Protein ID | Ani_SJS100_1|g3381.t1 |
Gene name | |
Location | scaffold_015:284963..287660 |
Strand | - |
Gene length (bp) | 2697 |
Transcript length (bp) | 2640 |
Coding sequence length (bp) | 2640 |
Protein length (aa) | 880 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13639 | zf-RING_2 | Ring finger domain | 2.4E-12 | 732 | 776 |
PF17123 | zf-RING_11 | RING-like zinc finger | 2.3E-09 | 732 | 761 |
PF12678 | zf-rbx1 | RING-H2 zinc finger domain | 1.9E-08 | 734 | 776 |
PF13923 | zf-C3HC4_2 | Zinc finger, C3HC4 type (RING finger) | 1.2E-08 | 732 | 775 |
PF00097 | zf-C3HC4 | Zinc finger, C3HC4 type (RING finger) | 2.5E-08 | 733 | 775 |
PF02225 | PA | PA domain | 2.4E-07 | 216 | 291 |
PF14634 | zf-RING_5 | zinc-RING finger domain | 3.8E-07 | 732 | 776 |
PF13445 | zf-RING_UBOX | RING-type zinc-finger | 5.3E-05 | 733 | 773 |
GO Term | Description | Terminal node |
---|---|---|
GO:0046872 | metal ion binding | Yes |
GO:0008270 | zinc ion binding | Yes |
GO:0043169 | cation binding | No |
GO:0005488 | binding | No |
GO:0043167 | ion binding | No |
GO:0046914 | transition metal ion binding | No |
GO:0003674 | molecular_function | No |
Domain # | Start | End | Length |
---|---|---|---|
1 | 7 | 29 | 22 |
2 | 605 | 627 | 22 |
Orthofinder run ID | 3 |
Orthogroup | 3661 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g3381.t1 MRPPRLILVVFCLIFLPIILTFFSALTSSPRVSTPDSLAGRATGLHALFSFNIPSSLFPPSAIISLTDDNSTFFL ARPAAFGPLLPDKGLSGQLWIGSGFGERTTAGAEGELGCSDIPGWGEGDGPKAGGGADSTTGKSGSTPGNEPTVP QSHRQAIPQPDIDLQHDSGTRAPSPLTNDGTDDHLHHPLPESQVPDSGAMEKHGEFYSNRQAAHADIQSLQESAE INGKVVLLSRGGCGFLEKVKWVQRRGGIALIVGDDTRGGSLVTMYARGDTSNVTIPALFTSHTTAHLLSSLVPPQ GEDSGADDGSGTHTKISTHGSAGKQRMDATATTSATASPTSSHKAVVHDSAMPPKQKPGLFHALLSLFGLSNHGG PVWYPPEDSRRPPSSGNINWILLDRWDEQEPSQDDTERKTSRTKTDGVSEDLKKSGTSSSSTDGDGFVIGVQDWR DPDLVVPKGSALPSPTSTTDAAGNRVHTGVKGSHPTPATLKGGSITPGSGEYRTVEKSSVEKESKVEDSSHKSVY DDVKPGSSSQRNGWFARHFFWATDKPGPSPSSSAHGQITSVDQKLHDATAQNGQGVNAAEHDGLWVTLTPTSMST SPFFDTLLVLVVSPLLTLTVVYVLLLLRSRIRRRRWRAPKSLVDRLPVRTYHTIARSTSSSETSSPRSVSPGPVS PTSPLLGAKSRSGAQLPSRSQQESHVSNASASRISSSRKGKSGSTLWRRKYTGRQVECVVCLEEYVDGQSRVMSL PCGHEFHAECITPWLTTRRRTCPICKGDVVRSMSQNKAAEAYESAEPMNEEEHHPDADSQHSSSSAPVPISGVSE DETSDLERHAGSETGLLEGQASSAPPSWRNFAALSYSALSGDTIWHQAQTDGSR* |
Coding | >Ani_SJS100_1|g3381.t1 ATGCGACCACCACGTTTGATTCTTGTCGTCTTCTGCCTCATCTTCCTCCCCATCATCCTCACGTTCTTTTCTGCT TTAACCTCCTCGCCTAGGGTGTCCACCCCCGATTCACTCGCTGGTCGAGCGACGGGACTACACGCTCTCTTCTCC TTCAACATCCCCTCATCCCTGTTCCCGCCGTCCGCCATCATCAGCCTTACCGATGACAACTCTACCTTTTTCCTG GCCCGACCTGCTGCGTTTGGCCCTCTGCTTCCGGACAAGGGACTCAGCGGCCAACTCTGGATTGGCAGTGGCTTT GGGGAACGAACAACCGCCGGAGCGGAAGGGGAGCTAGGATGCTCCGATATCCCGGGTTGGGGAGAGGGAGATGGT CCGAAGGCGGGCGGAGGTGCCGATAGTACAACTGGGAAGTCGGGGTCTACTCCTGGAAACGAGCCGACCGTGCCA CAGAGCCATCGTCAAGCGATTCCCCAGCCGGATATCGACCTGCAGCATGACTCCGGTACCAGAGCGCCATCCCCG TTGACAAATGACGGCACCGATGACCATCTCCACCACCCGCTGCCCGAGTCACAAGTACCGGACTCAGGGGCCATG GAAAAGCACGGGGAGTTCTATTCGAACCGACAAGCGGCCCATGCTGATATCCAGTCGTTGCAAGAAAGTGCTGAG ATCAACGGCAAGGTCGTCCTACTGAGTAGGGGCGGCTGTGGCTTCTTGGAGAAGGTCAAGTGGGTCCAGCGGCGT GGAGGAATTGCTTTGATTGTGGGGGATGACACCCGAGGAGGAAGCCTCGTCACGATGTATGCACGGGGTGATACA TCCAACGTGACGATCCCCGCCCTCTTCACCTCTCACACTACGGCACACCTGCTGTCATCCTTAGTCCCTCCGCAA GGGGAGGACTCGGGCGCAGACGATGGATCAGGAACACACACTAAAATATCCACTCACGGCAGTGCCGGGAAACAA CGCATGGACGCCACGGCTACTACCTCTGCCACTGCGTCGCCAACTTCAAGTCACAAAGCAGTAGTTCACGATAGT GCGATGCCTCCGAAGCAGAAGCCCGGGCTCTTCCACGCTCTTCTGTCATTGTTCGGTCTCAGCAACCATGGTGGA CCCGTCTGGTACCCACCAGAGGACAGTCGTCGCCCGCCAAGCAGCGGGAACATTAATTGGATTCTACTAGATCGC TGGGACGAACAGGAACCATCACAGGATGATACCGAGCGAAAGACCTCCCGAACGAAAACCGATGGCGTTTCCGAA GACCTCAAGAAATCAGGCACCTCGTCGAGCAGTACTGACGGTGATGGGTTCGTCATTGGAGTACAGGACTGGAGA GATCCAGACCTAGTAGTTCCGAAGGGCAGCGCCCTTCCGTCACCTACCAGCACCACCGACGCCGCCGGGAACAGG GTGCATACTGGTGTCAAGGGCTCGCACCCTACGCCTGCGACTTTAAAGGGTGGCAGCATCACTCCAGGAAGTGGC GAGTATCGCACCGTCGAGAAGTCCAGCGTTGAAAAAGAGTCGAAGGTGGAGGACTCAAGTCACAAGTCTGTGTAT GATGATGTGAAACCAGGATCCTCTTCCCAGCGCAATGGTTGGTTTGCCAGGCATTTCTTCTGGGCGACGGACAAG CCAGGTCCGAGCCCAAGCTCCAGCGCCCATGGGCAAATTACTTCCGTAGACCAGAAGCTGCATGATGCGACAGCT CAGAACGGCCAGGGCGTGAATGCCGCCGAACACGACGGCTTGTGGGTCACACTCACGCCCACGAGCATGTCGACC AGCCCTTTCTTTGATACCCTCCTCGTCTTGGTCGTCAGCCCATTACTCACGCTGACCGTTGTTTACGTCCTGCTG TTGCTGCGGTCTCGTATCCGGCGTAGACGGTGGCGCGCTCCAAAGTCCCTCGTTGATCGCCTCCCTGTGCGAACT TATCATACCATTGCGAGATCGACCTCTTCCTCGGAAACGAGCTCGCCACGATCCGTTAGCCCTGGTCCAGTGTCG CCAACCTCGCCACTGTTGGGTGCGAAAAGCCGCTCAGGAGCCCAGTTGCCGTCTCGATCCCAGCAAGAGTCGCAT GTCTCGAATGCGAGTGCGTCCAGGATATCATCATCGAGGAAGGGCAAGTCGGGGTCCACTTTGTGGCGACGGAAG TACACTGGTCGGCAAGTGGAATGTGTTGTGTGCCTGGAGGAATATGTGGATGGGCAGAGCAGGGTGATGAGTTTG CCCTGCGGCCACGAGTTCCACGCGGAGTGCATCACGCCTTGGCTGACGACCCGCCGGCGAACTTGTCCTATCTGC AAAGGAGACGTGGTTCGGTCAATGTCGCAGAACAAAGCGGCGGAGGCTTACGAGTCGGCAGAGCCGATGAACGAG GAAGAGCACCACCCTGACGCAGATTCTCAGCATAGTTCATCCTCAGCGCCGGTGCCGATCAGCGGAGTGAGCGAA GACGAGACCTCGGACCTTGAGCGGCATGCTGGCTCTGAAACAGGTCTTCTCGAGGGACAGGCGTCCTCGGCACCA CCGAGTTGGAGGAACTTTGCAGCACTGAGCTACTCTGCTCTTAGTGGCGATACGATCTGGCATCAGGCTCAGACG GACGGCAGCCGGTGA |
Transcript | >Ani_SJS100_1|g3381.t1 ATGCGACCACCACGTTTGATTCTTGTCGTCTTCTGCCTCATCTTCCTCCCCATCATCCTCACGTTCTTTTCTGCT TTAACCTCCTCGCCTAGGGTGTCCACCCCCGATTCACTCGCTGGTCGAGCGACGGGACTACACGCTCTCTTCTCC TTCAACATCCCCTCATCCCTGTTCCCGCCGTCCGCCATCATCAGCCTTACCGATGACAACTCTACCTTTTTCCTG GCCCGACCTGCTGCGTTTGGCCCTCTGCTTCCGGACAAGGGACTCAGCGGCCAACTCTGGATTGGCAGTGGCTTT GGGGAACGAACAACCGCCGGAGCGGAAGGGGAGCTAGGATGCTCCGATATCCCGGGTTGGGGAGAGGGAGATGGT CCGAAGGCGGGCGGAGGTGCCGATAGTACAACTGGGAAGTCGGGGTCTACTCCTGGAAACGAGCCGACCGTGCCA CAGAGCCATCGTCAAGCGATTCCCCAGCCGGATATCGACCTGCAGCATGACTCCGGTACCAGAGCGCCATCCCCG TTGACAAATGACGGCACCGATGACCATCTCCACCACCCGCTGCCCGAGTCACAAGTACCGGACTCAGGGGCCATG GAAAAGCACGGGGAGTTCTATTCGAACCGACAAGCGGCCCATGCTGATATCCAGTCGTTGCAAGAAAGTGCTGAG ATCAACGGCAAGGTCGTCCTACTGAGTAGGGGCGGCTGTGGCTTCTTGGAGAAGGTCAAGTGGGTCCAGCGGCGT GGAGGAATTGCTTTGATTGTGGGGGATGACACCCGAGGAGGAAGCCTCGTCACGATGTATGCACGGGGTGATACA TCCAACGTGACGATCCCCGCCCTCTTCACCTCTCACACTACGGCACACCTGCTGTCATCCTTAGTCCCTCCGCAA GGGGAGGACTCGGGCGCAGACGATGGATCAGGAACACACACTAAAATATCCACTCACGGCAGTGCCGGGAAACAA CGCATGGACGCCACGGCTACTACCTCTGCCACTGCGTCGCCAACTTCAAGTCACAAAGCAGTAGTTCACGATAGT GCGATGCCTCCGAAGCAGAAGCCCGGGCTCTTCCACGCTCTTCTGTCATTGTTCGGTCTCAGCAACCATGGTGGA CCCGTCTGGTACCCACCAGAGGACAGTCGTCGCCCGCCAAGCAGCGGGAACATTAATTGGATTCTACTAGATCGC TGGGACGAACAGGAACCATCACAGGATGATACCGAGCGAAAGACCTCCCGAACGAAAACCGATGGCGTTTCCGAA GACCTCAAGAAATCAGGCACCTCGTCGAGCAGTACTGACGGTGATGGGTTCGTCATTGGAGTACAGGACTGGAGA GATCCAGACCTAGTAGTTCCGAAGGGCAGCGCCCTTCCGTCACCTACCAGCACCACCGACGCCGCCGGGAACAGG GTGCATACTGGTGTCAAGGGCTCGCACCCTACGCCTGCGACTTTAAAGGGTGGCAGCATCACTCCAGGAAGTGGC GAGTATCGCACCGTCGAGAAGTCCAGCGTTGAAAAAGAGTCGAAGGTGGAGGACTCAAGTCACAAGTCTGTGTAT GATGATGTGAAACCAGGATCCTCTTCCCAGCGCAATGGTTGGTTTGCCAGGCATTTCTTCTGGGCGACGGACAAG CCAGGTCCGAGCCCAAGCTCCAGCGCCCATGGGCAAATTACTTCCGTAGACCAGAAGCTGCATGATGCGACAGCT CAGAACGGCCAGGGCGTGAATGCCGCCGAACACGACGGCTTGTGGGTCACACTCACGCCCACGAGCATGTCGACC AGCCCTTTCTTTGATACCCTCCTCGTCTTGGTCGTCAGCCCATTACTCACGCTGACCGTTGTTTACGTCCTGCTG TTGCTGCGGTCTCGTATCCGGCGTAGACGGTGGCGCGCTCCAAAGTCCCTCGTTGATCGCCTCCCTGTGCGAACT TATCATACCATTGCGAGATCGACCTCTTCCTCGGAAACGAGCTCGCCACGATCCGTTAGCCCTGGTCCAGTGTCG CCAACCTCGCCACTGTTGGGTGCGAAAAGCCGCTCAGGAGCCCAGTTGCCGTCTCGATCCCAGCAAGAGTCGCAT GTCTCGAATGCGAGTGCGTCCAGGATATCATCATCGAGGAAGGGCAAGTCGGGGTCCACTTTGTGGCGACGGAAG TACACTGGTCGGCAAGTGGAATGTGTTGTGTGCCTGGAGGAATATGTGGATGGGCAGAGCAGGGTGATGAGTTTG CCCTGCGGCCACGAGTTCCACGCGGAGTGCATCACGCCTTGGCTGACGACCCGCCGGCGAACTTGTCCTATCTGC AAAGGAGACGTGGTTCGGTCAATGTCGCAGAACAAAGCGGCGGAGGCTTACGAGTCGGCAGAGCCGATGAACGAG GAAGAGCACCACCCTGACGCAGATTCTCAGCATAGTTCATCCTCAGCGCCGGTGCCGATCAGCGGAGTGAGCGAA GACGAGACCTCGGACCTTGAGCGGCATGCTGGCTCTGAAACAGGTCTTCTCGAGGGACAGGCGTCCTCGGCACCA CCGAGTTGGAGGAACTTTGCAGCACTGAGCTACTCTGCTCTTAGTGGCGATACGATCTGGCATCAGGCTCAGACG GACGGCAGCCGGTGA |
Gene | >Ani_SJS100_1|g3381.t1 ATGCGACCACCACGTTTGATTCTTGTCGTCTTCTGCCTCATCTTCCTCCCCATCATCCTCACGTTCTTTTCTGCT TTAACCTCCTCGCCTAGGGTGTCCACCCCCGATTCACTCGCTGGTCGAGCGACGGGACTACACGCTCTCTTCTCC TTCAACATCCCCTCATCCCTGTTCCCGCCGTCCGCCATCATCAGCCTTACCGATGACAACTCTACCTTTTTCCTG GCCCGACCTGCTGCGTTTGGCCCTCTGCTTCCGGACAAGGGACTCAGCGGCCAACTCTGGATTGGCAGTGGCTTT GGGGAACGAACAACCGCCGGAGCGGAAGGGGAGCTAGGATGCTCCGATATCCCGGGTTGGGGAGAGGGAGATGGT CCGAAGGCGGGCGGAGGTGCCGATAGTACAACTGGGAAGTCGGGGTCTACTCCTGGAAACGAGCCGACCGTGCCA CAGAGCCATCGTCAAGCGATTCCCCAGCCGGATATCGACCTGCAGCATGACTCCGGTACCAGAGCGCCATCCCCG TTGACAAATGACGGCACCGATGACCATCTCCACCACCCGCTGCCCGAGTCACAAGTACCGGACTCAGGGGCCATG GAAAAGCACGGGGAGTTCTATTCGAACCGACAAGCGGCCCATGCTGATATCCAGTCGTTGCAAGAAAGTGCTGAG ATCAACGGCAAGGTCGTCCTACTGAGTAGGGGCGGCTGTGGCTTCTTGGAGAAGGTCAAGTGGGTCCAGCGGCGT GGAGGAATTGCTTTGATTGTGGGGGATGACACCCGAGGAGGAAGCCTCGTCACGATGTATGCACGGGGTGATACA TCCAACGTGACGATCCCCGCCCTCTTCACCTCTCACACTACGGCACACCTGCTGTCATCCTTAGTCCCTCCGCAA GGGGAGGACTCGGGCGCAGACGATGGATCAGGAACACACACTAAAATATCCACTCACGGCAGTGCCGGGAAACAA CGCATGGACGCCACGGCTACTACCTCTGCCACTGCGTCGCCAACTTCAAGTCACAAAGCAGTAGTTCACGATAGT GCGATGCCTCCGAAGCAGAAGCCCGGGCTCTTCCACGCTCTTCTGTCATTGTTCGGTCTCAGCAACCATGGTGGA CCCGTCTGGTACCCACCAGAGGACAGTCGTCGCCCGCCAAGCAGCGGGAACATTAATTGGATTCTACTAGATCGC TGGGACGAACAGGAACCATCACAGGATGATACCGAGCGAAAGACCTCCCGAACGAAAACCGATGGCGTTTCCGAA GACCTCAAGAAATCAGGCACCTCGTCGAGCAGTACTGACGGTGATGGGTTCGTCATTGGAGTACAGGACTGGAGA GATCCAGACCTAGTAGTTCCGAAGGGCAGCGCCCTTCCGTCACCTACCAGCACCACCGACGCCGCCGGGAACAGG GTGCATACTGGTGTCAAGGGCTCGCACCCTACGCCTGCGACTTTAAAGGGTGGCAGCATCACTCCAGGAAGTGGC GAGTATCGCACCGTCGAGAAGTCCAGCGTTGAAAAAGAGTCGAAGGTGGAGGACTCAAGTCACAAGTCTGTGTAT GATGATGTGAAACCAGGATCCTCTTCCCAGCGCAATGGTTGGTTTGCCAGGCATTTCTTCTGGGCGACGGACAAG CCAGGTCCGAGCCCAAGCTCCAGCGCCCATGGGCAAATTACTTCCGTAGACCAGAAGCTGCATGATGCGACAGCT CAGAACGGCCAGGGCGTGAATGCCGCCGAACACGACGGCTTGTGGGTCACACTCACGCCCACGAGCATGTCGACC AGCCCTTTCTTTGATACCCTCCTCGTCTTGGTCGTCAGCCCATTACTCACGCTGACCGTTGTTTACGTCCTGCTG TTGCTGCGGTCTCGTATCCGGCGTAGACGGTGGCGCGCTCCAAAGTCCCTCGTTGATCGCCTCCCTGTGCGAACT TATCATACCATTGCGAGATCGACCTCTTCCTCGGAAACGAGCTCGCCACGATCCGTTAGCCCTGGTCCAGTGTCG CCAACCTCGCCACTGTTGGGTGCGAAAAGCCGCTCAGGAGCCCAGTTGCCGTCTCGATCCCAGCAAGAGTCGCAT GTCTCGAATGCGAGTGCGTCCAGGATATCATCATCGAGGAAGGGCAAGTCGGGGTCCACTTTGTGGCGACGGAAG TACACTGGTCGGCAAGTGGAATGTGTTGTGTGCCTGGAGGAATATGTGGATGGGCAGAGCAGGGTGATGAGTTTG CCCTGCGGCCACGAGTTCCACGCGGAGTGCATGTAAGTCACAATGCTGGAGTCTGTTGTCAAGCATGTCCATACT AACGATACTCGCAGCACGCCTTGGCTGACGACCCGCCGGCGAACTTGTCCTATCTGCAAAGGAGACGTGGTTCGG TCAATGTCGCAGAACAAAGCGGCGGAGGCTTACGAGTCGGCAGAGCCGATGAACGAGGAAGAGCACCACCCTGAC GCAGATTCTCAGCATAGTTCATCCTCAGCGCCGGTGCCGATCAGCGGAGTGAGCGAAGACGAGACCTCGGACCTT GAGCGGCATGCTGGCTCTGAAACAGGTCTTCTCGAGGGACAGGCGTCCTCGGCACCACCGAGTTGGAGGAACTTT GCAGCACTGAGCTACTCTGCTCTTAGTGGCGATACGATCTGGCATCAGGCTCAGACGGACGGCAGCCGGTGA |