© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g3300.t1 |
| Gene name | |
| Location | scaffold_015:52443..53290 |
| Strand | + |
| Gene length (bp) | 847 |
| Transcript length (bp) | 795 |
| Coding sequence length (bp) | 795 |
| Protein length (aa) | 265 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00561 | Abhydrolase_1 | alpha/beta hydrolase fold | 5.0E-19 | 27 | 142 |
| PF12146 | Hydrolase_4 | Serine aminopeptidase, S33 | 8.4E-20 | 26 | 242 |
| PF12697 | Abhydrolase_6 | Alpha/beta hydrolase family | 8.1E-17 | 28 | 252 |
| PF03096 | Ndr | Ndr family | 3.5E-07 | 70 | 252 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 17 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g3300.t1 MPTVTVNNHQIYYADTHPDGAPANGQTIIFIHGLGSSQNYYFPILPYLNNHRCITLDTYGSARSTYTGDAISIAS IASDVVGVLDALQVPKAVAVGHSMGGLVVTLLGAQYGDRISGVVAIGPTHPSEKLTEVMTQRSETVSKAGMEPMA NTIPNGATGSRSSALVKSFIRELIIGQNPKGYAALCLAIANAPVIDYSKVTAPYLLIAGEEDKSASMEGCEHIHA SVSSAQKKLEVLRGVGHWHCVEAPEEVGGLIGGFVQTLY* |
| Coding | >Ani_SJS100_1|g3300.t1 ATGCCGACCGTCACCGTCAACAACCACCAAATCTACTACGCCGATACCCACCCGGACGGTGCTCCGGCCAACGGC CAGACCATCATCTTCATCCACGGCCTGGGCTCGTCGCAGAACTACTACTTCCCTATCCTCCCTTACCTGAATAAC CACCGCTGCATCACTCTCGATACCTACGGCTCAGCCCGGTCCACATACACCGGCGACGCCATCAGCATTGCCTCC ATCGCATCCGATGTCGTGGGAGTCTTAGATGCACTACAAGTGCCCAAGGCCGTGGCCGTCGGCCACTCAATGGGC GGCCTTGTAGTAACCCTCCTGGGCGCACAGTACGGCGACCGCATATCAGGCGTCGTAGCTATCGGACCTACTCAC CCGTCTGAGAAGCTCACAGAGGTGATGACGCAGCGCAGCGAGACAGTCTCAAAGGCTGGCATGGAACCCATGGCA AACACCATCCCCAATGGAGCAACTGGCTCCCGCAGCTCCGCACTCGTCAAGTCGTTCATTCGTGAACTGATCATT GGACAGAACCCCAAGGGTTACGCGGCGCTCTGCTTGGCGATTGCTAATGCGCCGGTGATTGATTACTCGAAGGTT ACGGCGCCGTACTTGCTGATTGCGGGCGAGGAGGATAAGTCGGCGTCGATGGAGGGGTGCGAGCATATCCATGCG AGCGTGTCGAGTGCGCAGAAGAAGTTGGAGGTGTTGCGGGGAGTCGGGCATTGGCATTGTGTGGAGGCGCCGGAG GAGGTTGGAGGGCTTATTGGGGGGTTTGTGCAAACCCTGTACTAA |
| Transcript | >Ani_SJS100_1|g3300.t1 ATGCCGACCGTCACCGTCAACAACCACCAAATCTACTACGCCGATACCCACCCGGACGGTGCTCCGGCCAACGGC CAGACCATCATCTTCATCCACGGCCTGGGCTCGTCGCAGAACTACTACTTCCCTATCCTCCCTTACCTGAATAAC CACCGCTGCATCACTCTCGATACCTACGGCTCAGCCCGGTCCACATACACCGGCGACGCCATCAGCATTGCCTCC ATCGCATCCGATGTCGTGGGAGTCTTAGATGCACTACAAGTGCCCAAGGCCGTGGCCGTCGGCCACTCAATGGGC GGCCTTGTAGTAACCCTCCTGGGCGCACAGTACGGCGACCGCATATCAGGCGTCGTAGCTATCGGACCTACTCAC CCGTCTGAGAAGCTCACAGAGGTGATGACGCAGCGCAGCGAGACAGTCTCAAAGGCTGGCATGGAACCCATGGCA AACACCATCCCCAATGGAGCAACTGGCTCCCGCAGCTCCGCACTCGTCAAGTCGTTCATTCGTGAACTGATCATT GGACAGAACCCCAAGGGTTACGCGGCGCTCTGCTTGGCGATTGCTAATGCGCCGGTGATTGATTACTCGAAGGTT ACGGCGCCGTACTTGCTGATTGCGGGCGAGGAGGATAAGTCGGCGTCGATGGAGGGGTGCGAGCATATCCATGCG AGCGTGTCGAGTGCGCAGAAGAAGTTGGAGGTGTTGCGGGGAGTCGGGCATTGGCATTGTGTGGAGGCGCCGGAG GAGGTTGGAGGGCTTATTGGGGGGTTTGTGCAAACCCTGTACTAA |
| Gene | >Ani_SJS100_1|g3300.t1 ATGCCGACCGTCACCGTCAACAACCACCAAATCTACTACGCCGATACCCACCCGGACGGTGCTCCGGCCAACGGC CAGACCATCATCTTCATCCACGGCCTGGGCTCGTCGCAGAACTACTACTTCCCTATCCTCCCTTACCTGAATAAC CACCGCTGCATCACTCTCGATACCTACGGCTCAGCCCGGTCCACATACACCGGCGACGCCATCAGCATTGCCTCC ATCGCATCCGATGTCGTGGGAGTCTTAGATGCACTACAAGTGCCCAAGGCCGTGGCCGTCGGCCACTCAATGGGC GGCCTTGTAGTAACCCTCCTGGGCGCACAGTACGGCGACCGCATATCAGGCGTCGTAGCTATCGGACCTACTCAC CCGTCTGAGAAGCTCACAGAGGTGATGACGCAGCGCAGCGAGACAGTCTCAAAGGGTGAGCAGCCACCAAATCAG TCATCTTGTATTAACACTGACATCTATCCCAGCTGGCATGGAACCCATGGCAAACACCATCCCCAATGGAGCAAC TGGCTCCCGCAGCTCCGCACTCGTCAAGTCGTTCATTCGTGAACTGATCATTGGACAGAACCCCAAGGGTTACGC GGCGCTCTGCTTGGCGATTGCTAATGCGCCGGTGATTGATTACTCGAAGGTTACGGCGCCGTACTTGCTGATTGC GGGCGAGGAGGATAAGTCGGCGTCGATGGAGGGGTGCGAGCATATCCATGCGAGCGTGTCGAGTGCGCAGAAGAA GTTGGAGGTGTTGCGGGGAGTCGGGCATTGGCATTGTGTGGAGGCGCCGGAGGAGGTTGGAGGGCTTATTGGGGG GTTTGTGCAAACCCTGTACTAA |