Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g3548.t1
Gene name
Locationscaffold_016:266926..268426
Strand+
Gene length (bp)1500
Transcript length (bp)1500
Coding sequence length (bp)1500
Protein length (aa) 500

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09206 ArabFuran-catal Alpha-L-arabinofuranosidase B, catalytic 4.4E-148 20 333
PF05270 AbfB Alpha-L-arabinofuranosidase B (ABFB) domain 9.3E-56 352 493

GO

GO Term Description Terminal node
GO:0031221 arabinan metabolic process Yes
GO:0046556 alpha-L-arabinofuranosidase activity Yes
GO:0046373 L-arabinose metabolic process Yes
GO:0005976 polysaccharide metabolic process No
GO:0071704 organic substance metabolic process No
GO:0043170 macromolecule metabolic process No
GO:0044238 primary metabolic process No
GO:0005975 carbohydrate metabolic process No
GO:0003674 molecular_function No
GO:0016787 hydrolase activity No
GO:0008152 metabolic process No
GO:0005996 monosaccharide metabolic process No
GO:0044281 small molecule metabolic process No
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds No
GO:0008150 biological_process No
GO:0003824 catalytic activity No
GO:0016798 hydrolase activity, acting on glycosyl bonds No
GO:0019566 arabinose metabolic process No
GO:0019321 pentose metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g3548.t1
MFSRRNLVALGLAATVSAGPCDIYEAGDTPCVAAHSTTRALYSSFSGALYQLQRGSDDTTTTISPLTAGGVADAS
AQDTFCANTTCLITIIYDQSGNGNHLTQAPPGGFDGPDVDGYDNLASAIGAPVTLNGQKAYGVFMSPGTGYRNNE
ATGTATGDEPEGMYAVLDGTHYNDACCFDYGNAETSSTDTGAGHMEAIYLGNSTTWGYGAGDGPWIMVDMENNLF
SGADEGYNSGDPSISYSFVTAAVKGGADKWAIRGGNAASGSLSTYYSGARPDYSGYNPMSKEGAIILGIGGDNSN
GAQGTFYEGVMTSGYPSDDVENSVQENIVAAKYVSGSLVSGPSFTSGEVVSLRVTTPGYTTRYIAHTDTTVNTQV
VDDDSSTTLKEEASWTVVTGLANSQCFSFESVDTPGSYIRHYNFELLLNANDGTKQFHEDATFCPQAPLNGEGTS
LRSWSYPTRYFRHYENVLYAASNGGVQTFDSKTSFNNDVSFEIETAFAS*
Coding >Ani_SJS100_1|g3548.t1
ATGTTCTCCCGCCGAAACCTCGTCGCCCTAGGGCTGGCAGCCACCGTCAGCGCCGGCCCCTGTGACATCTACGAA
GCCGGCGACACGCCCTGCGTAGCCGCGCACAGCACCACCCGCGCCCTATACAGCTCCTTCAGCGGCGCCCTCTAC
CAGCTCCAACGTGGCTCCGACGACACCACCACCACCATCTCCCCGCTCACAGCCGGCGGCGTCGCCGACGCCTCC
GCCCAAGACACCTTCTGTGCCAACACCACCTGCTTGATCACCATCATCTACGACCAATCCGGCAACGGCAACCAC
CTGACCCAAGCACCCCCGGGAGGCTTCGACGGCCCCGACGTCGACGGCTACGACAACCTCGCCAGCGCCATCGGC
GCCCCCGTCACCCTCAATGGCCAAAAGGCCTACGGCGTGTTCATGTCCCCCGGCACGGGCTACCGTAACAACGAA
GCCACCGGCACTGCCACCGGCGACGAGCCCGAAGGCATGTACGCCGTCCTGGACGGCACGCACTACAACGACGCC
TGCTGCTTCGACTACGGCAACGCCGAGACCAGCAGCACCGACACTGGCGCCGGCCACATGGAGGCCATCTACCTC
GGGAACAGCACCACCTGGGGCTACGGCGCCGGCGACGGGCCCTGGATCATGGTCGATATGGAGAACAACCTCTTC
TCCGGTGCTGATGAGGGATATAACTCCGGTGATCCCTCGATCAGCTACAGCTTTGTCACTGCCGCGGTCAAGGGC
GGGGCTGATAAGTGGGCTATTCGCGGTGGTAATGCTGCCTCTGGGTCCCTCTCTACTTACTACAGCGGCGCTCGC
CCGGATTACTCCGGCTATAACCCCATGAGCAAGGAGGGCGCTATCATCCTGGGTATCGGCGGTGACAACAGCAAC
GGCGCCCAGGGTACCTTCTACGAGGGTGTCATGACCTCCGGCTACCCGTCGGACGATGTCGAGAACTCCGTCCAG
GAGAACATCGTGGCTGCGAAATATGTCTCCGGCTCGCTGGTCAGCGGCCCGTCGTTCACCTCTGGAGAGGTGGTC
TCGCTGCGTGTCACTACGCCCGGTTACACGACGCGGTATATTGCGCACACTGACACCACTGTGAACACGCAGGTC
GTGGACGACGATAGTTCCACCACGCTGAAGGAGGAGGCTAGTTGGACGGTGGTGACCGGCCTGGCTAATAGTCAG
TGCTTCTCGTTCGAGTCGGTTGATACCCCCGGTAGCTATATCCGGCATTACAACTTTGAGTTGCTGCTTAATGCC
AATGATGGCACGAAGCAGTTCCATGAGGATGCTACTTTCTGTCCTCAGGCGCCGTTGAATGGAGAGGGTACTTCG
TTGAGATCGTGGAGTTATCCGACGAGGTATTTCAGGCATTATGAGAATGTCCTGTATGCTGCTAGTAATGGTGGT
GTGCAAACGTTTGATTCCAAGACGTCGTTTAATAATGATGTTAGCTTTGAGATTGAGACGGCGTTTGCTTCGTAA
Transcript >Ani_SJS100_1|g3548.t1
ATGTTCTCCCGCCGAAACCTCGTCGCCCTAGGGCTGGCAGCCACCGTCAGCGCCGGCCCCTGTGACATCTACGAA
GCCGGCGACACGCCCTGCGTAGCCGCGCACAGCACCACCCGCGCCCTATACAGCTCCTTCAGCGGCGCCCTCTAC
CAGCTCCAACGTGGCTCCGACGACACCACCACCACCATCTCCCCGCTCACAGCCGGCGGCGTCGCCGACGCCTCC
GCCCAAGACACCTTCTGTGCCAACACCACCTGCTTGATCACCATCATCTACGACCAATCCGGCAACGGCAACCAC
CTGACCCAAGCACCCCCGGGAGGCTTCGACGGCCCCGACGTCGACGGCTACGACAACCTCGCCAGCGCCATCGGC
GCCCCCGTCACCCTCAATGGCCAAAAGGCCTACGGCGTGTTCATGTCCCCCGGCACGGGCTACCGTAACAACGAA
GCCACCGGCACTGCCACCGGCGACGAGCCCGAAGGCATGTACGCCGTCCTGGACGGCACGCACTACAACGACGCC
TGCTGCTTCGACTACGGCAACGCCGAGACCAGCAGCACCGACACTGGCGCCGGCCACATGGAGGCCATCTACCTC
GGGAACAGCACCACCTGGGGCTACGGCGCCGGCGACGGGCCCTGGATCATGGTCGATATGGAGAACAACCTCTTC
TCCGGTGCTGATGAGGGATATAACTCCGGTGATCCCTCGATCAGCTACAGCTTTGTCACTGCCGCGGTCAAGGGC
GGGGCTGATAAGTGGGCTATTCGCGGTGGTAATGCTGCCTCTGGGTCCCTCTCTACTTACTACAGCGGCGCTCGC
CCGGATTACTCCGGCTATAACCCCATGAGCAAGGAGGGCGCTATCATCCTGGGTATCGGCGGTGACAACAGCAAC
GGCGCCCAGGGTACCTTCTACGAGGGTGTCATGACCTCCGGCTACCCGTCGGACGATGTCGAGAACTCCGTCCAG
GAGAACATCGTGGCTGCGAAATATGTCTCCGGCTCGCTGGTCAGCGGCCCGTCGTTCACCTCTGGAGAGGTGGTC
TCGCTGCGTGTCACTACGCCCGGTTACACGACGCGGTATATTGCGCACACTGACACCACTGTGAACACGCAGGTC
GTGGACGACGATAGTTCCACCACGCTGAAGGAGGAGGCTAGTTGGACGGTGGTGACCGGCCTGGCTAATAGTCAG
TGCTTCTCGTTCGAGTCGGTTGATACCCCCGGTAGCTATATCCGGCATTACAACTTTGAGTTGCTGCTTAATGCC
AATGATGGCACGAAGCAGTTCCATGAGGATGCTACTTTCTGTCCTCAGGCGCCGTTGAATGGAGAGGGTACTTCG
TTGAGATCGTGGAGTTATCCGACGAGGTATTTCAGGCATTATGAGAATGTCCTGTATGCTGCTAGTAATGGTGGT
GTGCAAACGTTTGATTCCAAGACGTCGTTTAATAATGATGTTAGCTTTGAGATTGAGACGGCGTTTGCTTCGTAA
Gene >Ani_SJS100_1|g3548.t1
ATGTTCTCCCGCCGAAACCTCGTCGCCCTAGGGCTGGCAGCCACCGTCAGCGCCGGCCCCTGTGACATCTACGAA
GCCGGCGACACGCCCTGCGTAGCCGCGCACAGCACCACCCGCGCCCTATACAGCTCCTTCAGCGGCGCCCTCTAC
CAGCTCCAACGTGGCTCCGACGACACCACCACCACCATCTCCCCGCTCACAGCCGGCGGCGTCGCCGACGCCTCC
GCCCAAGACACCTTCTGTGCCAACACCACCTGCTTGATCACCATCATCTACGACCAATCCGGCAACGGCAACCAC
CTGACCCAAGCACCCCCGGGAGGCTTCGACGGCCCCGACGTCGACGGCTACGACAACCTCGCCAGCGCCATCGGC
GCCCCCGTCACCCTCAATGGCCAAAAGGCCTACGGCGTGTTCATGTCCCCCGGCACGGGCTACCGTAACAACGAA
GCCACCGGCACTGCCACCGGCGACGAGCCCGAAGGCATGTACGCCGTCCTGGACGGCACGCACTACAACGACGCC
TGCTGCTTCGACTACGGCAACGCCGAGACCAGCAGCACCGACACTGGCGCCGGCCACATGGAGGCCATCTACCTC
GGGAACAGCACCACCTGGGGCTACGGCGCCGGCGACGGGCCCTGGATCATGGTCGATATGGAGAACAACCTCTTC
TCCGGTGCTGATGAGGGATATAACTCCGGTGATCCCTCGATCAGCTACAGCTTTGTCACTGCCGCGGTCAAGGGC
GGGGCTGATAAGTGGGCTATTCGCGGTGGTAATGCTGCCTCTGGGTCCCTCTCTACTTACTACAGCGGCGCTCGC
CCGGATTACTCCGGCTATAACCCCATGAGCAAGGAGGGCGCTATCATCCTGGGTATCGGCGGTGACAACAGCAAC
GGCGCCCAGGGTACCTTCTACGAGGGTGTCATGACCTCCGGCTACCCGTCGGACGATGTCGAGAACTCCGTCCAG
GAGAACATCGTGGCTGCGAAATATGTCTCCGGCTCGCTGGTCAGCGGCCCGTCGTTCACCTCTGGAGAGGTGGTC
TCGCTGCGTGTCACTACGCCCGGTTACACGACGCGGTATATTGCGCACACTGACACCACTGTGAACACGCAGGTC
GTGGACGACGATAGTTCCACCACGCTGAAGGAGGAGGCTAGTTGGACGGTGGTGACCGGCCTGGCTAATAGTCAG
TGCTTCTCGTTCGAGTCGGTTGATACCCCCGGTAGCTATATCCGGCATTACAACTTTGAGTTGCTGCTTAATGCC
AATGATGGCACGAAGCAGTTCCATGAGGATGCTACTTTCTGTCCTCAGGCGCCGTTGAATGGAGAGGGTACTTCG
TTGAGATCGTGGAGTTATCCGACGAGGTATTTCAGGCATTATGAGAATGTCCTGTATGCTGCTAGTAATGGTGGT
GTGCAAACGTTTGATTCCAAGACGTCGTTTAATAATGATGTTAGCTTTGAGATTGAGACGGCGTTTGCTTCGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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