Protein ID | Ani_SJS100_1|g3380.t1 |
Gene name | |
Location | scaffold_015:282621..284920 |
Strand | + |
Gene length (bp) | 2299 |
Transcript length (bp) | 1443 |
Coding sequence length (bp) | 1443 |
Protein length (aa) | 481 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13855 | LRR_8 | Leucine rich repeat | 8.5E-10 | 233 | 286 |
PF12799 | LRR_4 | Leucine Rich repeats (2 copies) | 3.2E-06 | 252 | 289 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0005488 | binding | No |
GO:0003674 | molecular_function | No |
Orthofinder run ID | 3 |
Orthogroup | 3660 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g3380.t1 MDHEIPLPPPPRIRHRDPSNNNNNRHATRPAHHHRLPSRFIDDRSSQPSSDPALFSSDDIPASGLENYNNAPVSR KRRYRGTWWGEMVKDKDAKRKRADFKEKRLVDSGVWMGSDDYDSGPGSGFLPSDADLGEDWLNSHANGGSKTVTP QTQSQQQGFRKVEEEPREHQVARGIVNDCLERGEDSVDLSGLTLRLIPPNLLLPLQHLTKLPTIREPPISEDVYT SLQPFLRLFLAGNALTQVPGEIFDLDSLRVLSLRYNKLTSIPPAIRSLTLLQELNISVNRLPTLPWELLFLVRKG DLKHLTVRPNPLLQIEDQPIAQWHVPTDQETQEPQLKSVTYDGPPPEEAWAPVHVATGPVTYYNAEGVPVSSQIP TEQTNHQTINTSSSSSISRVPSLREISLLAFTRSTYPDLITDEEMEDFPALMTRLLRQAKEIRSAGGRNCSSCHR GFVLARTEWIEWWDETLQRQNTPTSTITYI* |
Coding | >Ani_SJS100_1|g3380.t1 ATGGACCACGAAATCCCACTCCCCCCACCACCGCGCATCCGCCATCGCGACCCCTCCAACAACAATAACAATCGT CACGCGACTCGCCCTGCTCACCACCACCGTCTCCCCTCGCGCTTCATTGACGACCGCTCCAGTCAACCTTCCAGT GATCCAGCGCTTTTCTCCAGTGACGATATCCCCGCCTCAGGACTAGAGAACTACAATAATGCGCCTGTTAGTCGG AAGCGCCGGTACCGCGGCACGTGGTGGGGAGAGATGGTGAAGGACAAGGACGCGAAGCGCAAACGGGCGGATTTC AAGGAGAAGCGCTTGGTGGATAGTGGTGTGTGGATGGGAAGTGATGATTATGACTCTGGTCCGGGGTCGGGGTTC TTGCCTTCTGATGCGGATTTGGGAGAGGATTGGCTGAACTCTCATGCGAATGGAGGTTCAAAGACGGTGACACCG CAGACTCAAAGTCAACAACAAGGATTCAGAAAAGTTGAGGAAGAACCGCGCGAGCATCAAGTCGCACGGGGAATC GTGAATGATTGTCTCGAGAGGGGGGAGGATAGTGTTGATTTGAGCGGCCTCACCCTCCGCCTCATACCCCCAAAC CTCCTCCTCCCCCTCCAACACCTCACCAAACTCCCAACCATCAGGGAGCCCCCCATCAGCGAAGACGTCTACACC TCCCTCCAACCATTCCTCCGCCTCTTCCTCGCCGGCAACGCCCTAACCCAAGTCCCCGGCGAGATCTTCGACCTC GACTCCCTCCGCGTCCTCAGTCTCCGCTACAACAAACTTACCTCCATCCCCCCGGCAATCCGCTCCCTCACCCTC CTCCAGGAACTAAACATCTCCGTGAACCGCCTCCCCACCCTCCCATGGGAACTCCTCTTCCTCGTCCGCAAAGGC GACCTCAAACACCTTACCGTTCGCCCGAACCCCCTCCTCCAAATCGAAGACCAGCCCATCGCCCAATGGCACGTT CCAACCGACCAAGAGACCCAAGAACCACAACTGAAATCAGTAACATATGACGGCCCACCTCCGGAGGAAGCATGG GCACCTGTACACGTCGCTACCGGCCCAGTTACATACTACAACGCCGAAGGCGTACCAGTCTCCTCCCAAATCCCT ACTGAACAAACCAACCACCAAACAATAAACACCAGCAGCAGCAGCAGCATCTCCCGCGTCCCCTCCCTCCGCGAA ATCTCCCTCCTAGCATTCACCCGCTCGACATACCCGGACCTAATCACAGACGAAGAAATGGAGGATTTCCCGGCC CTGATGACCCGCTTACTCCGGCAAGCGAAAGAGATTCGTAGCGCGGGGGGCAGGAACTGCTCGTCATGTCACCGG GGCTTTGTGCTCGCGCGGACAGAGTGGATCGAGTGGTGGGATGAAACGCTGCAAAGACAGAATACCCCCACCTCC ACCATCACATACATCTAA |
Transcript | >Ani_SJS100_1|g3380.t1 ATGGACCACGAAATCCCACTCCCCCCACCACCGCGCATCCGCCATCGCGACCCCTCCAACAACAATAACAATCGT CACGCGACTCGCCCTGCTCACCACCACCGTCTCCCCTCGCGCTTCATTGACGACCGCTCCAGTCAACCTTCCAGT GATCCAGCGCTTTTCTCCAGTGACGATATCCCCGCCTCAGGACTAGAGAACTACAATAATGCGCCTGTTAGTCGG AAGCGCCGGTACCGCGGCACGTGGTGGGGAGAGATGGTGAAGGACAAGGACGCGAAGCGCAAACGGGCGGATTTC AAGGAGAAGCGCTTGGTGGATAGTGGTGTGTGGATGGGAAGTGATGATTATGACTCTGGTCCGGGGTCGGGGTTC TTGCCTTCTGATGCGGATTTGGGAGAGGATTGGCTGAACTCTCATGCGAATGGAGGTTCAAAGACGGTGACACCG CAGACTCAAAGTCAACAACAAGGATTCAGAAAAGTTGAGGAAGAACCGCGCGAGCATCAAGTCGCACGGGGAATC GTGAATGATTGTCTCGAGAGGGGGGAGGATAGTGTTGATTTGAGCGGCCTCACCCTCCGCCTCATACCCCCAAAC CTCCTCCTCCCCCTCCAACACCTCACCAAACTCCCAACCATCAGGGAGCCCCCCATCAGCGAAGACGTCTACACC TCCCTCCAACCATTCCTCCGCCTCTTCCTCGCCGGCAACGCCCTAACCCAAGTCCCCGGCGAGATCTTCGACCTC GACTCCCTCCGCGTCCTCAGTCTCCGCTACAACAAACTTACCTCCATCCCCCCGGCAATCCGCTCCCTCACCCTC CTCCAGGAACTAAACATCTCCGTGAACCGCCTCCCCACCCTCCCATGGGAACTCCTCTTCCTCGTCCGCAAAGGC GACCTCAAACACCTTACCGTTCGCCCGAACCCCCTCCTCCAAATCGAAGACCAGCCCATCGCCCAATGGCACGTT CCAACCGACCAAGAGACCCAAGAACCACAACTGAAATCAGTAACATATGACGGCCCACCTCCGGAGGAAGCATGG GCACCTGTACACGTCGCTACCGGCCCAGTTACATACTACAACGCCGAAGGCGTACCAGTCTCCTCCCAAATCCCT ACTGAACAAACCAACCACCAAACAATAAACACCAGCAGCAGCAGCAGCATCTCCCGCGTCCCCTCCCTCCGCGAA ATCTCCCTCCTAGCATTCACCCGCTCGACATACCCGGACCTAATCACAGACGAAGAAATGGAGGATTTCCCGGCC CTGATGACCCGCTTACTCCGGCAAGCGAAAGAGATTCGTAGCGCGGGGGGCAGGAACTGCTCGTCATGTCACCGG GGCTTTGTGCTCGCGCGGACAGAGTGGATCGAGTGGTGGGATGAAACGCTGCAAAGACAGAATACCCCCACCTCC ACCATCACATACATCTAA |
Gene | >Ani_SJS100_1|g3380.t1 ATGGACCACGAAATCCCACTCCCCCCACCACCGCGCATCCGCCATCGCGACCCCTCCAACAACAATAACAATCGT CACGCGACTCGCCCTGCTCACCACCACCGTCTCCCCTCGCGCTTCATTGACGACCGCTCCAGTCAACCTTCCAGT GATCCAGCGCTTTTCTCCAGTGACGATATCCCCGCCTCAGGACTAGAGAACTACAATAATGCGCCTGTTAGTCGG AAGCGCCGGTACCGCGGCACGTGGTGGGGAGAGATGGTGAAGGACAAGGACGCGAAGCGCAAACGGGCGGATTTC AAGGAGAAGCGCTTGGTGGATAGTGGTGTGTGGATGGGAAGTGATGATTATGACTCTGGTCCGGGGTCGGGGTTC TTGCCTTCTGATGCGGATTTGGGAGAGGATTGGCTGAACTCTCATGCGAATGGAGGTTCAAAGACGGTGACACCG CAGACTCAAAGTCAACAACAAGGATTCAGAAAAGTTGAGGAAGAACCGCGCGAGCATCAAGTCGCACGGGGAATC GTGAATGATTGTCTCGAGAGGGGGGAGGATAGTGTTGATTTGAGGTAATCCCCTACATTTCTTCGCCCATCATCC AGAAACAACCTTAACCTATATCCATGTCTAGCGGCCTCACCCTCCGCCTCATACCCCCAAACCTCCTCCTCCCCC TCCAACACCTCACCAAACTCCCAACCATCAGGGAGCCCCCCATCAGCGAAGACGTCTACACCTCCCTCCAACCAT TCCTCCGCCTCTTCCTCGCCGGCAACGCCCTAACCCAAGTCCCCGGCGAGATCTTCGACCTCGACTCCCTCCGCG TCCTCAGTCTCCGCTACAACAAACTTACCTCCATCCCCCCGGCAATCCGCTCCCTCACCCTCCTCCAGGAACTAA ACATCTCCGTGAACCGCCTCCCCACCCTCCCATGGGAACTCCTCTTCCTCGTCCGCAAAGGCGACCTCAAACACC TTACCGTTCGCCCGAACCCCCTCCTCCAAATCGAAGACCAGCCCATCGCCCAATGGCACGTTCCAACCGACCAAG AGACCCAAGAACCACAACTGAAATCAGTAACATATGACGGCCCACCTCCGGAGGAAGCATGGGCACCTGTACACG TCGCTACCGGCCCAGTTACATACTACAACGCCGAAGGCGTACCAGTCTCCTCCCAAATCCCTACTGAACAAACCA ACCACCAAACAATAAACACCAGCAGCAGCAGCAGCATCTCCCGCGTCCCCTCCCTCCGCGAAATCTCCCTCCTAG CATTCACCCGCTCGACATACCCGGACCTAATCACAGACGAAGAAATGGAGGATTTCCCGGCCCTGATGACCCGCT TACTCCGGCAAGCGAAAGAGATTCGTAGCGCGGGGGGCAGGAACTGCTCGTCATGTCACCGGGGCTTTGTGCTCG CGCGGACAGAGTGGATCGAGTGGTGGGATGTCAGTACGTATGAGAATGGGTTGAAGGGACCTAGGGCATCTGGGG AAGTGTTGAGACCGTTGCCGTTTAGGAGAGTTGGGTGTAGTTGGGGATGTGTGCCTGAGGTTGTTTGATTTTGAT GTCATGACAGGAAGTATGTATAGTAAGTTTGGTTGTGGGTATATATGTATGTATGGATGGATGGATGGATGTAAA TGATTATAAGTTCTCATTAGGGGTGTGAGTTCTAGAGTAGTGAGTGTCTGTTTGTAATGTATCCCGGAGGGGAGG GGGGGTTGTATGACTTGATGTATATGTCTAAGGAGTTTAGCGATTTGCATGGCTTGGTTGTTCCGTCGGACTTGA GTTATTGGGCGAGTTGATGGCCAGCCGATGTAGATATGCTGGCATGTGCCCACGTTCAAAGTTGTCTACGGGTCT GATCTTCATTTACTTACTACTTACGAGGTGTGTCAAGATGGTTCGGAACGATGCCAGTTACTTGGACAGCGAAAG TGACATTAAAACACCCCGCGGTATCAGACTAACGCAGTCGTAGACTACATCACCTGTCGTTGAACGTGCCGATTT TGTTTCGGGATTTGCTCAATATTCATGTTCAAAGCAAATGAATACGTCCTAAGCACCGGTGGGAAAAGTGATTCC CGGAGGCTTATGGTCTGGTAATATTACAAGTGAGTGCAGAACTGAAACTAAACTGTTCCTGCCAATGTCGCTACG GCTTCCATAAAATCCATCAAACGCCAACCAAGCAAGGACGGTGTCAAAACATCGCTAATGCTGCTCACAAAAGGA AACGCTGCAAAGACAGAATACCCCCACCTCCACCATCACATACATCTAA |