© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g3587.t1 |
| Gene name | |
| Location | scaffold_016:372718..374723 |
| Strand | - |
| Gene length (bp) | 2005 |
| Transcript length (bp) | 1953 |
| Coding sequence length (bp) | 1953 |
| Protein length (aa) | 651 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02786 | CPSase_L_D2 | Carbamoyl-phosphate synthase L chain, ATP binding domain | 8.0E-52 | 119 | 323 |
| PF02785 | Biotin_carb_C | Biotin carboxylase C-terminal domain | 8.8E-31 | 341 | 451 |
| PF00289 | Biotin_carb_N | Biotin carboxylase, N-terminal domain | 6.8E-30 | 7 | 113 |
| PF00364 | Biotin_lipoyl | Biotin-requiring enzyme | 1.3E-10 | 575 | 641 |
| PF07478 | Dala_Dala_lig_C | D-ala D-ala ligase C-terminus | 1.8E-07 | 147 | 292 |
| PF02655 | ATP-grasp_3 | ATP-grasp domain | 2.0E-05 | 152 | 295 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005524 | ATP binding | Yes |
| GO:0046872 | metal ion binding | Yes |
| GO:0008716 | D-alanine-D-alanine ligase activity | Yes |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0043167 | ion binding | No |
| GO:0032555 | purine ribonucleotide binding | No |
| GO:0016879 | ligase activity, forming carbon-nitrogen bonds | No |
| GO:0097367 | carbohydrate derivative binding | No |
| GO:0003674 | molecular_function | No |
| GO:0016874 | ligase activity | No |
| GO:0017076 | purine nucleotide binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0032553 | ribonucleotide binding | No |
| GO:0000166 | nucleotide binding | No |
| GO:0035639 | purine ribonucleoside triphosphate binding | No |
| GO:0043169 | cation binding | No |
| GO:0016881 | acid-amino acid ligase activity | No |
| GO:0030554 | adenyl nucleotide binding | No |
| GO:0043168 | anion binding | No |
| GO:0003824 | catalytic activity | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0032559 | adenyl ribonucleotide binding | No |
| GO:0005488 | binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 38 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g3587.t1 MTSSEPFRRLLVANRGEIAVRIIQAARELSPPIEVYAIYTEDDTSHCDTAHPDHALLIPSVATYLDSPFLVRLAQ DNAIDAIHPGYGFLSESADFAARMQDAGITVIGPGSSVLSRTGDKLQAKQLAVECDVPVLPAMAQPTADVAEVRA FVKQVQYPVMVKAVDGGGGRGIRLVYGDEGLEGAVRGAVNESPSGMVFVEKAAVKGFRHVEVQIIGDGVEVRHLW ERDCSVQRRFQKVVEMAPSLIGDRGLVQRVVDAAVRMGRATRYRSLGTVEFLVNEGSGEFYFLEINPRIQVEHTV TEELMRVDLVQAQLKLAMGYTFAQLGLGDVGLDTPKACAIQLRLCAEDPSNQFALSVGKVTEMVVPSGRGVRVDT HIRAAGANPVVVGAQLDNLLAKIIVTASTWEGAVLKARRVLADTTVAGVRTNLELLRGVVAQEDFLSGRIDTQWL ESSLDQVLQQGASVSRSVRTQGPVQGQRPTALPSVPSSNLLFRRGDAWSIRLTPVEASQQSQQHRLQLTRVLRND FPTSLAADIEYQTPSSSGAYRLELAATSTTASALFSSAHRRGDLSNPRHIVLPLSGKLIEVLVSSGDHVAENQVI AFIKQMKMEVEVRSPRAGQAQWVYEMEDEEEDVAEGMLLVELTDGLQGKL* |
| Coding | >Ani_SJS100_1|g3587.t1 ATGACATCGTCTGAACCCTTCCGACGACTTCTAGTCGCCAACAGAGGTGAAATCGCCGTCCGCATCATTCAAGCC GCTCGCGAGCTCTCCCCACCCATAGAAGTATACGCTATCTATACCGAGGATGACACCTCGCACTGCGACACAGCC CACCCGGATCATGCTCTCCTCATTCCATCAGTGGCAACCTACCTCGACAGTCCCTTCCTAGTGCGTCTAGCTCAG GACAATGCCATCGACGCCATTCACCCAGGCTACGGCTTCCTAAGCGAAAGCGCGGACTTCGCTGCCCGCATGCAA GACGCCGGAATCACCGTAATAGGGCCCGGCAGCTCAGTATTATCTCGCACGGGAGACAAGCTCCAAGCGAAGCAA CTAGCCGTGGAGTGCGACGTTCCCGTCTTGCCGGCGATGGCGCAGCCGACGGCAGATGTTGCGGAGGTGCGGGCA TTTGTGAAGCAGGTGCAGTATCCTGTTATGGTGAAGGCCGTGGATGGGGGTGGGGGCCGGGGGATTCGGCTTGTG TATGGGGATGAGGGGTTGGAGGGTGCGGTGAGGGGTGCTGTTAACGAGTCGCCGTCGGGGATGGTGTTTGTGGAA AAGGCGGCTGTGAAGGGGTTTCGACATGTAGAGGTGCAGATTATTGGGGACGGGGTGGAGGTGAGGCATCTGTGG GAAAGGGATTGCAGTGTACAGAGGCGGTTTCAGAAGGTGGTTGAGATGGCGCCGTCATTGATTGGGGATCGGGGG CTAGTGCAGAGGGTGGTGGATGCTGCTGTGAGGATGGGGAGGGCTACAAGGTATAGGTCGCTGGGGACGGTGGAG TTTTTGGTGAATGAGGGGAGTGGGGAGTTTTATTTCTTGGAGATTAACCCCAGAATACAGGTTGAACATACGGTT ACTGAAGAGCTTATGAGGGTGGATCTTGTGCAGGCTCAGTTAAAACTGGCGATGGGGTATACGTTTGCACAGCTT GGGCTTGGGGATGTGGGGTTGGATACTCCTAAGGCTTGTGCTATTCAGCTCCGGTTGTGTGCGGAAGATCCGAGC AATCAGTTTGCCCTGAGTGTAGGGAAGGTAACTGAGATGGTTGTTCCGAGTGGCCGTGGTGTGAGAGTTGATACC CATATTCGTGCTGCTGGGGCGAACCCTGTTGTGGTAGGGGCGCAGTTGGACAATCTACTCGCTAAAATCATTGTC ACTGCATCTACTTGGGAGGGAGCAGTCCTCAAAGCCCGGCGAGTGCTTGCAGACACTACAGTGGCTGGTGTCCGG ACTAACTTGGAATTGCTGAGAGGGGTTGTTGCTCAGGAAGACTTCCTTTCTGGAAGGATAGACACACAATGGCTG GAGTCCAGTCTGGACCAAGTGCTCCAGCAGGGAGCAAGTGTCTCACGATCAGTTCGTACTCAGGGACCTGTGCAG GGACAGCGTCCCACTGCGTTGCCTAGTGTGCCTTCTTCGAATCTTCTATTTCGACGAGGAGATGCATGGTCAATC AGACTCACGCCAGTGGAGGCATCTCAGCAGTCACAGCAACATCGCCTCCAACTCACACGCGTGCTGCGGAATGAC TTTCCGACTTCGCTTGCAGCCGATATCGAGTATCAGACGCCCAGTTCTTCCGGTGCCTATCGACTAGAACTGGCT GCCACCTCGACCACAGCATCTGCCCTCTTTTCATCCGCTCATAGACGCGGAGACTTAAGTAACCCACGACACATT GTCCTTCCTTTATCTGGAAAGTTAATTGAAGTGCTTGTGTCTTCGGGGGATCATGTAGCTGAAAATCAGGTGATA GCGTTTATAAAGCAGATGAAGATGGAGGTGGAGGTGCGCAGTCCGCGCGCAGGGCAAGCACAATGGGTATATGAG ATGGAAGATGAAGAAGAGGATGTGGCAGAAGGGATGCTGTTGGTGGAGTTGACTGACGGGTTGCAAGGGAAGCTC TAG |
| Transcript | >Ani_SJS100_1|g3587.t1 ATGACATCGTCTGAACCCTTCCGACGACTTCTAGTCGCCAACAGAGGTGAAATCGCCGTCCGCATCATTCAAGCC GCTCGCGAGCTCTCCCCACCCATAGAAGTATACGCTATCTATACCGAGGATGACACCTCGCACTGCGACACAGCC CACCCGGATCATGCTCTCCTCATTCCATCAGTGGCAACCTACCTCGACAGTCCCTTCCTAGTGCGTCTAGCTCAG GACAATGCCATCGACGCCATTCACCCAGGCTACGGCTTCCTAAGCGAAAGCGCGGACTTCGCTGCCCGCATGCAA GACGCCGGAATCACCGTAATAGGGCCCGGCAGCTCAGTATTATCTCGCACGGGAGACAAGCTCCAAGCGAAGCAA CTAGCCGTGGAGTGCGACGTTCCCGTCTTGCCGGCGATGGCGCAGCCGACGGCAGATGTTGCGGAGGTGCGGGCA TTTGTGAAGCAGGTGCAGTATCCTGTTATGGTGAAGGCCGTGGATGGGGGTGGGGGCCGGGGGATTCGGCTTGTG TATGGGGATGAGGGGTTGGAGGGTGCGGTGAGGGGTGCTGTTAACGAGTCGCCGTCGGGGATGGTGTTTGTGGAA AAGGCGGCTGTGAAGGGGTTTCGACATGTAGAGGTGCAGATTATTGGGGACGGGGTGGAGGTGAGGCATCTGTGG GAAAGGGATTGCAGTGTACAGAGGCGGTTTCAGAAGGTGGTTGAGATGGCGCCGTCATTGATTGGGGATCGGGGG CTAGTGCAGAGGGTGGTGGATGCTGCTGTGAGGATGGGGAGGGCTACAAGGTATAGGTCGCTGGGGACGGTGGAG TTTTTGGTGAATGAGGGGAGTGGGGAGTTTTATTTCTTGGAGATTAACCCCAGAATACAGGTTGAACATACGGTT ACTGAAGAGCTTATGAGGGTGGATCTTGTGCAGGCTCAGTTAAAACTGGCGATGGGGTATACGTTTGCACAGCTT GGGCTTGGGGATGTGGGGTTGGATACTCCTAAGGCTTGTGCTATTCAGCTCCGGTTGTGTGCGGAAGATCCGAGC AATCAGTTTGCCCTGAGTGTAGGGAAGGTAACTGAGATGGTTGTTCCGAGTGGCCGTGGTGTGAGAGTTGATACC CATATTCGTGCTGCTGGGGCGAACCCTGTTGTGGTAGGGGCGCAGTTGGACAATCTACTCGCTAAAATCATTGTC ACTGCATCTACTTGGGAGGGAGCAGTCCTCAAAGCCCGGCGAGTGCTTGCAGACACTACAGTGGCTGGTGTCCGG ACTAACTTGGAATTGCTGAGAGGGGTTGTTGCTCAGGAAGACTTCCTTTCTGGAAGGATAGACACACAATGGCTG GAGTCCAGTCTGGACCAAGTGCTCCAGCAGGGAGCAAGTGTCTCACGATCAGTTCGTACTCAGGGACCTGTGCAG GGACAGCGTCCCACTGCGTTGCCTAGTGTGCCTTCTTCGAATCTTCTATTTCGACGAGGAGATGCATGGTCAATC AGACTCACGCCAGTGGAGGCATCTCAGCAGTCACAGCAACATCGCCTCCAACTCACACGCGTGCTGCGGAATGAC TTTCCGACTTCGCTTGCAGCCGATATCGAGTATCAGACGCCCAGTTCTTCCGGTGCCTATCGACTAGAACTGGCT GCCACCTCGACCACAGCATCTGCCCTCTTTTCATCCGCTCATAGACGCGGAGACTTAAGTAACCCACGACACATT GTCCTTCCTTTATCTGGAAAGTTAATTGAAGTGCTTGTGTCTTCGGGGGATCATGTAGCTGAAAATCAGGTGATA GCGTTTATAAAGCAGATGAAGATGGAGGTGGAGGTGCGCAGTCCGCGCGCAGGGCAAGCACAATGGGTATATGAG ATGGAAGATGAAGAAGAGGATGTGGCAGAAGGGATGCTGTTGGTGGAGTTGACTGACGGGTTGCAAGGGAAGCTC TAG |
| Gene | >Ani_SJS100_1|g3587.t1 ATGACATCGTCTGAACCCTTCCGACGACTTCTAGTCGCCAACAGGTACGCCATCGCCCAATCTCCACATTTACCT CATAAACTGACAATGAAACAGAGGTGAAATCGCCGTCCGCATCATTCAAGCCGCTCGCGAGCTCTCCCCACCCAT AGAAGTATACGCTATCTATACCGAGGATGACACCTCGCACTGCGACACAGCCCACCCGGATCATGCTCTCCTCAT TCCATCAGTGGCAACCTACCTCGACAGTCCCTTCCTAGTGCGTCTAGCTCAGGACAATGCCATCGACGCCATTCA CCCAGGCTACGGCTTCCTAAGCGAAAGCGCGGACTTCGCTGCCCGCATGCAAGACGCCGGAATCACCGTAATAGG GCCCGGCAGCTCAGTATTATCTCGCACGGGAGACAAGCTCCAAGCGAAGCAACTAGCCGTGGAGTGCGACGTTCC CGTCTTGCCGGCGATGGCGCAGCCGACGGCAGATGTTGCGGAGGTGCGGGCATTTGTGAAGCAGGTGCAGTATCC TGTTATGGTGAAGGCCGTGGATGGGGGTGGGGGCCGGGGGATTCGGCTTGTGTATGGGGATGAGGGGTTGGAGGG TGCGGTGAGGGGTGCTGTTAACGAGTCGCCGTCGGGGATGGTGTTTGTGGAAAAGGCGGCTGTGAAGGGGTTTCG ACATGTAGAGGTGCAGATTATTGGGGACGGGGTGGAGGTGAGGCATCTGTGGGAAAGGGATTGCAGTGTACAGAG GCGGTTTCAGAAGGTGGTTGAGATGGCGCCGTCATTGATTGGGGATCGGGGGCTAGTGCAGAGGGTGGTGGATGC TGCTGTGAGGATGGGGAGGGCTACAAGGTATAGGTCGCTGGGGACGGTGGAGTTTTTGGTGAATGAGGGGAGTGG GGAGTTTTATTTCTTGGAGATTAACCCCAGAATACAGGTTGAACATACGGTTACTGAAGAGCTTATGAGGGTGGA TCTTGTGCAGGCTCAGTTAAAACTGGCGATGGGGTATACGTTTGCACAGCTTGGGCTTGGGGATGTGGGGTTGGA TACTCCTAAGGCTTGTGCTATTCAGCTCCGGTTGTGTGCGGAAGATCCGAGCAATCAGTTTGCCCTGAGTGTAGG GAAGGTAACTGAGATGGTTGTTCCGAGTGGCCGTGGTGTGAGAGTTGATACCCATATTCGTGCTGCTGGGGCGAA CCCTGTTGTGGTAGGGGCGCAGTTGGACAATCTACTCGCTAAAATCATTGTCACTGCATCTACTTGGGAGGGAGC AGTCCTCAAAGCCCGGCGAGTGCTTGCAGACACTACAGTGGCTGGTGTCCGGACTAACTTGGAATTGCTGAGAGG GGTTGTTGCTCAGGAAGACTTCCTTTCTGGAAGGATAGACACACAATGGCTGGAGTCCAGTCTGGACCAAGTGCT CCAGCAGGGAGCAAGTGTCTCACGATCAGTTCGTACTCAGGGACCTGTGCAGGGACAGCGTCCCACTGCGTTGCC TAGTGTGCCTTCTTCGAATCTTCTATTTCGACGAGGAGATGCATGGTCAATCAGACTCACGCCAGTGGAGGCATC TCAGCAGTCACAGCAACATCGCCTCCAACTCACACGCGTGCTGCGGAATGACTTTCCGACTTCGCTTGCAGCCGA TATCGAGTATCAGACGCCCAGTTCTTCCGGTGCCTATCGACTAGAACTGGCTGCCACCTCGACCACAGCATCTGC CCTCTTTTCATCCGCTCATAGACGCGGAGACTTAAGTAACCCACGACACATTGTCCTTCCTTTATCTGGAAAGTT AATTGAAGTGCTTGTGTCTTCGGGGGATCATGTAGCTGAAAATCAGGTGATAGCGTTTATAAAGCAGATGAAGAT GGAGGTGGAGGTGCGCAGTCCGCGCGCAGGGCAAGCACAATGGGTATATGAGATGGAAGATGAAGAAGAGGATGT GGCAGAAGGGATGCTGTTGGTGGAGTTGACTGACGGGTTGCAAGGGAAGCTCTAG |