© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g3520.t1 |
| Gene name | |
| Location | scaffold_016:173743..175419 |
| Strand | - |
| Gene length (bp) | 1676 |
| Transcript length (bp) | 1560 |
| Coding sequence length (bp) | 1560 |
| Protein length (aa) | 520 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13520 | AA_permease_2 | Amino acid permease | 9.7E-53 | 41 | 484 |
| PF00324 | AA_permease | Amino acid permease | 1.2E-21 | 59 | 490 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 67 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 40 | 62 | 22 |
| 2 | 72 | 94 | 22 |
| 3 | 129 | 151 | 22 |
| 4 | 166 | 185 | 19 |
| 5 | 197 | 219 | 22 |
| 6 | 239 | 261 | 22 |
| 7 | 274 | 296 | 22 |
| 8 | 326 | 348 | 22 |
| 9 | 379 | 401 | 22 |
| 10 | 405 | 427 | 22 |
| 11 | 439 | 461 | 22 |
| 12 | 476 | 495 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g3520.t1 MERPKTNVSAASPASDHSTHLDDDARRLAEMGYTQDMQRNFSVLSLLGVAFSLANSWFGISASLITGINSGGTVL TIYGIPWIAFVSTCVGVSLSELASAMPNAGGQYFWASELAPRKYASFASYLTGWLAWAGAIFTCASVALSLASAG VGMWQLTHPDFTPQPWHSVVAYQLVNFFAYLFNCVGKVLPTVATTTLYISLISFVVILITVPAAAPTHSSAEFVF AHFVNSTGWPSDGIAFLVGLINPNWIFACLDSATHLAEEVGQPERSIPIAILCTVLIGFVTSWTYCISMFFSLNN LDEILNSPTGVPILALYYQALQNKAGAIVLETLLFVTGIGCQIACHTWQSRLCWSFARDRGLPWSAFLSQVHPTL DVPLNAHSVSCFIVGLLGLLYLGSSTAFNSMVTACIVLLYASYVVPIVCLLWRGRSTLKHGPFWLGRLGLVCNII VLAWTLFCLVIYSFPSVYPVTTGNMNYVSAVYGVVAVLIALDWVLRGRRSFRGQTARHMEAAEASLTQD* |
| Coding | >Ani_SJS100_1|g3520.t1 ATGGAACGACCCAAGACCAACGTGTCCGCAGCTAGTCCGGCCAGCGACCATTCTACACACCTCGACGATGATGCG AGGAGACTGGCGGAGATGGGCTATACCCAGGACATGCAGCGGAACTTCTCCGTGCTGTCGCTCCTCGGGGTCGCC TTCTCCCTGGCAAACTCATGGTTCGGTATCTCCGCGTCCTTGATCACAGGCATTAACTCTGGAGGCACCGTGTTG ACCATCTACGGCATCCCCTGGATCGCTTTTGTTTCGACCTGCGTTGGAGTCAGCCTGTCCGAATTGGCATCGGCC ATGCCGAACGCAGGTGGCCAATATTTTTGGGCCAGTGAGCTGGCGCCGAGGAAATATGCGTCGTTCGCATCATAT CTGACAGGCTGGTTGGCTTGGGCGGGCGCCATTTTTACCTGCGCCAGTGTTGCGTTAAGCCTGGCCTCTGCTGGT GTTGGCATGTGGCAGCTAACACATCCGGACTTTACCCCTCAACCATGGCATTCAGTGGTAGCCTACCAGCTGGTC AACTTCTTCGCCTATTTGTTCAATTGCGTCGGCAAAGTCCTTCCTACCGTGGCCACCACAACCCTATACATATCC CTCATCTCGTTCGTTGTCATCTTGATCACCGTTCCTGCGGCAGCTCCCACACACAGTTCGGCTGAGTTCGTCTTT GCTCACTTTGTAAACTCGACGGGCTGGCCCTCTGATGGGATTGCGTTCCTCGTGGGTCTGATCAATCCCAACTGG ATATTCGCATGTCTTGATTCGGCCACCCATTTGGCTGAGGAAGTTGGGCAACCTGAGCGTAGCATTCCCATTGCG ATCCTCTGCACCGTATTGATTGGCTTTGTCACCTCATGGACCTACTGCATCTCCATGTTTTTCAGCCTGAACAAC CTCGATGAGATCCTCAATAGCCCGACCGGAGTGCCCATCCTCGCACTGTATTACCAAGCCTTGCAGAACAAAGCT GGCGCCATTGTGCTCGAGACGTTGCTTTTTGTCACGGGTATCGGATGCCAGATTGCCTGTCATACCTGGCAATCT CGCCTATGCTGGTCCTTTGCACGAGACCGGGGCCTACCCTGGTCGGCGTTTCTGTCCCAGGTTCATCCCACACTT GATGTCCCACTTAACGCGCACAGCGTGAGCTGCTTTATAGTGGGTCTTCTAGGGCTGCTGTACCTTGGTTCGTCG ACTGCCTTCAACAGCATGGTCACTGCGTGCATTGTGTTACTCTACGCCTCGTACGTGGTGCCGATTGTCTGCTTG CTGTGGCGCGGTCGGAGTACTCTCAAGCACGGTCCTTTCTGGCTTGGGAGACTCGGCCTGGTGTGTAATATTATT GTTCTAGCATGGACCTTGTTCTGCTTGGTTATATATTCCTTTCCGTCGGTATATCCGGTTACCACGGGCAATATG AACTATGTCTCCGCGGTATATGGGGTGGTTGCTGTGCTGATTGCCCTCGATTGGGTGTTGCGGGGACGCCGGTCC TTCCGGGGACAGACGGCGCGACACATGGAGGCGGCGGAGGCGAGTCTCACTCAAGACTGA |
| Transcript | >Ani_SJS100_1|g3520.t1 ATGGAACGACCCAAGACCAACGTGTCCGCAGCTAGTCCGGCCAGCGACCATTCTACACACCTCGACGATGATGCG AGGAGACTGGCGGAGATGGGCTATACCCAGGACATGCAGCGGAACTTCTCCGTGCTGTCGCTCCTCGGGGTCGCC TTCTCCCTGGCAAACTCATGGTTCGGTATCTCCGCGTCCTTGATCACAGGCATTAACTCTGGAGGCACCGTGTTG ACCATCTACGGCATCCCCTGGATCGCTTTTGTTTCGACCTGCGTTGGAGTCAGCCTGTCCGAATTGGCATCGGCC ATGCCGAACGCAGGTGGCCAATATTTTTGGGCCAGTGAGCTGGCGCCGAGGAAATATGCGTCGTTCGCATCATAT CTGACAGGCTGGTTGGCTTGGGCGGGCGCCATTTTTACCTGCGCCAGTGTTGCGTTAAGCCTGGCCTCTGCTGGT GTTGGCATGTGGCAGCTAACACATCCGGACTTTACCCCTCAACCATGGCATTCAGTGGTAGCCTACCAGCTGGTC AACTTCTTCGCCTATTTGTTCAATTGCGTCGGCAAAGTCCTTCCTACCGTGGCCACCACAACCCTATACATATCC CTCATCTCGTTCGTTGTCATCTTGATCACCGTTCCTGCGGCAGCTCCCACACACAGTTCGGCTGAGTTCGTCTTT GCTCACTTTGTAAACTCGACGGGCTGGCCCTCTGATGGGATTGCGTTCCTCGTGGGTCTGATCAATCCCAACTGG ATATTCGCATGTCTTGATTCGGCCACCCATTTGGCTGAGGAAGTTGGGCAACCTGAGCGTAGCATTCCCATTGCG ATCCTCTGCACCGTATTGATTGGCTTTGTCACCTCATGGACCTACTGCATCTCCATGTTTTTCAGCCTGAACAAC CTCGATGAGATCCTCAATAGCCCGACCGGAGTGCCCATCCTCGCACTGTATTACCAAGCCTTGCAGAACAAAGCT GGCGCCATTGTGCTCGAGACGTTGCTTTTTGTCACGGGTATCGGATGCCAGATTGCCTGTCATACCTGGCAATCT CGCCTATGCTGGTCCTTTGCACGAGACCGGGGCCTACCCTGGTCGGCGTTTCTGTCCCAGGTTCATCCCACACTT GATGTCCCACTTAACGCGCACAGCGTGAGCTGCTTTATAGTGGGTCTTCTAGGGCTGCTGTACCTTGGTTCGTCG ACTGCCTTCAACAGCATGGTCACTGCGTGCATTGTGTTACTCTACGCCTCGTACGTGGTGCCGATTGTCTGCTTG CTGTGGCGCGGTCGGAGTACTCTCAAGCACGGTCCTTTCTGGCTTGGGAGACTCGGCCTGGTGTGTAATATTATT GTTCTAGCATGGACCTTGTTCTGCTTGGTTATATATTCCTTTCCGTCGGTATATCCGGTTACCACGGGCAATATG AACTATGTCTCCGCGGTATATGGGGTGGTTGCTGTGCTGATTGCCCTCGATTGGGTGTTGCGGGGACGCCGGTCC TTCCGGGGACAGACGGCGCGACACATGGAGGCGGCGGAGGCGAGTCTCACTCAAGACTGA |
| Gene | >Ani_SJS100_1|g3520.t1 ATGGAACGACCCAAGACCAACGTGTCCGCAGCTAGTCCGGCCAGCGACCATTCTACACACCTCGACGATGATGCG AGGAGACTGGCGGAGATGGGCTATACCCAGGACATGCAGCGGAACTTCTCCGTGCTGTCGCTCCTCGGGGTCGCC TTCTCCCTGGCAAACTCATGGTTCGGTATCTCCGCGTCCTTGATCACAGGCATTAACTCTGGAGGCACCGTGTTG ACCATCTACGGCATCCCCTGGATCGCTTTTGTTTCGACCTGCGTTGGAGTCAGCCTGTCCGAATTGGCATCGGCC ATGCCGAACGCAGGTGGCCAATATTTTTGGGCCAGTGAGCTGGCGCCGAGGAAATATGCGTCGTTCGCATCATAT CTGACAGGCTGGTTGGCTTGGGCGGGCGCCATTTTTACCTGCGCCAGTGTTGCGTTAAGCCTGGCCTCTGCTGGT GTTGGCATGTGGCAGCTAACACATCCGGACTTGTATGTTCTTGTTAAAGATTGGATTGCGACTTTTCTAACGATA TAGTACCCCTCAACCATGGCATTCAGTGGTAGCCTACCAGCTGGTCAACTTCTTCGCCTATTTGTTCAATTGCGT CGGCAAAGTCCTTCCTACCGTGGCCACCACAACCCTATACATATCCCTCATCTCGTTCGTTGTCATCTTGATCAC CGTTCCTGCGGCAGCTCCCACACACAGTTCGGCTGAGTTCGTCTTTGCTCACTTTGTAAACTCGACGGGCTGGCC CTCTGATGGGATTGCGTTCCTCGTGGGTCTGATCAATCCCAACTGGATATTCGCATGTCTTGATTCGGCCACCCA TTTGGCTGAGGAAGTTGGGCAACCTGAGCGTAGCATTCCCATTGCGATCCTCTGCACCGTATTGATTGGCTTTGT CACCTCATGGACCTACTGCATCTCCATGTTTTTCAGCCTGAACAACCTCGATGAGATCCTCAATAGCCCGACCGG AGTGCCCATCCTCGCACTGTATTACCAAGCCTTGCAGAACAAAGCTGGCGCCATTGTGCTCGAGACGTTGCTTTT TGTCACGGGTATCGGATGCCAGATTGCCTGTCATACCTGGCAATCTCGCCTATGCTGGTCCTTTGCACGAGACCG GGGCCTACCCTGGTCGGCGTTTCTGTCCCAGGTTCATCCCACACTTGATGTCCCACTTAACGCGCACAGCGTGAG CTGCTTTATAGTGGGTCTTCTAGGGCTGCTGTACCTTGGTTCGTCGACTGCCTTCAACAGCATGGTCACTGCGTG CATTGTGTTACTCTACGCCTCGTACGTGGTGCCGATTGTCTGCTTGCTGTGGCGCGGTCGGAGTACTCTCAAGCA CGGTCCTTTCTGGCTTGGGAGACTCGGCCTGGTGTGTAATATTATTGTTCTAGCATGGACCTTGTTCTGCTTGGT TATATATTCCTTTCCGTCGGTATATCCGGTTACCACGGGCAGTAAGTCGCCTCCCAGAACAATACCCATTTATCC TTTCTCTTTTAACACGACTACTAATTCAGTGACTAGATATGAACTATGTCTCCGCGGTATATGGGGTGGTTGCTG TGCTGATTGCCCTCGATTGGGTGTTGCGGGGACGCCGGTCCTTCCGGGGACAGACGGCGCGACACATGGAGGCGG CGGAGGCGAGTCTCACTCAAGACTGA |