© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g3294.t1 |
| Gene name | |
| Location | scaffold_015:32846..34652 |
| Strand | - |
| Gene length (bp) | 1806 |
| Transcript length (bp) | 375 |
| Coding sequence length (bp) | 375 |
| Protein length (aa) | 125 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00249 | Myb_DNA-binding | Myb-like DNA-binding domain | 9.6E-09 | 35 | 75 |
| PF13921 | Myb_DNA-bind_6 | Myb-like DNA-binding domain | 3.9E-06 | 36 | 75 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 37 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g3294.t1 MAAPGAAPATGETAHEQGPGGSEPAPKKKGRTNTPWTAEEEQRLKTMRDAGRTWSEIAKTFPTRTEGSVKKHWYK DMHYAEFAEDESVALREAIREYDANKWKAIGLKVGKPAKACEHIDQKLV* |
| Coding | >Ani_SJS100_1|g3294.t1 ATGGCGGCGCCAGGCGCGGCTCCGGCAACTGGAGAAACCGCGCACGAGCAAGGGCCTGGGGGATCAGAGCCTGCC CCCAAGAAGAAGGGGAGGACCAACACTCCTTGGACTGCTGAGGAAGAGCAGAGGCTGAAGACTATGCGCGATGCG GGTCGCACCTGGAGCGAGATTGCCAAGACATTCCCTACCCGGACCGAAGGTAGCGTCAAGAAGCATTGGTACAAG GACATGCACTATGCCGAATTTGCTGAAGATGAGTCCGTAGCACTCCGAGAAGCGATTAGGGAATACGATGCGAAT AAATGGAAGGCGATTGGACTGAAAGTTGGAAAGCCAGCCAAGGCGTGCGAACACATTGATCAAAAACTGGTGTAA |
| Transcript | >Ani_SJS100_1|g3294.t1 ATGGCGGCGCCAGGCGCGGCTCCGGCAACTGGAGAAACCGCGCACGAGCAAGGGCCTGGGGGATCAGAGCCTGCC CCCAAGAAGAAGGGGAGGACCAACACTCCTTGGACTGCTGAGGAAGAGCAGAGGCTGAAGACTATGCGCGATGCG GGTCGCACCTGGAGCGAGATTGCCAAGACATTCCCTACCCGGACCGAAGGTAGCGTCAAGAAGCATTGGTACAAG GACATGCACTATGCCGAATTTGCTGAAGATGAGTCCGTAGCACTCCGAGAAGCGATTAGGGAATACGATGCGAAT AAATGGAAGGCGATTGGACTGAAAGTTGGAAAGCCAGCCAAGGCGTGCGAACACATTGATCAAAAACTGGTGTAA |
| Gene | >Ani_SJS100_1|g3294.t1 ATGGCGGCGCCAGGCGCGGCTCCGGCAACTGGAGAAACCGCGCACGAGCAAGGGCCTGGGGGATCAGAGCCTGCC CCCAAGAAGAAGGGGAGGACCAACACTCCTTGGACTGCTGAGGAAGAGCAGAGGCTGAAGACTATGCGCGATGCG GGTCGCACCTGGAGCGAGATTGCCAAGGTCCATAAAGCGCCCCTGCTTCAATACCCTCCACTACGTCACGCATGC TGACCTGAAATTCCCGGGTGCTACAGACATTCCCTACCCGGACCGAAGGTAGCGTCAAGAAGCATTGGTACAAGG TAAGCAGATCCTAGTCGCTCTTTGTCCGAAGACAGGAGAAGATACTTAAGCCACGACAGGACATGCACTATGCCG AATTTGCTGAAGATGAGGTAACGACCCTTGGCATACGACTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAAATGAG AAAATTAAAAAAATAATGTAAAAAAAAAAAAAAAAATTAAGGTAAAACGAGAGAAAAAANNNNNNNNNNTTTTAT TTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCTTTTTATTATTTTTTTTTTTTTTTTTTTTTTTTTTG TCAAGCGATGCTAAAAGGAAGGACAGTCCGTAGCACTCCGAGAAGCGATTAGGGAATACGATGCGAATAAATGGA AGGCGATTGGACTGAAAGTTGGAAAGCCAGCCAAGGTAACATCTCCGGGCCCTGTAGATGCCTTGCTGAGTTGTT GACATGAGTGAATCAGGCGTGCGAACAGTATGCAAAAGAACATTTCAAGGATCTTTAGATTTCTTACGAACTATT GACGACGTGATGACCAATGCATCGTCTTCCGCACATTTAACGAATCGACGATGGGCATGAGTTTTGGATTCACAT TGCTTTAGGCTGAAGATTTCAAGGCAGTGTTCGATGTTAGCCACAATTTGCAAAGTATCGGGCGAAGGGTTATCG GAGTTGGCTTGCGTCTTTCGTTTTACTTTCTGCTGGTCCCGTTTGGTCGACTATTTCCCACCTCTTCTTTTTACA AGCGCCTTTCCTGGTTACTTCGTCTTGTTCCTCGTCCCCTCATATCCTGGGTGAATACCACTGTTCGTTTCGCGT AACTCCTTGACGGGTCTTTGCAGCAGCTTTTCGCCGCGGAAGGGACAGCGTACCCTGGACAGAAATTCTGTCGCG CACCCAACAACACGTTGAAGCTTGCTGTAAGGTTTTCAATTTTTTCTATAGAAAGGAATTTAGTAGAAGCTTTCT CTCGGTGTCCGGCACTGAGTGGTCACCACCATGATGAGCTGTTGCTGATGTTGTACTTATATTTCCGTAGGTGAC CGAGGTAGTAAGCATTTTATGCTACTAGCTGCTAGTTGCTTAACATTTAGCCGACACAAGCCGAGTAGGGCGAGT GGGAGTGGGGAGTAGGTGTAATCGTGGGATAGATAGCAGTACTATATCCGAAGTCGGGGAAGATGAGAAGCGGAG GGGATCCGCCCGCCTGAAAACCGAATCTCCCCGCGGCAGATTACGATTTTATCGCCTCAAGAGTGGAATCTTCTA CCCGCTCCACTTACACTCGCCGGAACTACAATCGTTCCATCTCCCTGTCAGATTACTGGCTAGCATTCTGCACGA CTGCAATTGGTGTGGGATATCTGCATAGCATTGATCAAAAACTGGTATTTCCTTTCGAGAAAAGAAAAATAAACG AGACTCATTACGACCTCTCAAAACTGTTAGAGAGGAATTTTGACTGACGTGCGATTGGCGTATGTGTTCCACCAG GTGTAA |