Protein ID | Ani_SJS100_1|g3468.t1 |
Gene name | |
Location | scaffold_016:24250..25661 |
Strand | + |
Gene length (bp) | 1411 |
Transcript length (bp) | 1350 |
Coding sequence length (bp) | 1350 |
Protein length (aa) | 450 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07798 | CCDC90-like | Coiled-coil domain-containing protein 90-like | 1.3E-43 | 218 | 390 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 20 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 376 | 395 | 19 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g3468.t1 MAAPRLPFLYPNLMRAVRSCEPHTYRSLRLSSRNQYAPFHTSPRRSQETYHRRYGPAAEANLPPPSKPKDEPARQ QPTNSSSGKDKDSNAASSPNPTPPAQSQPKDTDTTSEASSQSQQDKFASADTELLDEEKSAQEQEPREDSEPILD ARDADEVNAISSERPPEESIHLHHPLNQNPLEGVLHMPSPSSYLTTTGGLASENNHPNLAPAPYVHHFDTYSLVR DLSTGGFSEEQSVTIMKAVRTILHSNLDLARQSLTSKSDVENESYLFKAACSELQSSLQTARNSEMQRQRTSRTQ LQHESDILSQRLNQELAGLKDDIKGMFNDHKMTTREQQRSIDTSVQELNYKITVSLNSDGKSEIEGLRWILTRRA AMAVATSAFMIICFLKYYSVRKAQESAEKKKKEQDLPVKGGTKEARAAAAVAGRDPLQPKSAPVPGVHLGESLG* |
Coding | >Ani_SJS100_1|g3468.t1 ATGGCGGCCCCAAGGCTTCCATTCCTTTACCCAAATCTGATGCGCGCAGTTCGATCCTGCGAACCCCATACCTAC CGTTCTCTTCGCCTTTCATCCCGCAACCAGTACGCTCCCTTCCACACCAGTCCACGACGAAGTCAGGAAACCTAT CATCGAAGATACGGGCCTGCCGCAGAAGCGAACCTACCACCGCCCTCCAAACCTAAAGATGAACCAGCTCGTCAA CAGCCCACCAACTCTTCATCCGGGAAAGACAAGGACAGCAATGCTGCTTCATCTCCGAACCCAACCCCACCAGCG CAATCGCAGCCAAAGGACACCGACACCACCTCCGAGGCCTCATCACAGTCGCAACAAGACAAGTTTGCCTCTGCA GACACAGAACTGCTAGACGAGGAGAAATCCGCACAAGAACAAGAGCCCCGTGAAGACTCCGAGCCCATCCTCGAC GCCCGTGATGCCGATGAGGTCAATGCTATATCAAGCGAAAGACCCCCCGAGGAATCCATCCATCTTCACCATCCA CTCAACCAGAACCCTCTCGAGGGTGTACTTCACATGCCATCTCCTTCATCCTACCTGACTACAACCGGCGGTCTC GCCTCCGAAAATAACCACCCGAACCTCGCCCCAGCCCCTTACGTTCACCACTTTGATACATACTCGCTCGTTCGC GACCTCTCCACAGGTGGCTTCTCCGAAGAACAATCCGTCACAATCATGAAGGCAGTCCGGACCATCCTACACAGT AACCTTGATCTTGCACGCCAAAGCCTGACCTCCAAATCGGACGTTGAGAACGAGTCCTACCTGTTCAAAGCAGCT TGCTCGGAACTCCAATCCTCTTTACAGACGGCCAGAAACTCCGAAATGCAGCGTCAGCGGACGTCCCGAACACAG CTACAGCACGAGTCTGACATTCTATCTCAACGCTTGAACCAGGAACTGGCCGGTCTGAAAGACGACATCAAGGGA ATGTTCAACGATCACAAGATGACGACCCGCGAACAACAGCGAAGCATCGACACCTCTGTACAGGAACTAAATTAC AAAATCACTGTCTCTCTGAACAGTGACGGCAAGAGTGAAATTGAGGGTCTGCGCTGGATTCTAACCAGGAGAGCT GCTATGGCCGTTGCTACTAGTGCCTTCATGATCATCTGCTTCCTGAAATACTACTCCGTCCGCAAGGCGCAGGAG AGCGCGGAGAAGAAAAAGAAAGAGCAAGATCTCCCAGTCAAGGGCGGAACTAAAGAGGCCCGAGCAGCAGCTGCC GTCGCCGGCCGGGATCCTCTCCAGCCCAAGTCGGCGCCAGTTCCGGGGGTTCATCTTGGAGAGTCCCTTGGCTGA |
Transcript | >Ani_SJS100_1|g3468.t1 ATGGCGGCCCCAAGGCTTCCATTCCTTTACCCAAATCTGATGCGCGCAGTTCGATCCTGCGAACCCCATACCTAC CGTTCTCTTCGCCTTTCATCCCGCAACCAGTACGCTCCCTTCCACACCAGTCCACGACGAAGTCAGGAAACCTAT CATCGAAGATACGGGCCTGCCGCAGAAGCGAACCTACCACCGCCCTCCAAACCTAAAGATGAACCAGCTCGTCAA CAGCCCACCAACTCTTCATCCGGGAAAGACAAGGACAGCAATGCTGCTTCATCTCCGAACCCAACCCCACCAGCG CAATCGCAGCCAAAGGACACCGACACCACCTCCGAGGCCTCATCACAGTCGCAACAAGACAAGTTTGCCTCTGCA GACACAGAACTGCTAGACGAGGAGAAATCCGCACAAGAACAAGAGCCCCGTGAAGACTCCGAGCCCATCCTCGAC GCCCGTGATGCCGATGAGGTCAATGCTATATCAAGCGAAAGACCCCCCGAGGAATCCATCCATCTTCACCATCCA CTCAACCAGAACCCTCTCGAGGGTGTACTTCACATGCCATCTCCTTCATCCTACCTGACTACAACCGGCGGTCTC GCCTCCGAAAATAACCACCCGAACCTCGCCCCAGCCCCTTACGTTCACCACTTTGATACATACTCGCTCGTTCGC GACCTCTCCACAGGTGGCTTCTCCGAAGAACAATCCGTCACAATCATGAAGGCAGTCCGGACCATCCTACACAGT AACCTTGATCTTGCACGCCAAAGCCTGACCTCCAAATCGGACGTTGAGAACGAGTCCTACCTGTTCAAAGCAGCT TGCTCGGAACTCCAATCCTCTTTACAGACGGCCAGAAACTCCGAAATGCAGCGTCAGCGGACGTCCCGAACACAG CTACAGCACGAGTCTGACATTCTATCTCAACGCTTGAACCAGGAACTGGCCGGTCTGAAAGACGACATCAAGGGA ATGTTCAACGATCACAAGATGACGACCCGCGAACAACAGCGAAGCATCGACACCTCTGTACAGGAACTAAATTAC AAAATCACTGTCTCTCTGAACAGTGACGGCAAGAGTGAAATTGAGGGTCTGCGCTGGATTCTAACCAGGAGAGCT GCTATGGCCGTTGCTACTAGTGCCTTCATGATCATCTGCTTCCTGAAATACTACTCCGTCCGCAAGGCGCAGGAG AGCGCGGAGAAGAAAAAGAAAGAGCAAGATCTCCCAGTCAAGGGCGGAACTAAAGAGGCCCGAGCAGCAGCTGCC GTCGCCGGCCGGGATCCTCTCCAGCCCAAGTCGGCGCCAGTTCCGGGGGTTCATCTTGGAGAGTCCCTTGGCTGA |
Gene | >Ani_SJS100_1|g3468.t1 ATGGCGGCCCCAAGGCTTCCATTCCTTTACCCAAATCTGATGCGCGCAGTTCGATCCTGCGAACCCCATACCTAC CGTTCTCTTCGCCTTTCATCCCGCAACCAGTACGCTCCCTTCCACACCAGTCCACGACGAAGTCAGGAAACCTAT CATCGAAGATACGGGCCTGCCGCAGAAGCGAACCTACCACCGCCCTCCAAACCTAAAGATGAACCAGCTCGTCAA CAGCCCACCAACTCTTCATCCGGGAAAGACAAGGACAGCAATGCTGCTTCATCTCCGAACCCAACCCCACCAGCG CAATCGCAGCCAAAGGACACCGACACCACCTCCGAGGCCTCATCACAGTCGCAACAAGACAAGTTTGCCTCTGCA GACACAGAACTGCTAGACGAGGAGAAATCCGCACAAGAACAAGAGCCCCGTGAAGACTCCGAGCCCATCCTCGAC GCCCGTGATGCCGATGAGGTCAATGCTATATCAAGCGAAAGACCCCCCGAGGAATCCATCCATCTTCACCATCCA CTCAACCAGAACCCTCTCGAGGGTGTACTTCACATGCCATCTCCTTCATCCTACCTGACTACAACCGGCGGTCTC GCCTCCGAAAATAACCACCCGAACCTCGCCCCAGCCCCTTACGTTCACCACTTTGATACATACTCGCTCGTTCGC GACCTCTCCACAGGTGGCTTCTCCGAAGAACAATCCGTCACAATCATGAAGGCAGTCCGGACCATCCTACACAGT AACCTTGATCTTGCACGCCAAAGCCTGACCTCCAAATCGGACGTTGAGAACGAGTCCTACCTGTTCAAAGCAGCT TGCTCGGAACTCCAATCCTCTTTACAGACGGCCAGAAACTCCGAAATGCAGCGTCAGCGGACGTCCCGAACACAG CTACAGCACGAGTCTGACATTCTATCTCAACGCTTGAACCAGGAACTGGCCGGTCTGAAAGACGACATCAAGGGA ATGTTCAACGATCACAAGATGACGACCCGCGAACAACAGCGAAGCATCGACACCTCTGTACAGGAACTAAATTAC AAAATCACTGTCTCTCTGAACAGTGACGGCAAGAGTGAAATTGAGGGTCTGCGCTGGATTCTAACCAGGAGAGCT GCTATGGCCGTTGCTACTAGTGCCTGTAAGTCACATTCTATACCTTCCTTACACTCCGTCTCAAGTTTAGTACTA ATATCGTACAGTCATGATCATCTGCTTCCTGAAATACTACTCCGTCCGCAAGGCGCAGGAGAGCGCGGAGAAGAA AAAGAAAGAGCAAGATCTCCCAGTCAAGGGCGGAACTAAAGAGGCCCGAGCAGCAGCTGCCGTCGCCGGCCGGGA TCCTCTCCAGCCCAAGTCGGCGCCAGTTCCGGGGGTTCATCTTGGAGAGTCCCTTGGCTGA |