Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g3408.t1
Gene name
Locationscaffold_015:370606..372131
Strand-
Gene length (bp)1525
Transcript length (bp)1101
Coding sequence length (bp)1101
Protein length (aa) 367

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 24 0.5

Transmembrane Domains

Domain # Start End Length
1 37 59 22
2 179 201 22
3 216 238 22
4 273 295 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g3408.t1
MGNFDHNAVIRGAQLTVVATVRALRNPDLFKYDHFRQAAFAVAVGVGVELLIQIPIIALKIGLWFISWIVDLESV
TWDDSLIEGLDFLSKSVLHVPFLIMSLMRYITPTLDEIFMESLKWVDTTYVDKHKAEDPSTLRAMYYPNLSMYNA
GDGKVKSTAPKKSAKERIVVFLRRSGQRAALLLGVSILSLVPVVGRFATPAASFFAFKDAVGTTPAAVISGAGLI
FPKSYVVSFLHSFYASRTLMREMLDPYFSRVPFTPEQRNRWFADRQGVLFGFAFAFTVVLKTPFIGVLLYGIAQA
ATAYLVTKVTDPPPPPSEKEGFAETQVTWNNKHEFLRLSLDNIDQLNKAPEEEKPKAPEVPGRKFE*
Coding >Ani_SJS100_1|g3408.t1
ATGGGCAATTTCGATCATAACGCCGTGATTCGCGGCGCTCAACTGACGGTGGTTGCAACCGTTCGCGCATTGCGG
AACCCTGACCTGTTCAAGTACGACCACTTTCGACAGGCTGCCTTTGCTGTCGCGGTCGGTGTGGGTGTCGAGCTC
CTCATCCAGATCCCCATCATCGCACTCAAGATTGGGCTTTGGTTCATCTCATGGATTGTCGACCTCGAGAGTGTA
ACTTGGGACGACTCCCTCATTGAGGGTCTCGACTTCCTCTCCAAGTCTGTCCTCCATGTCCCCTTCCTCATCATG
TCGTTGATGCGGTACATCACTCCGACATTGGATGAAATCTTCATGGAATCGTTGAAATGGGTGGACACGACCTAT
GTCGATAAGCACAAGGCAGAGGACCCGAGCACTCTGCGTGCCATGTACTACCCGAACCTTTCTATGTACAACGCC
GGTGATGGCAAGGTCAAGTCCACTGCGCCGAAGAAGTCAGCCAAAGAAAGAATCGTGGTGTTCCTTAGGAGGTCC
GGCCAACGAGCCGCTCTGCTCCTGGGCGTGTCCATTTTGTCTCTTGTGCCTGTTGTCGGACGCTTTGCCACTCCA
GCAGCTTCCTTCTTTGCCTTTAAGGATGCTGTGGGAACTACCCCTGCGGCGGTCATCTCCGGAGCTGGCTTGATC
TTCCCGAAGAGCTACGTTGTTTCCTTCCTGCACAGCTTCTACGCCTCTCGTACCCTGATGCGTGAGATGCTCGAC
CCCTACTTTAGCCGCGTTCCCTTCACCCCCGAGCAAAGAAACCGCTGGTTCGCCGACCGTCAGGGCGTCCTCTTC
GGTTTCGCCTTTGCATTTACAGTTGTGCTGAAGACTCCCTTCATCGGAGTTCTCCTGTACGGCATTGCGCAAGCC
GCCACGGCGTATCTCGTCACCAAGGTCACGGACCCCCCGCCGCCCCCCTCGGAGAAAGAGGGCTTCGCAGAGACC
CAGGTGACTTGGAATAACAAACACGAGTTCCTGCGCCTGTCGCTGGACAACATTGACCAGCTGAACAAGGCTCCA
GAGGAGGAAAAGCCCAAGGCGCCTGAGGTGCCGGGCCGGAAATTCGAGTAA
Transcript >Ani_SJS100_1|g3408.t1
ATGGGCAATTTCGATCATAACGCCGTGATTCGCGGCGCTCAACTGACGGTGGTTGCAACCGTTCGCGCATTGCGG
AACCCTGACCTGTTCAAGTACGACCACTTTCGACAGGCTGCCTTTGCTGTCGCGGTCGGTGTGGGTGTCGAGCTC
CTCATCCAGATCCCCATCATCGCACTCAAGATTGGGCTTTGGTTCATCTCATGGATTGTCGACCTCGAGAGTGTA
ACTTGGGACGACTCCCTCATTGAGGGTCTCGACTTCCTCTCCAAGTCTGTCCTCCATGTCCCCTTCCTCATCATG
TCGTTGATGCGGTACATCACTCCGACATTGGATGAAATCTTCATGGAATCGTTGAAATGGGTGGACACGACCTAT
GTCGATAAGCACAAGGCAGAGGACCCGAGCACTCTGCGTGCCATGTACTACCCGAACCTTTCTATGTACAACGCC
GGTGATGGCAAGGTCAAGTCCACTGCGCCGAAGAAGTCAGCCAAAGAAAGAATCGTGGTGTTCCTTAGGAGGTCC
GGCCAACGAGCCGCTCTGCTCCTGGGCGTGTCCATTTTGTCTCTTGTGCCTGTTGTCGGACGCTTTGCCACTCCA
GCAGCTTCCTTCTTTGCCTTTAAGGATGCTGTGGGAACTACCCCTGCGGCGGTCATCTCCGGAGCTGGCTTGATC
TTCCCGAAGAGCTACGTTGTTTCCTTCCTGCACAGCTTCTACGCCTCTCGTACCCTGATGCGTGAGATGCTCGAC
CCCTACTTTAGCCGCGTTCCCTTCACCCCCGAGCAAAGAAACCGCTGGTTCGCCGACCGTCAGGGCGTCCTCTTC
GGTTTCGCCTTTGCATTTACAGTTGTGCTGAAGACTCCCTTCATCGGAGTTCTCCTGTACGGCATTGCGCAAGCC
GCCACGGCGTATCTCGTCACCAAGGTCACGGACCCCCCGCCGCCCCCCTCGGAGAAAGAGGGCTTCGCAGAGACC
CAGGTGACTTGGAATAACAAACACGAGTTCCTGCGCCTGTCGCTGGACAACATTGACCAGCTGAACAAGGCTCCA
GAGGAGGAAAAGCCCAAGGCGCCTGAGGTGCCGGGCCGGAAATTCGAGTAA
Gene >Ani_SJS100_1|g3408.t1
ATGGGCAATTTCGATCATAACGCCGTGATTCGCGGCGCTCAACTGACGGTGGTTGCAAGTAAGTCCGGCCCCTTT
TGCCTGCTTGAGTCCTGGGGCTTCTAGTAGCCAATGGCTGTGCGACTTCTTTCGCCTTGCGTAAAAGGGGGAGCG
GCAGATGTTGGAATTATAGGGGTCTGCGTGGTGCTGAATGTCAATGGCTCAGCACGGCCGAGTTCCCTAGTAGTT
CCATGATCGACAGCCATGGCTGGCTAGCTACCCGCTTGGTTCTTTGGGGAAACACGGCACGAGTCCTACTTTACC
CGCAGCTAACGTAGCTGAACAGCCGTTCGCGCATTGCGGAACCCTGACCTGTTCAAGTACGACCACTTTCGACAG
GCTGCCTTTGCTGTCGCGGTCGGTGTGGGTGTCGAGCTCCTCATCCAGATCCCCGTATGTGACTACCTTCTAGCT
ACGCGCTTGCACAACAACGAAACTGACAAGGTGTGCTATAGATCATCGCACTCAAGATTGGGCTTTGGTTCATCT
CATGGATTGTCGACCTCGAGAGTGTAACTTGGGACGACTCCCTCATTGAGGGTCTCGACTTCCTCTCCAAGTCTG
TCCTCCATGTCCCCTTCCTCATCATGTCGTTGATGCGGTACATCACTCCGACATTGGATGAAATGTAGGCCAACC
ATTCTTCTACATAGTGTGCACGTGCTGATTGGTTAGCTTCATGGAATCGTTGAAATGGGTGGACACGACCTATGT
CGATAAGCACAAGGCAGAGGACCCGAGCACTCTGCGTGCCATGTACTACCCGAACCTTTCTATGTACAACGCCGG
TGATGGCAAGGTCAAGTCCACTGCGCCGAAGAAGTCAGCCAAAGAAAGAATCGTGGTGTTCCTTAGGAGGTCCGG
CCAACGAGCCGCTCTGCTCCTGGGCGTGTCCATTTTGTCTCTTGTGCCTGTTGTCGGACGCTTTGCCACTCCAGC
AGCTTCCTTCTTTGCCTTTAAGGATGCTGTGGGAACTACCCCTGCGGCGGTCATCTCCGGAGCTGGCTTGATCTT
CCCGAAGAGCTACGTTGTTTCCTTCCTGCACAGCTTCTACGCCTCTCGTACCCTGATGCGTGAGATGGTAAGTCA
CTCTAGCCACATTATCGATGGAACAATCCTAACGGACAACCAGCTCGACCCCTACTTTAGCCGCGTTCCCTTCAC
CCCCGAGCAAAGAAACCGCTGGTTCGCCGACCGTCAGGGCGTCCTCTTCGGTTTCGCCTTTGCATTTACAGTTGT
GCTGAAGACTCCCTTCATCGGAGTTCTCCTGTACGGCATTGCGCAAGCCGCCACGGCGTATCTCGTCACCAAGGT
CACGGACCCCCCGCCGCCCCCCTCGGAGAAAGAGGGCTTCGCAGAGACCCAGGTGACTTGGAATAACAAACACGA
GTTCCTGCGCCTGTCGCTGGACAACATTGACCAGCTGAACAAGGCTCCAGAGGAGGAAAAGCCCAAGGCGCCTGA
GGTGCCGGGCCGGAAATTCGAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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