Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g3484.t1
Gene name
Location	scaffold_016:61077..61941
Strand	+
Gene length (bp)	864
Transcript length (bp)	705
Coding sequence length (bp)	705
Protein length (aa)	235

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01569	PAP2	PAP2 superfamily	5.9E-12	83	172

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 38	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	24	46	22
2	87	109	22
3	124	143	19
4	156	178	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g3484.t1 MADIPLASLSLTHVHYDPNDPISFLSAWLALVPQALCVSYATLIWASREAEVVLMFAGQMGCEALNFVLKRIVKE ERPKQMLGKGYGMPSSHAQFMAYLAVYASLFLIYRHSPSLSQSGAALHFWTRVLISLVLCLGAGAVAVSRIYLNY HTPKQVLAGCGAGMICAFAWFFITGLLRSQGWIDWVLNLEVVQFFRVRDLVVNEDLAEAGWQRWEAKQKLKRKGA GGQASSKTE*
Coding	>Ani_SJS100_1\|g3484.t1 ATGGCTGATATACCATTGGCATCCTTGTCTTTGACTCATGTCCACTACGACCCCAATGATCCAATTTCCTTTCTT TCTGCCTGGCTTGCCTTAGTGCCACAAGCGCTATGCGTGAGCTATGCTACCCTGATCTGGGCTTCAAGAGAAGCT GAGGTAGTCTTGATGTTTGCGGGTCAGATGGGTTGCGAAGCACTGAATTTTGTGCTCAAGCGCATCGTCAAAGAG GAGAGGCCAAAACAAATGCTGGGTAAAGGCTATGGCATGCCATCTTCTCATGCCCAGTTCATGGCCTATCTCGCC GTCTATGCATCACTCTTCCTCATCTACCGACACAGCCCGAGCTTATCGCAATCAGGAGCAGCCCTTCACTTCTGG ACGCGAGTATTGATTTCCTTGGTGCTGTGTCTCGGTGCTGGTGCAGTAGCCGTTAGCCGCATTTACCTGAATTAC CACACCCCCAAGCAGGTCCTGGCCGGGTGTGGCGCAGGTATGATCTGTGCGTTCGCTTGGTTCTTCATCACCGGG CTACTCAGGTCGCAGGGATGGATTGATTGGGTTTTGAACCTGGAGGTTGTTCAATTCTTTCGTGTGAGAGATTTG GTTGTGAACGAAGATCTCGCCGAGGCCGGATGGCAACGCTGGGAGGCCAAGCAAAAACTGAAGCGGAAGGGGGCC GGAGGTCAGGCATCGTCGAAAACCGAATAG
Transcript	>Ani_SJS100_1\|g3484.t1 ATGGCTGATATACCATTGGCATCCTTGTCTTTGACTCATGTCCACTACGACCCCAATGATCCAATTTCCTTTCTT TCTGCCTGGCTTGCCTTAGTGCCACAAGCGCTATGCGTGAGCTATGCTACCCTGATCTGGGCTTCAAGAGAAGCT GAGGTAGTCTTGATGTTTGCGGGTCAGATGGGTTGCGAAGCACTGAATTTTGTGCTCAAGCGCATCGTCAAAGAG GAGAGGCCAAAACAAATGCTGGGTAAAGGCTATGGCATGCCATCTTCTCATGCCCAGTTCATGGCCTATCTCGCC GTCTATGCATCACTCTTCCTCATCTACCGACACAGCCCGAGCTTATCGCAATCAGGAGCAGCCCTTCACTTCTGG ACGCGAGTATTGATTTCCTTGGTGCTGTGTCTCGGTGCTGGTGCAGTAGCCGTTAGCCGCATTTACCTGAATTAC CACACCCCCAAGCAGGTCCTGGCCGGGTGTGGCGCAGGTATGATCTGTGCGTTCGCTTGGTTCTTCATCACCGGG CTACTCAGGTCGCAGGGATGGATTGATTGGGTTTTGAACCTGGAGGTTGTTCAATTCTTTCGTGTGAGAGATTTG GTTGTGAACGAAGATCTCGCCGAGGCCGGATGGCAACGCTGGGAGGCCAAGCAAAAACTGAAGCGGAAGGGGGCC GGAGGTCAGGCATCGTCGAAAACCGAATAG
Gene	>Ani_SJS100_1\|g3484.t1 ATGGCTGATATACCATTGGCATCCTTGTCTTTGACTCATGTCCACTACGTAAGTCTTTGCCAATGCTCCTGAATA GTCAAAGTAGCCCGGATCTCAACGCCGGACCGTCGCTGACCAAGACTATCAAACGGAAATAGGACCCCAATGATC CAATTTCCTTTCTTTCTGCCTGGCTTGCCTTAGTGCCACAAGCGCTATGCGTGAGCTATGCTACCCTGATCTGGG CTTCAAGAGAAGCTGAGGTAGTCTTGATGTTTGCGGGTCAGATGGGTTGCGAAGCACTGAATTTTGTGCTCAAGC GCATCGTCAAAGAGGAGAGGCCAAAACGTAGGTATTTCTTTGCAGATGTTTTGCTTTCCTTCGACATGAAATGGA TGGAGCTAACGACTCTCTAAAGAAATGCTGGGTAAAGGCTATGGCATGCCATCTTCTCATGCCCAGTTCATGGCC TATCTCGCCGTCTATGCATCACTCTTCCTCATCTACCGACACAGCCCGAGCTTATCGCAATCAGGAGCAGCCCTT CACTTCTGGACGCGAGTATTGATTTCCTTGGTGCTGTGTCTCGGTGCTGGTGCAGTAGCCGTTAGCCGCATTTAC CTGAATTACCACACCCCCAAGCAGGTCCTGGCCGGGTGTGGCGCAGGTATGATCTGTGCGTTCGCTTGGTTCTTC ATCACCGGGCTACTCAGGTCGCAGGGATGGATTGATTGGGTTTTGAACCTGGAGGTTGTTCAATTCTTTCGTGTG AGAGATTTGGTTGTGAACGAAGATCTCGCCGAGGCCGGATGGCAACGCTGGGAGGCCAAGCAAAAACTGAAGCGG AAGGGGGCCGGAGGTCAGGCATCGTCGAAAACCGAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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