Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g3370.t1
Gene name
Locationscaffold_015:258831..259439
Strand+
Gene length (bp)608
Transcript length (bp)327
Coding sequence length (bp)327
Protein length (aa) 109

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10247 Romo1 Reactive mitochondrial oxygen species modulator 1 1.8E-28 14 79

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 35 0.5

Transmembrane Domains

Domain # Start End Length
1 26 48 22
2 55 77 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g3370.t1
MPVVAGPPQGHGPSTFEKMKMGAMMGSTVGGIMGFIIGTVTIFQYGAGPNGVMRTLGKYMLGSGATFGLFMSIGS
VIRTEGPHNDAWLRARGPPMMLPRQSPLRPMRD*
Coding >Ani_SJS100_1|g3370.t1
ATGCCCGTCGTTGCTGGTCCCCCCCAAGGGCATGGTCCCTCTACCTTTGAGAAGATGAAGATGGGTGCCATGATG
GGATCCACTGTTGGAGGTATCATGGGCTTCATCATCGGAACTGTCACCATCTTCCAGTACGGGGCTGGACCTAAC
GGTGTTATGCGTACCCTGGGTAAATATATGCTTGGTTCTGGTGCTACTTTTGGTCTCTTCATGTCCATCGGCAGC
GTTATTCGTACCGAAGGCCCTCACAACGATGCCTGGCTCCGCGCTCGCGGACCCCCGATGATGCTCCCCCGTCAG
AGCCCTCTGCGCCCTATGCGCGACTAA
Transcript >Ani_SJS100_1|g3370.t1
ATGCCCGTCGTTGCTGGTCCCCCCCAAGGGCATGGTCCCTCTACCTTTGAGAAGATGAAGATGGGTGCCATGATG
GGATCCACTGTTGGAGGTATCATGGGCTTCATCATCGGAACTGTCACCATCTTCCAGTACGGGGCTGGACCTAAC
GGTGTTATGCGTACCCTGGGTAAATATATGCTTGGTTCTGGTGCTACTTTTGGTCTCTTCATGTCCATCGGCAGC
GTTATTCGTACCGAAGGCCCTCACAACGATGCCTGGCTCCGCGCTCGCGGACCCCCGATGATGCTCCCCCGTCAG
AGCCCTCTGCGCCCTATGCGCGACTAA
Gene >Ani_SJS100_1|g3370.t1
ATGCCCGTCGTTGCTGGTCCCCCCCAAGGGCATGGTCCCTCTACCTTTGAGAAGAGTTAGTTAAACGGATCCCAT
GCCATTCACCAGCTGGATGAGTTTCGCCCTCAGTCTGCCGTACGGATCAACTAACATGTTTTACAGTGAAGATGG
GTGCCATGATGGGATCCAGTAGGTTAAAGAAGTGTGCAAGCTGATTAATACGGTACTAATCATTCCCAACAGCTG
TTGGAGGTATCATGGGCTTCATCATCGGTTCGTCTATGCAAACGTAACCCCTCCTCCGAACCCGACTAATATGGA
GCAGGAACTGTCACCATCTTCCAGTACGGGGCTGGACCTAACGGTGTTATGCGTACCCTGGGTAAATATATGCTT
GGTTCTGGTGCTACTTTTGGGTACGTTCTGCGCAATTCCTTGCGATTCTATGTCTATTTATCGGTTCTGTATGTT
CGACTGGATAATACTAATCATACTCTTTTGATAGTCTCTTCATGTCCATCGGCAGCGTTATTCGTACCGAAGGCC
CTCACAACGATGCCTGGCTCCGCGCTCGCGGACCCCCGATGATGCTCCCCCGTCAGAGCCCTCTGCGCCCTATGC
GCGACTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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