAAGCCCTTGTTGCGT
AAGGTCAATGTTGACGGAACTAAAGTCTTGGTGGAAGTTGCGGGCGGTGCCCGTGGTGACTGGGGTGGAAAGTGC
AAAGCTTTTGTATACACCAGCTCGAGCTCTGTCGTGCACGATACCCAAAGCGACCTCATTAACGTCACCGAAGAG
TGGCCTCTCATCCGGGGGCCATTGCAACAAGAGTACTATTCAGAAACCAAGGTGAGTTATGTACCCCTATTGTTC
GTATGGCAGGTGCTGACTGGGATTCACCCTGTTAGGCGGACGCCGAAGAACTCGTCTTGAAGTATAACCGCGCCT
CTCCAACCTCGATGGTAACATGTGCCCTTCGCCCGGCTGGTATTTATGGTGAGAAGGATACGACCTTCACCTTCA
AGGTCCTGGAACACTCAGCCAAAGCCTCCCCGACCGTCCTCCGCATGCAATTAGGCGAGAACAACAACTTGTTTG
ATTTCACGTACGTTGGAAACATTGCATACGCTCATACTTTGGCTGCATACCGCTTGCTTGCTACCTACTCTCGGT
ATGAATCTGGACAGGGCGCTCCCCTGGACCACGAGCGGGTTGACGGCGAAGCGTTCAATGTCACGAACGATTCCC
CAGTCTACTTCTGGGACATGACACGTGCTGCCTGGGCACTGACTGGCAAGGTCGTGGAGCCTCACCAGGTGTGGG
AGCTCCCCGAGGGCGTTCTGGGCCCTATTGGTGGAATTGCAGAGACGGTATTGGGACTCCTCGGCAAGACACCTC
GTTTAACTAGAAGAACGGTTCGCTACTCATGTATGACTCGTTACTACTCATGCGACAAGGCCAAGTTCCGGCTCG
GATATAGACCCGTTGTACCTGTGTACGAGGGTCTCGCTCGTGCAGTCGGGTATGTGGTGGAACAGGAGCGGGTGG
CCGGTGAAAAGAAGGCGTTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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