© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g3273.t1 |
| Gene name | |
| Location | scaffold_014:503638..504436 |
| Strand | + |
| Gene length (bp) | 798 |
| Transcript length (bp) | 798 |
| Coding sequence length (bp) | 798 |
| Protein length (aa) | 266 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13561 | adh_short_C2 | Enoyl-(Acyl carrier protein) reductase | 8.1E-45 | 20 | 262 |
| PF00106 | adh_short | short chain dehydrogenase | 3.1E-38 | 12 | 214 |
| PF08659 | KR | KR domain | 4.6E-09 | 12 | 128 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 40 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 13 | 32 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g3273.t1 MTLTTDYHSGKAYVVTGGCSGIGLAILHYLLARSAIVHVLDISSTPPQVPSHLPHKNLHFYPNTDVTSGSIVRNV FTQIRTITPTIHGLINNAGIAYQPVVTGLESDELFDRVMDVNVRGVWNVGNAYLSHILSREADEQPNPAAAKEGR GVIVNLCSIASFRGNLGYVSYTVSKHAVLGMTRAWATNFAAQGVRVNGVAPGGTDTPLLQGIMEKDFQEQYESQV PLGKRCARPEEIADAVGFLLGKESSYMTGQVITVDGGRYM* |
| Coding | >Ani_SJS100_1|g3273.t1 ATGACCCTCACTACAGACTACCATTCAGGCAAAGCCTACGTCGTAACCGGCGGCTGCTCAGGCATCGGCCTCGCT ATCCTCCACTACCTCCTCGCACGATCCGCCATCGTCCACGTTCTCGACATCTCCTCCACCCCACCACAAGTCCCC TCCCACCTCCCTCACAAAAACCTGCATTTCTACCCTAATACGGACGTCACCTCCGGCTCTATCGTCCGAAATGTT TTCACACAAATCCGAACCATCACCCCGACAATCCACGGCCTGATCAATAACGCCGGAATTGCCTACCAGCCTGTC GTTACAGGATTAGAATCGGATGAGCTCTTCGACCGAGTCATGGACGTCAATGTCCGCGGCGTATGGAATGTTGGA AATGCATACCTCTCGCACATCCTCTCGAGAGAGGCCGATGAGCAGCCTAACCCGGCGGCAGCCAAAGAAGGAAGG GGGGTGATTGTGAATCTATGCTCCATCGCATCCTTCCGCGGAAATCTGGGGTATGTGTCATACACGGTGAGCAAG CATGCCGTGCTGGGCATGACGAGAGCATGGGCGACGAATTTCGCGGCCCAGGGGGTGAGAGTAAACGGCGTGGCG CCGGGGGGTACGGATACGCCCTTATTACAGGGCATCATGGAGAAGGATTTTCAGGAGCAATACGAGAGCCAGGTG CCATTGGGCAAGAGGTGTGCTAGGCCAGAGGAGATAGCTGATGCGGTTGGGTTCTTGTTGGGGAAGGAGTCGAGC TATATGACGGGGCAGGTGATTACTGTGGATGGGGGGAGATATATGTGA |
| Transcript | >Ani_SJS100_1|g3273.t1 ATGACCCTCACTACAGACTACCATTCAGGCAAAGCCTACGTCGTAACCGGCGGCTGCTCAGGCATCGGCCTCGCT ATCCTCCACTACCTCCTCGCACGATCCGCCATCGTCCACGTTCTCGACATCTCCTCCACCCCACCACAAGTCCCC TCCCACCTCCCTCACAAAAACCTGCATTTCTACCCTAATACGGACGTCACCTCCGGCTCTATCGTCCGAAATGTT TTCACACAAATCCGAACCATCACCCCGACAATCCACGGCCTGATCAATAACGCCGGAATTGCCTACCAGCCTGTC GTTACAGGATTAGAATCGGATGAGCTCTTCGACCGAGTCATGGACGTCAATGTCCGCGGCGTATGGAATGTTGGA AATGCATACCTCTCGCACATCCTCTCGAGAGAGGCCGATGAGCAGCCTAACCCGGCGGCAGCCAAAGAAGGAAGG GGGGTGATTGTGAATCTATGCTCCATCGCATCCTTCCGCGGAAATCTGGGGTATGTGTCATACACGGTGAGCAAG CATGCCGTGCTGGGCATGACGAGAGCATGGGCGACGAATTTCGCGGCCCAGGGGGTGAGAGTAAACGGCGTGGCG CCGGGGGGTACGGATACGCCCTTATTACAGGGCATCATGGAGAAGGATTTTCAGGAGCAATACGAGAGCCAGGTG CCATTGGGCAAGAGGTGTGCTAGGCCAGAGGAGATAGCTGATGCGGTTGGGTTCTTGTTGGGGAAGGAGTCGAGC TATATGACGGGGCAGGTGATTACTGTGGATGGGGGGAGATATATGTGA |
| Gene | >Ani_SJS100_1|g3273.t1 ATGACCCTCACTACAGACTACCATTCAGGCAAAGCCTACGTCGTAACCGGCGGCTGCTCAGGCATCGGCCTCGCT ATCCTCCACTACCTCCTCGCACGATCCGCCATCGTCCACGTTCTCGACATCTCCTCCACCCCACCACAAGTCCCC TCCCACCTCCCTCACAAAAACCTGCATTTCTACCCTAATACGGACGTCACCTCCGGCTCTATCGTCCGAAATGTT TTCACACAAATCCGAACCATCACCCCGACAATCCACGGCCTGATCAATAACGCCGGAATTGCCTACCAGCCTGTC GTTACAGGATTAGAATCGGATGAGCTCTTCGACCGAGTCATGGACGTCAATGTCCGCGGCGTATGGAATGTTGGA AATGCATACCTCTCGCACATCCTCTCGAGAGAGGCCGATGAGCAGCCTAACCCGGCGGCAGCCAAAGAAGGAAGG GGGGTGATTGTGAATCTATGCTCCATCGCATCCTTCCGCGGAAATCTGGGGTATGTGTCATACACGGTGAGCAAG CATGCCGTGCTGGGCATGACGAGAGCATGGGCGACGAATTTCGCGGCCCAGGGGGTGAGAGTAAACGGCGTGGCG CCGGGGGGTACGGATACGCCCTTATTACAGGGCATCATGGAGAAGGATTTTCAGGAGCAATACGAGAGCCAGGTG CCATTGGGCAAGAGGTGTGCTAGGCCAGAGGAGATAGCTGATGCGGTTGGGTTCTTGTTGGGGAAGGAGTCGAGC TATATGACGGGGCAGGTGATTACTGTGGATGGGGGGAGATATATGTGA |