© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g3488.t1 |
| Gene name | |
| Location | scaffold_016:71218..72955 |
| Strand | + |
| Gene length (bp) | 1737 |
| Transcript length (bp) | 1665 |
| Coding sequence length (bp) | 1665 |
| Protein length (aa) | 555 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00083 | Sugar_tr | Sugar (and other) transporter | 2.7E-87 | 75 | 516 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.5E-27 | 78 | 448 |
| PF06609 | TRI12 | Fungal trichothecene efflux pump (TRI12) | 1.8E-06 | 107 | 253 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 66 | 85 | 19 |
| 2 | 138 | 157 | 19 |
| 3 | 162 | 184 | 22 |
| 4 | 197 | 219 | 22 |
| 5 | 224 | 246 | 22 |
| 6 | 315 | 337 | 22 |
| 7 | 352 | 374 | 22 |
| 8 | 381 | 400 | 19 |
| 9 | 415 | 437 | 22 |
| 10 | 479 | 501 | 22 |
| Orthofinder run ID | 3 |
| Orthogroup | 3774 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g3488.t1 MGVVHDLDTSHDDHKEGTALEMDDVLKDPKAIEEFNEAAMDAELLQLEEQLQERKPGWFVGFSNPSVYTYVLVAF ASMGGLLSGLDQSLISGANIYLPDALNLTDNQSSLVDAGMPLGAVAGALILSPANEYLGRRMAIIVSCILYTIGA ALEAGAISFGMIFAGRFVLGMGVGLEGGTVPVYVAESVPRKMRGNLVSLYQLNIALGEVLGYAVAAIFLDVKGNW RYILGSSLVFSTILLVGMLFLPESPRYLMHKGRAVEAYGVWKRIRGFNDYDAKDEFLGMRQAVDAEREEQAATKK YAWMDFITVPRARRAMVYANIMVFLGQFTGVNAIMYYMSTLMDAIGFDERDSVFMSLVGGGSLLIGTIPAVLYME RFGRRYWANAMLPGFFIGLVLVGIGYQINYQTHLKAAQGVYLTGIILYQAFFGSYACLTWVVPAEVFPTYLRSYG MTTADANLFLCSFIVTYNFTRMMKAMTRIGLTLGFYGGIAFIGWFYQIIFMPETKNKSLEEIDELFSRPTSAIVK ENLKSTGEVIDDLFHLRFKKVFSPPPKED* |
| Coding | >Ani_SJS100_1|g3488.t1 ATGGGTGTCGTACACGACCTGGACACCTCCCATGATGACCACAAGGAGGGAACCGCCTTGGAGATGGACGATGTC CTCAAGGACCCCAAGGCCATCGAGGAATTCAACGAAGCTGCCATGGATGCAGAGTTGTTGCAACTCGAAGAGCAG CTGCAGGAGAGGAAGCCCGGTTGGTTCGTGGGCTTCTCCAATCCATCTGTGTATACCTACGTCCTAGTGGCCTTT GCCTCCATGGGTGGTCTGCTCTCCGGTCTGGATCAGTCCCTCATCAGTGGTGCCAACATCTACCTGCCCGATGCA TTGAACCTTACCGACAACCAAAGTAGTCTTGTGGATGCTGGTATGCCTCTGGGTGCCGTGGCCGGTGCCCTGATC CTCTCCCCCGCCAACGAGTACCTCGGTCGTCGCATGGCCATCATCGTCTCCTGCATCCTGTATACTATCGGTGCC GCCTTGGAGGCCGGTGCCATCAGCTTCGGTATGATCTTTGCTGGACGTTTCGTGCTTGGTATGGGTGTGGGTCTG GAAGGTGGTACAGTCCCTGTGTATGTCGCCGAGTCTGTGCCCCGCAAGATGCGTGGTAACCTCGTCTCACTATAC CAGTTGAACATCGCTCTCGGTGAAGTCCTGGGCTATGCCGTGGCCGCCATCTTCCTCGATGTCAAGGGTAACTGG CGTTACATCCTGGGATCTTCCCTGGTGTTCTCGACCATTCTGCTAGTGGGTATGCTTTTCCTGCCGGAGAGTCCG CGTTACCTCATGCACAAGGGCCGGGCCGTGGAAGCCTACGGCGTATGGAAGCGAATCCGCGGCTTCAACGACTAT GACGCCAAGGACGAGTTCCTGGGCATGCGCCAGGCGGTGGATGCCGAGCGCGAAGAACAAGCCGCTACCAAGAAG TACGCCTGGATGGACTTCATCACAGTGCCGCGCGCCCGTCGCGCCATGGTCTACGCCAACATCATGGTCTTCCTG GGCCAATTCACCGGTGTCAACGCCATCATGTACTACATGAGCACACTGATGGATGCCATCGGCTTCGACGAGCGT GACAGCGTCTTCATGTCTTTGGTTGGTGGTGGCTCCCTCCTGATCGGCACCATCCCGGCGGTGCTGTACATGGAA CGGTTCGGCCGCCGCTACTGGGCCAATGCGATGCTCCCCGGGTTTTTCATCGGCTTAGTGCTGGTGGGCATCGGC TACCAGATCAACTACCAGACCCACCTCAAAGCCGCCCAGGGCGTCTACCTCACCGGCATCATCCTCTACCAGGCC TTCTTCGGCTCCTACGCGTGTCTCACCTGGGTCGTGCCCGCCGAAGTCTTCCCCACTTATTTGCGCAGTTACGGC ATGACCACCGCCGACGCCAACCTCTTCCTCTGCTCCTTCATCGTCACCTACAACTTCACCCGCATGATGAAGGCC ATGACCCGGATCGGTCTGACTCTGGGTTTCTATGGTGGAATTGCCTTCATTGGCTGGTTCTACCAGATCATTTTC ATGCCTGAGACCAAGAACAAGTCCCTCGAGGAAATCGATGAGCTTTTCTCCCGTCCCACTTCTGCTATTGTCAAG GAGAATCTGAAGAGTACGGGCGAGGTCATTGATGATTTGTTCCACTTGCGCTTCAAGAAGGTGTTTTCGCCGCCG CCGAAGGAGGACTGA |
| Transcript | >Ani_SJS100_1|g3488.t1 ATGGGTGTCGTACACGACCTGGACACCTCCCATGATGACCACAAGGAGGGAACCGCCTTGGAGATGGACGATGTC CTCAAGGACCCCAAGGCCATCGAGGAATTCAACGAAGCTGCCATGGATGCAGAGTTGTTGCAACTCGAAGAGCAG CTGCAGGAGAGGAAGCCCGGTTGGTTCGTGGGCTTCTCCAATCCATCTGTGTATACCTACGTCCTAGTGGCCTTT GCCTCCATGGGTGGTCTGCTCTCCGGTCTGGATCAGTCCCTCATCAGTGGTGCCAACATCTACCTGCCCGATGCA TTGAACCTTACCGACAACCAAAGTAGTCTTGTGGATGCTGGTATGCCTCTGGGTGCCGTGGCCGGTGCCCTGATC CTCTCCCCCGCCAACGAGTACCTCGGTCGTCGCATGGCCATCATCGTCTCCTGCATCCTGTATACTATCGGTGCC GCCTTGGAGGCCGGTGCCATCAGCTTCGGTATGATCTTTGCTGGACGTTTCGTGCTTGGTATGGGTGTGGGTCTG GAAGGTGGTACAGTCCCTGTGTATGTCGCCGAGTCTGTGCCCCGCAAGATGCGTGGTAACCTCGTCTCACTATAC CAGTTGAACATCGCTCTCGGTGAAGTCCTGGGCTATGCCGTGGCCGCCATCTTCCTCGATGTCAAGGGTAACTGG CGTTACATCCTGGGATCTTCCCTGGTGTTCTCGACCATTCTGCTAGTGGGTATGCTTTTCCTGCCGGAGAGTCCG CGTTACCTCATGCACAAGGGCCGGGCCGTGGAAGCCTACGGCGTATGGAAGCGAATCCGCGGCTTCAACGACTAT GACGCCAAGGACGAGTTCCTGGGCATGCGCCAGGCGGTGGATGCCGAGCGCGAAGAACAAGCCGCTACCAAGAAG TACGCCTGGATGGACTTCATCACAGTGCCGCGCGCCCGTCGCGCCATGGTCTACGCCAACATCATGGTCTTCCTG GGCCAATTCACCGGTGTCAACGCCATCATGTACTACATGAGCACACTGATGGATGCCATCGGCTTCGACGAGCGT GACAGCGTCTTCATGTCTTTGGTTGGTGGTGGCTCCCTCCTGATCGGCACCATCCCGGCGGTGCTGTACATGGAA CGGTTCGGCCGCCGCTACTGGGCCAATGCGATGCTCCCCGGGTTTTTCATCGGCTTAGTGCTGGTGGGCATCGGC TACCAGATCAACTACCAGACCCACCTCAAAGCCGCCCAGGGCGTCTACCTCACCGGCATCATCCTCTACCAGGCC TTCTTCGGCTCCTACGCGTGTCTCACCTGGGTCGTGCCCGCCGAAGTCTTCCCCACTTATTTGCGCAGTTACGGC ATGACCACCGCCGACGCCAACCTCTTCCTCTGCTCCTTCATCGTCACCTACAACTTCACCCGCATGATGAAGGCC ATGACCCGGATCGGTCTGACTCTGGGTTTCTATGGTGGAATTGCCTTCATTGGCTGGTTCTACCAGATCATTTTC ATGCCTGAGACCAAGAACAAGTCCCTCGAGGAAATCGATGAGCTTTTCTCCCGTCCCACTTCTGCTATTGTCAAG GAGAATCTGAAGAGTACGGGCGAGGTCATTGATGATTTGTTCCACTTGCGCTTCAAGAAGGTGTTTTCGCCGCCG CCGAAGGAGGACTGA |
| Gene | >Ani_SJS100_1|g3488.t1 ATGGGTGTCGTACACGACCTGGACACCTCCCATGATGACCACAAGGAGGGAACCGCCTTGGAGATGGACGATGTC CTCAAGGACCCCAAGGCCATCGAGGAATTCAACGAAGCTGCCATGGATGCAGAGTTGTTGCAACTCGAAGAGCAG CTGCAGGAGAGGAAGCCCGGTTGGTTCGTGGGCTTCTCCAATCCATCTGTGTATACCTACGTCCTAGTGGCCTTT GCCTCCATGGGTGGTCTGCTCTCCGGTCTGGATCAGTCCCTCATCAGTGGTGCCAACATCTACCTGCCCGATGCA TTGAACCTTACCGACAACCAAAGTAGTCTTGTGGATGCTGGTATGCCTCTGGGTGCCGTGGCCGGTGCCCTGATC CTCTCCCCCGCCAACGAGTACCTCGGTCGTCGCATGGCCATCATCGTCTCCTGCATCCTGTATACTATCGGTGCC GCCTTGGAGGCCGGTGCCATCAGCTTCGGTATGATCTTTGCTGGACGTTTCGTGCTTGGTATGGGTGTGGGTCTG GAAGGTGGTACAGTCCCTGTGTATGTCGCCGAGTCTGGTATGTACTTTTACCCCTTACTTCCTTTTACATCATCA TCAACGTCCAATGTATCGACTAACGTCACTTCAGTGCCCCGCAAGATGCGTGGTAACCTCGTCTCACTATACCAG TTGAACATCGCTCTCGGTGAAGTCCTGGGCTATGCCGTGGCCGCCATCTTCCTCGATGTCAAGGGTAACTGGCGT TACATCCTGGGATCTTCCCTGGTGTTCTCGACCATTCTGCTAGTGGGTATGCTTTTCCTGCCGGAGAGTCCGCGT TACCTCATGCACAAGGGCCGGGCCGTGGAAGCCTACGGCGTATGGAAGCGAATCCGCGGCTTCAACGACTATGAC GCCAAGGACGAGTTCCTGGGCATGCGCCAGGCGGTGGATGCCGAGCGCGAAGAACAAGCCGCTACCAAGAAGTAC GCCTGGATGGACTTCATCACAGTGCCGCGCGCCCGTCGCGCCATGGTCTACGCCAACATCATGGTCTTCCTGGGC CAATTCACCGGTGTCAACGCCATCATGTACTACATGAGCACACTGATGGATGCCATCGGCTTCGACGAGCGTGAC AGCGTCTTCATGTCTTTGGTTGGTGGTGGCTCCCTCCTGATCGGCACCATCCCGGCGGTGCTGTACATGGAACGG TTCGGCCGCCGCTACTGGGCCAATGCGATGCTCCCCGGGTTTTTCATCGGCTTAGTGCTGGTGGGCATCGGCTAC CAGATCAACTACCAGACCCACCTCAAAGCCGCCCAGGGCGTCTACCTCACCGGCATCATCCTCTACCAGGCCTTC TTCGGCTCCTACGCGTGTCTCACCTGGGTCGTGCCCGCCGAAGTCTTCCCCACTTATTTGCGCAGTTACGGCATG ACCACCGCCGACGCCAACCTCTTCCTCTGCTCCTTCATCGTCACCTACAACTTCACCCGCATGATGAAGGCCATG ACCCGGATCGGTCTGACTCTGGGTTTCTATGGTGGAATTGCCTTCATTGGCTGGTTCTACCAGATCATTTTCATG CCTGAGACCAAGAACAAGTCCCTCGAGGAAATCGATGAGCTTTTCTCCCGTCCCACTTCTGCTATTGTCAAGGAG AATCTGAAGAGTACGGGCGAGGTCATTGATGATTTGTTCCACTTGCGCTTCAAGAAGGTGTTTTCGCCGCCGCCG AAGGAGGACTGA |