© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g3371.t1 |
| Gene name | |
| Location | scaffold_015:260011..260915 |
| Strand | - |
| Gene length (bp) | 904 |
| Transcript length (bp) | 822 |
| Coding sequence length (bp) | 822 |
| Protein length (aa) | 274 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF06912 | DUF1275 | Protein of unknown function (DUF1275) | 1.5E-45 | 48 | 263 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 63 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 65 | 87 | 22 |
| 2 | 94 | 116 | 22 |
| 3 | 131 | 150 | 19 |
| 4 | 224 | 241 | 17 |
| 5 | 246 | 268 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g3371.t1 MSEPFHPAKSPALPVVESSTNTKSPHSQETKVRRLRETVDSNYADIICIILCFVTGLCDSSAFNAWSCFLAMQTG NTVVLGLGAASLPRDDSDSWLKSLVSIASFVTGSFTFSFVGRHLGPARRGTLFASFMVQVILIVIAVSLIQSGLI AESEDVVTSKHHGGKLLELIPIGLLAFQSSGSINSTRSLGFNEIPSVVITSVYFDIASDKNILAVQNVKRNRRVA GVVALLIGAIVGGWLNRSAGGMASTFWLAAGIKFAIGLGWLFWMPVRG* |
| Coding | >Ani_SJS100_1|g3371.t1 ATGTCAGAGCCCTTTCATCCCGCGAAATCACCGGCCCTCCCGGTCGTGGAATCCTCCACCAACACCAAATCCCCT CACTCTCAAGAGACGAAAGTGCGCCGGTTAAGAGAAACTGTCGATAGCAATTATGCCGACATCATCTGTATCATT CTCTGCTTCGTCACGGGGCTTTGCGACAGCTCCGCATTCAATGCGTGGTCATGCTTCTTAGCTATGCAAACCGGA AACACCGTCGTCCTCGGCCTCGGCGCCGCCTCCCTCCCCAGAGATGACAGCGACAGCTGGCTAAAATCCCTCGTC TCGATCGCCAGCTTCGTCACGGGTTCATTCACATTCAGCTTCGTCGGACGACACCTCGGTCCCGCCCGTCGCGGC ACACTTTTCGCCTCATTCATGGTGCAAGTGATTCTCATCGTGATCGCCGTCTCCCTGATACAGTCCGGACTTATC GCGGAATCCGAAGATGTCGTCACCTCCAAACACCATGGCGGCAAGCTCCTAGAGCTGATTCCTATTGGCTTGCTG GCCTTCCAGTCCTCCGGGTCTATCAATAGTACGCGCTCGTTAGGTTTCAATGAGATTCCGAGTGTTGTTATCACG AGCGTGTATTTTGATATTGCTTCCGATAAGAATATCCTCGCTGTGCAGAATGTTAAAAGGAATAGGAGGGTTGCT GGGGTGGTGGCGCTGTTGATTGGGGCGATTGTGGGTGGGTGGTTGAATAGGAGTGCTGGGGGTATGGCGTCGACT TTTTGGTTGGCGGCGGGGATTAAGTTCGCGATTGGGTTGGGGTGGTTGTTTTGGATGCCTGTTAGGGGGTAG |
| Transcript | >Ani_SJS100_1|g3371.t1 ATGTCAGAGCCCTTTCATCCCGCGAAATCACCGGCCCTCCCGGTCGTGGAATCCTCCACCAACACCAAATCCCCT CACTCTCAAGAGACGAAAGTGCGCCGGTTAAGAGAAACTGTCGATAGCAATTATGCCGACATCATCTGTATCATT CTCTGCTTCGTCACGGGGCTTTGCGACAGCTCCGCATTCAATGCGTGGTCATGCTTCTTAGCTATGCAAACCGGA AACACCGTCGTCCTCGGCCTCGGCGCCGCCTCCCTCCCCAGAGATGACAGCGACAGCTGGCTAAAATCCCTCGTC TCGATCGCCAGCTTCGTCACGGGTTCATTCACATTCAGCTTCGTCGGACGACACCTCGGTCCCGCCCGTCGCGGC ACACTTTTCGCCTCATTCATGGTGCAAGTGATTCTCATCGTGATCGCCGTCTCCCTGATACAGTCCGGACTTATC GCGGAATCCGAAGATGTCGTCACCTCCAAACACCATGGCGGCAAGCTCCTAGAGCTGATTCCTATTGGCTTGCTG GCCTTCCAGTCCTCCGGGTCTATCAATAGTACGCGCTCGTTAGGTTTCAATGAGATTCCGAGTGTTGTTATCACG AGCGTGTATTTTGATATTGCTTCCGATAAGAATATCCTCGCTGTGCAGAATGTTAAAAGGAATAGGAGGGTTGCT GGGGTGGTGGCGCTGTTGATTGGGGCGATTGTGGGTGGGTGGTTGAATAGGAGTGCTGGGGGTATGGCGTCGACT TTTTGGTTGGCGGCGGGGATTAAGTTCGCGATTGGGTTGGGGTGGTTGTTTTGGATGCCTGTTAGGGGGTAG |
| Gene | >Ani_SJS100_1|g3371.t1 ATGTCAGAGCCCTTTCATCCCGCGAAATCACCGGCCCTCCCGGTCGTGGAATCCTCCACCAACACCAAATCCCCT CACTCTCAAGAGACGAAAGTGCGCCGGTTAAGAGAAACTGTCGATAGCAATTATGCCGACATCATCTGTATCATT CTCTGCTTCGTCACGGGGCTTTGCGACAGCTCCGCATTCAATGCGTGGTCATGCTTCTTAGCTATGCAAACCGGT ACGTCTATCTTATCCCCTTATCCTACTACACCACTTCCCTCCTATTACTCACATACTGATAATATCCTTGAATTA AACAGGAAACACCGTCGTCCTCGGCCTCGGCGCCGCCTCCCTCCCCAGAGATGACAGCGACAGCTGGCTAAAATC CCTCGTCTCGATCGCCAGCTTCGTCACGGGTTCATTCACATTCAGCTTCGTCGGACGACACCTCGGTCCCGCCCG TCGCGGCACACTTTTCGCCTCATTCATGGTGCAAGTGATTCTCATCGTGATCGCCGTCTCCCTGATACAGTCCGG ACTTATCGCGGAATCCGAAGATGTCGTCACCTCCAAACACCATGGCGGCAAGCTCCTAGAGCTGATTCCTATTGG CTTGCTGGCCTTCCAGTCCTCCGGGTCTATCAATAGTACGCGCTCGTTAGGTTTCAATGAGATTCCGAGTGTTGT TATCACGAGCGTGTATTTTGATATTGCTTCCGATAAGAATATCCTCGCTGTGCAGAATGTTAAAAGGAATAGGAG GGTTGCTGGGGTGGTGGCGCTGTTGATTGGGGCGATTGTGGGTGGGTGGTTGAATAGGAGTGCTGGGGGTATGGC GTCGACTTTTTGGTTGGCGGCGGGGATTAAGTTCGCGATTGGGTTGGGGTGGTTGTTTTGGATGCCTGTTAGGGG GTAG |