Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g3580.t1
Gene name
Locationscaffold_016:348495..349932
Strand+
Gene length (bp)1437
Transcript length (bp)423
Coding sequence length (bp)423
Protein length (aa) 141

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 49 0.5

Transmembrane Domains

Domain # Start End Length
1 25 47 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g3580.t1
MPDPKIGSPLPIGQHCHYVSDQLMLQAPFVLALLPTIILGIICRLALGGPYRPGAGTAATYERSVLTGGEPEANG
APNNLIPLPGWWAPFLDLTHSGYPKISSDESSASNAHPLLFDGRELFQPRGVAKIGSQAGNEIVA*
Coding >Ani_SJS100_1|g3580.t1
ATGCCAGATCCCAAGATCGGCTCCCCCCTCCCAATCGGCCAGCATTGCCATTACGTATCCGATCAATTAATGCTT
CAGGCACCATTTGTTTTGGCTCTGCTGCCCACAATAATTTTGGGAATTATTTGCCGTTTAGCCTTGGGGGGACCT
TACCGTCCTGGTGCAGGCACAGCTGCGACTTACGAACGGTCGGTGCTGACCGGAGGGGAACCTGAGGCGAACGGT
GCCCCGAATAATTTAATTCCCCTGCCGGGGTGGTGGGCTCCTTTTCTTGACCTAACTCACTCCGGGTACCCCAAG
ATTAGTAGTGACGAATCATCAGCCAGCAACGCGCATCCCCTGTTGTTTGACGGTCGCGAACTCTTCCAGCCCCGA
GGTGTTGCGAAGATCGGGTCGCAGGCCGGCAACGAGATCGTCGCATAA
Transcript >Ani_SJS100_1|g3580.t1
ATGCCAGATCCCAAGATCGGCTCCCCCCTCCCAATCGGCCAGCATTGCCATTACGTATCCGATCAATTAATGCTT
CAGGCACCATTTGTTTTGGCTCTGCTGCCCACAATAATTTTGGGAATTATTTGCCGTTTAGCCTTGGGGGGACCT
TACCGTCCTGGTGCAGGCACAGCTGCGACTTACGAACGGTCGGTGCTGACCGGAGGGGAACCTGAGGCGAACGGT
GCCCCGAATAATTTAATTCCCCTGCCGGGGTGGTGGGCTCCTTTTCTTGACCTAACTCACTCCGGGTACCCCAAG
ATTAGTAGTGACGAATCATCAGCCAGCAACGCGCATCCCCTGTTGTTTGACGGTCGCGAACTCTTCCAGCCCCGA
GGTGTTGCGAAGATCGGGTCGCAGGCCGGCAACGAGATCGTCGCATAA
Gene >Ani_SJS100_1|g3580.t1
ATGCCAGATCCCAAGATCGGCTCCCCCCTCCCAATCGGCCAGCATTGCCATTACGTATCCGATCAATTAATGCTT
CAGGCACCATTTGTTTTGGCTCTGCTGCCCACAATAATTTTGGGAATTATTTGCCGTTTAGCCTTGGGGGGACCT
TACCGTCCTGGTGCAGGCACAGCTGCGACTTACGAGTGAGTAGACTTAGCAGGGGCAAAGAGGAAGAGAGACAGA
GCCAGAGCCAGGCATAACTAGAGGGGGGGAAATCTGAGACTTGAGACTTGAGACAGACTATCTACTTGTTAGACG
GTCGGTGCTGACCGGAGGGGAACCTGAGGCGAACGGTGCCCCGAATAATTTAATTCCCCTGCCGGGGTGGTGGGC
TCCTTTTCTTGAGTGAGTTCCTTTCTGGTGGCTCCCCTCGTTCCTCACAATTACTGCTAACAGCCTAACTCACTC
CGGGTACCCCAAGATTAGTAGTGAGTGAGTAGTGAGTTAGTGAGGTAGTTAGGCTAGTTAGTTGTTATTCTGGTT
AGGGTGACTGACTCTTGTCCATCCGTCCCTCTCTTCCCTCTCCCTCCCTCCCTCTCTTTCCCCCGCCCAACGAAC
GAGTCGCCCTCGTCTCGTTGACCAACAACAACAACATCAACAACTGGCACTCGCTGCCTTGAATCACTCCCTCAT
TTTTCCCCTTCCCCTCTCCCCTTCCACCACTTCAATCCCCCTTCCAATTGCCCTTTCCCTTTTTTCCTTGTGTCT
ACTTCCCCTTCGGACTTACCAACTTCTTACTTTGCTTTTCTCTTCTTTCCCTACTTACCCTTCCTTTCGCATTGA
ACCCTGGTCCTTCCTTTTCTTCTACCACGTCATTTCACTCTTAATAATCCCTACTTATCTTTTCTTGATCTTATC
TATTGATTGTATAGTGTGGACGCTTCATTGCATCCGCCTGTACCCGTAATTTCCTGGATCCTTCCCTCCGTCCTT
TGGTTCTTATTCTGCGCCCGCTTCTCGGCGACTCCCTTGTTTCGCCCGCACGCCGCTGCCTCGTCCCGAAGGCGC
ACATCTGGTCGCACACGCACAAGGTTACTCTGCGTTTGCTAGACAGGTACGCGTTTGTTGTTCGAAGCTTCCTTG
GGAGCAGGTTTTCAGTCCCTTGCTCCAAAGTCTTTTCGTCACAAGCGAGGCGTAACCGCCACCCTTCGGCTCCCG
GTATCGTATTCCGCCGATACCAAGTGTTTTTGTTGTCTTCTTCGGTCGGCAATCGACGCGGCCACCGCAGCGAAT
CATCAGCCAGCAACGCGCATCCCCTGTTGTTTGACGGTCGCGAACTCTTCCAGCCCCGAGGTGTTGCGAAGATCG
GGTCGCAGGTCGGCTCACCGAATCGCCATTCGCATTGAAGAGGAACTAAGATTAAGCAAGCAGGCCGGCAACGAG
ATCGTCGCATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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