© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g3404.t1 |
| Gene name | |
| Location | scaffold_015:361449..363406 |
| Strand | + |
| Gene length (bp) | 1957 |
| Transcript length (bp) | 1641 |
| Coding sequence length (bp) | 1641 |
| Protein length (aa) | 547 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 3.9E-33 | 65 | 461 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 9.8E-06 | 115 | 250 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 58 | 80 | 22 |
| 2 | 95 | 117 | 22 |
| 3 | 124 | 146 | 22 |
| 4 | 150 | 172 | 22 |
| 5 | 184 | 206 | 22 |
| 6 | 211 | 233 | 22 |
| 7 | 324 | 346 | 22 |
| 8 | 366 | 388 | 22 |
| 9 | 409 | 431 | 22 |
| 10 | 435 | 457 | 22 |
| 11 | 470 | 492 | 22 |
| 12 | 502 | 524 | 22 |
| Orthofinder run ID | 3 |
| Orthogroup | 3687 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g3404.t1 MARSDAIDTDVPGTVYLVDATGSLRDVAHARTQDVLLIPQPTSFSADPLNWPLYKKYWTLFLISMYACVNSFGEN NWGAAWTTISDDTGVSLNNMNGGSALNYLMLGFFNIIWIPTAMRFGRKIVYILSLLFVLGSGIWGGFYQGVSQYY IMMVVNGIGTAAYQALIQLTIFDVFFTHERGRMLSIYIFFQQLGSIIGLICGGYISDGIGWRWSMPIVSIACAVL ILLFIFTFDDTMFPRYRFSGETPQRTTKAENETARTPSDTPTTEGKDSKVEPPMSIVESRTVGEMDMPPRTYLQK MSPVHYFKDDNTTWYQYFRRPFFLFAFPNILLAGIQFAFGCTAGIVSFNTISEIMTEAPYNWSAGSAGLIFLAAL VGNFLGMGIGSLSDWVVVFLARRNKGYKEPEMRLWTYSIPLVLAAVGYFVYGWGATEGLHWMSIAVGLCCMIAQQ VSATSIATAYAMECFEQISGELVIVLACCSSIINFVISFTVQDFIDGTNYGWTFTFYGIMVVLSMAAGAPMIIWG KDWRRKCKPRYEKFLAETGRQ* |
| Coding | >Ani_SJS100_1|g3404.t1 ATGGCTCGCTCTGATGCTATAGATACAGATGTTCCAGGAACGGTGTACCTGGTTGATGCAACGGGGAGTTTGAGA GATGTAGCTCATGCTAGGACACAAGATGTCCTTCTTATCCCTCAGCCTACATCCTTTTCAGCTGATCCTCTGAAT TGGCCTCTTTACAAGAAATACTGGACCCTCTTCCTGATCTCCATGTATGCATGCGTTAACTCCTTTGGGGAGAAC AACTGGGGTGCAGCATGGACAACTATATCTGATGATACTGGTGTGAGCCTGAACAATATGAACGGTGGCTCCGCT CTAAATTATCTTATGTTGGGTTTCTTCAACATTATCTGGATCCCCACGGCCATGAGATTTGGACGCAAAATTGTC TACATACTTAGTCTGCTGTTCGTCCTTGGAAGTGGTATCTGGGGTGGCTTCTATCAGGGTGTTTCGCAATACTAC ATTATGATGGTGGTCAACGGGATCGGAACTGCGGCCTATCAAGCTCTGATCCAGCTGACTATTTTCGACGTGTTT TTCACTCATGAGCGTGGCCGAATGCTGTCCATCTATATTTTCTTTCAACAGCTTGGATCTATTATCGGGCTGATC TGTGGCGGTTACATTTCTGACGGCATTGGCTGGAGATGGAGTATGCCCATCGTGTCTATAGCATGCGCTGTCTTG ATTCTTCTCTTCATCTTTACTTTTGATGACACGATGTTCCCGAGGTATCGCTTTTCGGGTGAGACACCTCAGCGA ACCACCAAGGCCGAAAACGAGACAGCTCGCACCCCATCTGACACCCCAACCACGGAGGGAAAAGATTCCAAGGTT GAACCGCCGATGTCCATCGTGGAAAGTCGCACTGTCGGGGAGATGGACATGCCTCCGCGAACCTACCTCCAAAAG ATGTCTCCGGTTCACTACTTCAAAGACGACAACACAACTTGGTACCAGTACTTTCGCCGTCCCTTCTTTCTTTTC GCGTTTCCCAATATTCTTCTAGCCGGTATTCAATTTGCATTTGGCTGCACTGCAGGTATTGTCTCGTTTAATACC ATCTCTGAGATCATGACGGAGGCACCATATAACTGGAGTGCCGGTTCTGCTGGCCTAATCTTCTTGGCAGCACTG GTTGGTAACTTTCTTGGCATGGGTATTGGATCACTGTCCGATTGGGTTGTCGTCTTTTTGGCACGTCGGAACAAG GGTTATAAGGAACCCGAGATGCGTTTATGGACGTATTCTATCCCCCTTGTACTTGCTGCGGTTGGCTATTTCGTC TACGGCTGGGGTGCTACCGAGGGGCTTCACTGGATGTCCATTGCAGTTGGCCTGTGCTGCATGATTGCTCAGCAG GTATCCGCCACCAGTATCGCAACCGCATACGCAATGGAGTGCTTCGAACAGATCTCTGGTGAGCTCGTCATTGTA CTGGCATGCTGCTCATCGATAATCAACTTTGTCATCTCCTTTACGGTGCAGGATTTCATCGACGGCACCAACTAC GGCTGGACCTTTACCTTCTATGGTATCATGGTTGTCCTTTCGATGGCTGCGGGTGCTCCGATGATTATCTGGGGT AAGGATTGGCGGCGGAAATGTAAGCCTCGGTATGAGAAGTTTTTGGCCGAAACAGGACGTCAGTGA |
| Transcript | >Ani_SJS100_1|g3404.t1 ATGGCTCGCTCTGATGCTATAGATACAGATGTTCCAGGAACGGTGTACCTGGTTGATGCAACGGGGAGTTTGAGA GATGTAGCTCATGCTAGGACACAAGATGTCCTTCTTATCCCTCAGCCTACATCCTTTTCAGCTGATCCTCTGAAT TGGCCTCTTTACAAGAAATACTGGACCCTCTTCCTGATCTCCATGTATGCATGCGTTAACTCCTTTGGGGAGAAC AACTGGGGTGCAGCATGGACAACTATATCTGATGATACTGGTGTGAGCCTGAACAATATGAACGGTGGCTCCGCT CTAAATTATCTTATGTTGGGTTTCTTCAACATTATCTGGATCCCCACGGCCATGAGATTTGGACGCAAAATTGTC TACATACTTAGTCTGCTGTTCGTCCTTGGAAGTGGTATCTGGGGTGGCTTCTATCAGGGTGTTTCGCAATACTAC ATTATGATGGTGGTCAACGGGATCGGAACTGCGGCCTATCAAGCTCTGATCCAGCTGACTATTTTCGACGTGTTT TTCACTCATGAGCGTGGCCGAATGCTGTCCATCTATATTTTCTTTCAACAGCTTGGATCTATTATCGGGCTGATC TGTGGCGGTTACATTTCTGACGGCATTGGCTGGAGATGGAGTATGCCCATCGTGTCTATAGCATGCGCTGTCTTG ATTCTTCTCTTCATCTTTACTTTTGATGACACGATGTTCCCGAGGTATCGCTTTTCGGGTGAGACACCTCAGCGA ACCACCAAGGCCGAAAACGAGACAGCTCGCACCCCATCTGACACCCCAACCACGGAGGGAAAAGATTCCAAGGTT GAACCGCCGATGTCCATCGTGGAAAGTCGCACTGTCGGGGAGATGGACATGCCTCCGCGAACCTACCTCCAAAAG ATGTCTCCGGTTCACTACTTCAAAGACGACAACACAACTTGGTACCAGTACTTTCGCCGTCCCTTCTTTCTTTTC GCGTTTCCCAATATTCTTCTAGCCGGTATTCAATTTGCATTTGGCTGCACTGCAGGTATTGTCTCGTTTAATACC ATCTCTGAGATCATGACGGAGGCACCATATAACTGGAGTGCCGGTTCTGCTGGCCTAATCTTCTTGGCAGCACTG GTTGGTAACTTTCTTGGCATGGGTATTGGATCACTGTCCGATTGGGTTGTCGTCTTTTTGGCACGTCGGAACAAG GGTTATAAGGAACCCGAGATGCGTTTATGGACGTATTCTATCCCCCTTGTACTTGCTGCGGTTGGCTATTTCGTC TACGGCTGGGGTGCTACCGAGGGGCTTCACTGGATGTCCATTGCAGTTGGCCTGTGCTGCATGATTGCTCAGCAG GTATCCGCCACCAGTATCGCAACCGCATACGCAATGGAGTGCTTCGAACAGATCTCTGGTGAGCTCGTCATTGTA CTGGCATGCTGCTCATCGATAATCAACTTTGTCATCTCCTTTACGGTGCAGGATTTCATCGACGGCACCAACTAC GGCTGGACCTTTACCTTCTATGGTATCATGGTTGTCCTTTCGATGGCTGCGGGTGCTCCGATGATTATCTGGGGT AAGGATTGGCGGCGGAAATGTAAGCCTCGGTATGAGAAGTTTTTGGCCGAAACAGGACGTCAGTGA |
| Gene | >Ani_SJS100_1|g3404.t1 ATGGCTCGCTCTGATGCTATAGATACAGATGTTCCAGGAACGGTGTACCTGGTTGATGGTAGGCTCTTTCTATAA GCTGCATTTAATCGCTACTGACGTCGAACTCAGCAACGGGGAGTTTGAGAGATGTAGCTCATGCTAGGACACAAG ATGTCCTTCTTATCCCTCAGCCTACATCCTTTTCAGCTGATCCTCTGGTGGGTAGCAGATGAAGGGAACCTATGC CACTTAGCTCGTGCTAACCCAATTTAGAATTGGCCTCTTTACAAGAAATACTGGACCCTCTTCCTGATCTCCATG TATGCATGCGTTAACTCCTTTGGGGAGAACAACTGGGGTGCAGCATGGACAACTATATCTGATGATACTGGTGTG AGCCTGAACAATATGAACGGTGGCTCCGCTCTAAATTATCTTATGTTGGGTTTCTTCAACATTATCTGGATCCCC ACGGCCATGAGATTTGGACGCAAAATTGTCTACATACTTAGTCTGCTGTTCGTCCTTGGAAGTGGTATCTGGGGT GGCTTCTATCAGGGTGTTTCGCAATACTACATTATGATGGTGGTCAACGGGATCGGAACTGCGGCCTATCAAGCT CTGATCCAGCTGACTGTATGCTACGTTTCTGAAATGCTCACTTCGGTATGCTAACACATCTTAGATTTTCGACGT GTTTTTCACTCATGAGCGTGGCCGAATGCTGTCCATCTATATTTTCTTTCAACAGCTTGGATCTATTATCGGGCT GATCTGTGGCGGTTACATTTCTGACGGCATTGGCTGGAGATGGAGTATGCCCATCGTGTCTATAGCATGCGTCAG TGTCCTTGTACCCAGATTAGTCTGCTATAGTCAGACAGCTAACTTTTAACAGGCTGTCTTGATTCTTCTCTTCAT CTTTACTTTTGATGACACGATGTTCCCGAGGTATCGCTTTTCGGGTGAGACACCTCAGCGAACCACCAAGGCCGA AAACGAGACAGCTCGCACCCCATCTGACACCCCAACCACGGAGGGAAAAGATTCCAAGGTTGAACCGCCGATGTC CATCGTGGAAAGTCGCACTGTCGGGGAGATGGACATGCCTCCGCGAACCTACCTCCAAAAGATGTCTCCGGTTCA CTACTTCAAAGACGACAACACAACTTGGTACCAGTACTTTCGCCGTCCCTTCTTTCTTTTCGCGTTTCCCAATAT TCTTCTAGCCGGTATTCAATTTGCATTTGGCTGCACTGCAGGTATTGTCTCGTTTAATACCATCTCTGAGATCAT GACGGAGGCACCATATAACTGGAGTGCCGGTTCTGCTGGCCTAATCTTCTTGGCAGCACTGGTTGGTAACTTTCT TGGGTATGATGTATCCTATCACTAGTTTCATGAAAAATGCTAATCTTGTGACAGCATGGGTATTGGATCACTGTC CGATTGGGTTGTCGTCTTTTTGGCACGTCGGAACAAGGGTTATAAGGAACCCGAGATGCGTTTATGGACGTATTC TATCCCCCTTGTACTTGCTGCGGTTGGCTATTTCGTCTACGGCTGGGGTGCTACCGAGGGGCTTCACTGGATGTC CATTGCAGTTGGCCTGTGCTGCATGATTGCTCAGCAGGTATCCGCCACCAGTATCGCAACCGCATACGCAATGGA GTGCTTCGAACAGGTAAGCCTTTTACATCCACAATCTTGTACTAGGTGGCTAATGCTCTCCGTCCAGATCTCTGG TGAGCTCGTCATTGTACTGGCATGCTGCTCATCGATAATCAACTTTGTCATCTCCTTTACGGTGCAGGATTTCAT CGACGGCACCAACTACGGCTGGACCTTTACCTTCTATGGTATCATGGTTGTCCTTTCGATGGCTGCGGGTGCTCC GATGATTATCTGGGGTAAGGATTGGCGGCGGAAATGTAAGCCTCGGTATGAGAAGTTTTTGGCCGAAACAGGACG TCAGTGA |