Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g3319.t1
Gene name
Locationscaffold_015:114949..115457
Strand-
Gene length (bp)508
Transcript length (bp)315
Coding sequence length (bp)315
Protein length (aa) 105

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03656 Pam16 Pam16 1.8E-07 37 102

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 20 0.5

Transmembrane Domains

Domain # Start End Length
1 4 22 18

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g3319.t1
MSTIAIGLGVATAAFLGRAGLVAYRRSKGGVNAMGKAFYKGGFEQRMTRREAALILELPERTLNKDKVRKKHRQL
MLLNHPDRGGSPYLATKINEAKEFLDKHT*
Coding >Ani_SJS100_1|g3319.t1
ATGTCTACCATTGCTATCGGTCTTGGTGTCGCTACTGCGGCCTTCCTGGGTCGCGCCGGTCTTGTTGCCTACCGT
CGCTCCAAGGGAGGTGTGAACGCCATGGGCAAGGCCTTCTACAAGGGTGGTTTCGAGCAGCGCATGACTCGCCGT
GAGGCCGCCTTGATTCTCGAGCTTCCGGAGCGTACCCTGAACAAGGACAAGGTCCGCAAGAAGCACCGTCAGCTC
ATGCTGCTCAACCACCCCGATCGTGGAGGCAGCCCGTACCTGGCGACTAAGATCAACGAGGCCAAGGAGTTCCTC
GACAAACACACTTAA
Transcript >Ani_SJS100_1|g3319.t1
ATGTCTACCATTGCTATCGGTCTTGGTGTCGCTACTGCGGCCTTCCTGGGTCGCGCCGGTCTTGTTGCCTACCGT
CGCTCCAAGGGAGGTGTGAACGCCATGGGCAAGGCCTTCTACAAGGGTGGTTTCGAGCAGCGCATGACTCGCCGT
GAGGCCGCCTTGATTCTCGAGCTTCCGGAGCGTACCCTGAACAAGGACAAGGTCCGCAAGAAGCACCGTCAGCTC
ATGCTGCTCAACCACCCCGATCGTGGAGGCAGCCCGTACCTGGCGACTAAGATCAACGAGGCCAAGGAGTTCCTC
GACAAACACACTTAA
Gene >Ani_SJS100_1|g3319.t1
ATGTCTACCATTGCTATCGGTCTTGGTGTCGCTACTGCGGCCTTCCTGGTAAGTCTGACTTGGGAACTGGGCTGT
ATCCGCATGCTGGATGACATGAGGCTAATACGTACTTTCATCTGCCAGGGTCGCGCCGGTCTTGTTGCCTACCGT
CGCTCCAAGGGAGGTGTGAACGCCATGGGCAAGGCCTTCTACAAGGGGTTAGTCATATGCCGTTATATCATGAGT
TACCGTCATCGATCGCTAACTAGTATTCAGTGGTTTCGAGCAGCGCATGACTCGCCGTGAGGCCGCCTTGATTCT
CGAGCTTCCGTACGTCTCAACCCTTCAGACACGCCATATTTTTCGATTTTTTTCTAACCAACTATATAGGGAGCG
TACCCTGAACAAGGACAAGGTCCGCAAGAAGCACCGTCAGCTCATGCTGCTCAACCACCCCGATCGTGGAGGCAG
CCCGTACCTGGCGACTAAGATCAACGAGGCCAAGGAGTTCCTCGACAAACACACTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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