Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g3261.t1
Gene name
Locationscaffold_014:463114..463695
Strand+
Gene length (bp)581
Transcript length (bp)321
Coding sequence length (bp)321
Protein length (aa) 107

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01248 Ribosomal_L7Ae Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 5.9E-25 11 103

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g3261.t1
MAPKSKKTGDTINSRLALVMKSGKVTLGYKSTIKTLRSGKAKLVIIAANTPPLRKSELEYYAMLAKAPVHHFSGN
NIELGTACGKLFRTSTMAILDAGDSDILSSQ*
Coding >Ani_SJS100_1|g3261.t1
ATGGCCCCCAAGAGCAAGAAGACCGGTGACACCATCAACTCGCGCCTGGCGCTTGTGATGAAGTCCGGAAAGGTC
ACCCTCGGCTACAAGTCCACCATCAAGACCCTCCGCTCCGGCAAGGCCAAGCTGGTCATCATCGCCGCCAACACT
CCTCCTCTTCGCAAGAGTGAGCTTGAGTACTACGCCATGCTCGCCAAGGCCCCCGTCCACCACTTCTCCGGCAAC
AACATCGAGCTCGGTACCGCCTGCGGTAAGCTCTTCCGCACCTCCACCATGGCTATCCTCGATGCTGGTGACTCC
GACATCCTGTCCAGCCAGTAG
Transcript >Ani_SJS100_1|g3261.t1
ATGGCCCCCAAGAGCAAGAAGACCGGTGACACCATCAACTCGCGCCTGGCGCTTGTGATGAAGTCCGGAAAGGTC
ACCCTCGGCTACAAGTCCACCATCAAGACCCTCCGCTCCGGCAAGGCCAAGCTGGTCATCATCGCCGCCAACACT
CCTCCTCTTCGCAAGAGTGAGCTTGAGTACTACGCCATGCTCGCCAAGGCCCCCGTCCACCACTTCTCCGGCAAC
AACATCGAGCTCGGTACCGCCTGCGGTAAGCTCTTCCGCACCTCCACCATGGCTATCCTCGATGCTGGTGACTCC
GACATCCTGTCCAGCCAGTAG
Gene >Ani_SJS100_1|g3261.t1
ATGGCCCCCAAGAGCAAGAAGACCGGTGACACCATCAACTCGCGCCTGGCGCTTGTGATGAAGTCCGGAAAGGGT
ATGTTATACCAGAATTTGCCAGTTCAGACATTTTAGACAGTCTCTAATCGAGCCCATCTAGTCACCCTCGGCTAC
AAGTCCACCATCAAGACCCTCCGCGTGAGTATACCGGATAATTCAGGCAATAGCCGTGCAGAACATCCGTGAATG
GTCGACTAATAACGTCAACAGTCCGGCAAGGCCAAGCTGGTCATCATCGCCGCCAACACTCCTCCTCTTCGCAAG
AGTGAGCTTGAGTACTACGCCATGCTCGCCAAGGCCCCCGTCCACCACTTCTCCGGCAACAACGTGAGTGACTGC
GATCAGATCTTTGGCATCTCTATGGAGTGGGGTCCGGACCTAGTTCTGGATAGACTACTTCCGTAGTGATCGCAA
CGTAAAACTGGAGTAAACGCTAACATTATGGTGAACAGATCGAGCTCGGTACCGCCTGCGGTAAGCTCTTCCGCA
CCTCCACCATGGCTATCCTCGATGCTGGTGACTCCGACATCCTGTCCAGCCAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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