Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g3310.t1
Gene name
Locationscaffold_015:80386..80786
Strand+
Gene length (bp)400
Transcript length (bp)333
Coding sequence length (bp)333
Protein length (aa) 111

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03226 Yippee-Mis18 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 6.8E-19 14 108

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 17 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g3310.t1
MGLAYNIYLTSNKIFGCKQCKTHLADYDDIISRNFRGQHGKAYLFGNVVNITSSEAVERSMTTGRHIVRDIHCRQ
CKETVGWKYDKAYEASEKYKEGKFILEEELLCVVC*
Coding >Ani_SJS100_1|g3310.t1
ATGGGTCTGGCATACAACATCTATCTTACTTCAAACAAAATCTTCGGGTGTAAGCAATGCAAAACTCACCTCGCT
GACTACGACGATATCATAAGCCGGAATTTCCGCGGCCAGCATGGCAAAGCATACCTCTTCGGCAATGTCGTCAAC
ATCACCTCATCCGAAGCGGTGGAGCGTAGCATGACCACCGGAAGGCATATTGTCCGCGATATTCACTGCAGGCAG
TGCAAGGAGACGGTGGGCTGGAAGTATGACAAAGCATACGAGGCCAGCGAGAAATATAAAGAGGGCAAATTTATA
CTGGAAGAAGAACTGCTGTGCGTGGTGTGCTAG
Transcript >Ani_SJS100_1|g3310.t1
ATGGGTCTGGCATACAACATCTATCTTACTTCAAACAAAATCTTCGGGTGTAAGCAATGCAAAACTCACCTCGCT
GACTACGACGATATCATAAGCCGGAATTTCCGCGGCCAGCATGGCAAAGCATACCTCTTCGGCAATGTCGTCAAC
ATCACCTCATCCGAAGCGGTGGAGCGTAGCATGACCACCGGAAGGCATATTGTCCGCGATATTCACTGCAGGCAG
TGCAAGGAGACGGTGGGCTGGAAGTATGACAAAGCATACGAGGCCAGCGAGAAATATAAAGAGGGCAAATTTATA
CTGGAAGAAGAACTGCTGTGCGTGGTGTGCTAG
Gene >Ani_SJS100_1|g3310.t1
ATGGGTCTGGCATACAACATCTATCTTACTTCAAACAAAATCTTCGGGTGTAAGCAATGCAAAACTCACCTCGCT
GACTACGACGATATCATAAGCCGGGTGAGTTGGGATACTCCCATGACATATTTCTGTGACCTACTAATCATGTAT
CTTCACTGTCATCCAGAATTTCCGCGGCCAGCATGGCAAAGCATACCTCTTCGGCAATGTCGTCAACATCACCTC
ATCCGAAGCGGTGGAGCGTAGCATGACCACCGGAAGGCATATTGTCCGCGATATTCACTGCAGGCAGTGCAAGGA
GACGGTGGGCTGGAAGTATGACAAAGCATACGAGGCCAGCGAGAAATATAAAGAGGGCAAATTTATACTGGAAGA
AGAACTGCTGTGCGTGGTGTGCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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