© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g3205.t1 |
| Gene name | |
| Location | scaffold_014:296127..298065 |
| Strand | + |
| Gene length (bp) | 1938 |
| Transcript length (bp) | 1866 |
| Coding sequence length (bp) | 1866 |
| Protein length (aa) | 622 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00246 | Peptidase_M14 | Zinc carboxypeptidase | 2.6E-75 | 208 | 509 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004181 | metallocarboxypeptidase activity | Yes |
| GO:0006508 | proteolysis | Yes |
| GO:0008270 | zinc ion binding | Yes |
| GO:0008237 | metallopeptidase activity | No |
| GO:0008235 | metalloexopeptidase activity | No |
| GO:0043167 | ion binding | No |
| GO:0140096 | catalytic activity, acting on a protein | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0019538 | protein metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:0016787 | hydrolase activity | No |
| GO:0008152 | metabolic process | No |
| GO:0043169 | cation binding | No |
| GO:0008233 | peptidase activity | No |
| GO:0046914 | transition metal ion binding | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0008238 | exopeptidase activity | No |
| GO:0004180 | carboxypeptidase activity | No |
| GO:0008150 | biological_process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0046872 | metal ion binding | No |
| GO:0005488 | binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 21 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g3205.t1 MRHLLSLLVLLIASAALVSAVPAGSIITPQPPVEPVHLLSSQPSDPRRPWIRLRDWIIESIWGIEKPASRRFPLN DSPRNRSPPSRILARYGSDVVLRFSLRNHDEAEALAQAADILFLDVWASTPAFVDIRLAEEVIPSLLGLLPNSLQ TAYTPLIDNLAERIYTTYPSKKPIGLEGQSGFASSSRPAPKFGDLFFHEYQPLSVIIPWMRLLASMFPSHVRMIS VGVSYEGREIPALRLSAGSSTAASGPRKTIIVTGGSHAREWIGTSTVNHVMYTLITKYGKSKAVTRLLQDFDWIM IPTINPDGYVYTWETDRLWRKNRQRTSLRFCPGIDLDRAWGFEWDGGRTRANPCSENYAGDEPFEGMEAQQLAQW ALNETQNNNADIVSFLDLHSYSQTILYPFSYSCSSIPPTLESLEELGLGLAKAIRYATHEIYDVTSACEGIVTAS AADNNPGRFFPIGGNSGGSALDWFYHQVHATYSYQIKLRDRGSYGFLLPSEHIIPTGKEIYNVVLKLGSFLIGGD SFDVDWESELFDLSKDESDLDSRYSKSNDRSPAYLHNANGPLPNIDEDEDKEWVMVEEEDYTDDDDDDDDDDEEE EEEEEDTYWATEHTYEFRRRR* |
| Coding | >Ani_SJS100_1|g3205.t1 ATGCGTCACCTCTTATCACTGCTGGTGCTTCTGATCGCATCGGCCGCCCTGGTCTCCGCCGTCCCCGCCGGCTCC ATTATCACTCCACAACCACCCGTCGAGCCCGTTCACCTTCTCTCTTCCCAGCCCTCTGATCCCCGAAGGCCATGG ATCCGCCTCCGTGACTGGATCATCGAGTCCATATGGGGCATCGAAAAACCCGCATCTCGTCGATTCCCACTCAAC GATTCCCCGCGCAATCGCTCTCCTCCCTCCCGGATTCTGGCGCGCTACGGTAGTGACGTCGTACTTCGTTTCAGC CTGCGCAATCACGATGAGGCCGAGGCATTGGCCCAGGCTGCAGACATTCTATTCCTGGACGTATGGGCGTCTACT CCAGCATTCGTAGATATCCGACTGGCCGAGGAAGTCATTCCCTCATTATTGGGCTTGCTACCAAATTCCCTCCAG ACCGCATATACTCCCCTAATAGACAACCTGGCAGAGAGAATCTATACGACCTATCCATCTAAAAAGCCGATAGGA CTTGAAGGACAATCTGGATTTGCGTCCTCGAGTCGACCTGCGCCAAAGTTCGGTGACCTTTTTTTCCACGAGTAT CAGCCTTTGTCCGTCATTATCCCCTGGATGCGGCTGCTGGCTTCCATGTTTCCATCCCATGTGCGCATGATTAGC GTTGGAGTATCTTACGAGGGTCGCGAAATTCCCGCCCTCCGACTGAGCGCAGGCAGCTCCACCGCGGCGTCAGGC CCTCGTAAAACAATCATCGTTACGGGTGGTAGCCATGCCCGCGAATGGATTGGCACCTCAACCGTGAACCATGTA ATGTACACGCTCATTACCAAGTATGGCAAATCCAAGGCCGTTACCCGCCTTCTACAGGACTTCGACTGGATCATG ATCCCCACGATCAATCCCGACGGCTATGTTTATACCTGGGAGACGGACCGACTATGGCGCAAGAATCGACAGCGG ACCAGCCTACGCTTCTGTCCCGGAATCGATCTTGACCGCGCCTGGGGCTTCGAATGGGACGGCGGTCGGACCCGC GCTAACCCTTGTTCAGAAAACTATGCTGGAGACGAGCCCTTCGAGGGAATGGAAGCACAACAATTAGCACAGTGG GCGCTCAACGAGACACAAAACAACAATGCCGACATCGTGAGCTTCCTTGACCTTCACTCTTACTCTCAAACAATT CTCTACCCCTTCTCCTACTCCTGCTCCTCGATCCCTCCAACGCTCGAGAGCCTGGAAGAGCTAGGCCTTGGCCTA GCCAAGGCCATTCGGTACGCGACTCACGAAATCTACGATGTCACTTCTGCCTGCGAAGGCATCGTCACGGCCAGT GCGGCAGATAACAACCCCGGGCGGTTCTTCCCCATTGGTGGCAACTCCGGTGGCAGTGCGTTGGACTGGTTTTAC CACCAAGTGCACGCGACTTATTCATACCAGATCAAGCTTCGTGATCGCGGAAGCTACGGGTTCCTCCTTCCGTCT GAACACATCATCCCCACCGGCAAGGAGATCTACAATGTTGTTCTGAAATTGGGATCCTTCCTCATCGGAGGCGAC TCATTTGACGTCGATTGGGAATCAGAACTCTTCGATCTGTCAAAGGACGAATCCGATCTGGATAGCCGCTATTCA AAATCCAATGACCGCTCCCCGGCGTATCTACACAACGCCAACGGCCCCCTGCCCAACATTGACGAAGACGAAGAT AAGGAATGGGTAATGGTGGAGGAAGAAGACTACACAGACGATGACGACGACGATGATGATGATGATGAAGAAGAG GAAGAGGAAGAGGAAGATACATATTGGGCCACCGAACACACATACGAATTTCGGCGACGACGCTGA |
| Transcript | >Ani_SJS100_1|g3205.t1 ATGCGTCACCTCTTATCACTGCTGGTGCTTCTGATCGCATCGGCCGCCCTGGTCTCCGCCGTCCCCGCCGGCTCC ATTATCACTCCACAACCACCCGTCGAGCCCGTTCACCTTCTCTCTTCCCAGCCCTCTGATCCCCGAAGGCCATGG ATCCGCCTCCGTGACTGGATCATCGAGTCCATATGGGGCATCGAAAAACCCGCATCTCGTCGATTCCCACTCAAC GATTCCCCGCGCAATCGCTCTCCTCCCTCCCGGATTCTGGCGCGCTACGGTAGTGACGTCGTACTTCGTTTCAGC CTGCGCAATCACGATGAGGCCGAGGCATTGGCCCAGGCTGCAGACATTCTATTCCTGGACGTATGGGCGTCTACT CCAGCATTCGTAGATATCCGACTGGCCGAGGAAGTCATTCCCTCATTATTGGGCTTGCTACCAAATTCCCTCCAG ACCGCATATACTCCCCTAATAGACAACCTGGCAGAGAGAATCTATACGACCTATCCATCTAAAAAGCCGATAGGA CTTGAAGGACAATCTGGATTTGCGTCCTCGAGTCGACCTGCGCCAAAGTTCGGTGACCTTTTTTTCCACGAGTAT CAGCCTTTGTCCGTCATTATCCCCTGGATGCGGCTGCTGGCTTCCATGTTTCCATCCCATGTGCGCATGATTAGC GTTGGAGTATCTTACGAGGGTCGCGAAATTCCCGCCCTCCGACTGAGCGCAGGCAGCTCCACCGCGGCGTCAGGC CCTCGTAAAACAATCATCGTTACGGGTGGTAGCCATGCCCGCGAATGGATTGGCACCTCAACCGTGAACCATGTA ATGTACACGCTCATTACCAAGTATGGCAAATCCAAGGCCGTTACCCGCCTTCTACAGGACTTCGACTGGATCATG ATCCCCACGATCAATCCCGACGGCTATGTTTATACCTGGGAGACGGACCGACTATGGCGCAAGAATCGACAGCGG ACCAGCCTACGCTTCTGTCCCGGAATCGATCTTGACCGCGCCTGGGGCTTCGAATGGGACGGCGGTCGGACCCGC GCTAACCCTTGTTCAGAAAACTATGCTGGAGACGAGCCCTTCGAGGGAATGGAAGCACAACAATTAGCACAGTGG GCGCTCAACGAGACACAAAACAACAATGCCGACATCGTGAGCTTCCTTGACCTTCACTCTTACTCTCAAACAATT CTCTACCCCTTCTCCTACTCCTGCTCCTCGATCCCTCCAACGCTCGAGAGCCTGGAAGAGCTAGGCCTTGGCCTA GCCAAGGCCATTCGGTACGCGACTCACGAAATCTACGATGTCACTTCTGCCTGCGAAGGCATCGTCACGGCCAGT GCGGCAGATAACAACCCCGGGCGGTTCTTCCCCATTGGTGGCAACTCCGGTGGCAGTGCGTTGGACTGGTTTTAC CACCAAGTGCACGCGACTTATTCATACCAGATCAAGCTTCGTGATCGCGGAAGCTACGGGTTCCTCCTTCCGTCT GAACACATCATCCCCACCGGCAAGGAGATCTACAATGTTGTTCTGAAATTGGGATCCTTCCTCATCGGAGGCGAC TCATTTGACGTCGATTGGGAATCAGAACTCTTCGATCTGTCAAAGGACGAATCCGATCTGGATAGCCGCTATTCA AAATCCAATGACCGCTCCCCGGCGTATCTACACAACGCCAACGGCCCCCTGCCCAACATTGACGAAGACGAAGAT AAGGAATGGGTAATGGTGGAGGAAGAAGACTACACAGACGATGACGACGACGATGATGATGATGATGAAGAAGAG GAAGAGGAAGAGGAAGATACATATTGGGCCACCGAACACACATACGAATTTCGGCGACGACGCTGA |
| Gene | >Ani_SJS100_1|g3205.t1 ATGCGTCACCTCTTATCACTGCTGGTGCTTCTGATCGCATCGGCCGCCCTGGTCTCCGCCGTCCCCGCCGGCTCC ATTATCACTCCACAACCACCCGTCGAGCCCGTTCACCTTCTCTCTTCCCAGCCCTCTGATCCCCGAAGGCCATGG ATCCGCCTCCGTGACTGGATCATCGAGTCCATATGGGGCATCGAAAAACCCGCATCTCGTCGATTCCCACTCAAC GATTCCCCGCGCAATCGCTCTCCTCCCTCCCGGATTCTGGCGCGCTACGGTAGTGACGTCGTACTTCGTTTCAGC CTGCGCAATCACGATGAGGCCGAGGCATTGGCCCAGGCTGCAGACATTCTATTCCTGGACGTATGGGCGTCTACT CCAGCATTCGTAGATATCCGACTGGCCGAGGAAGTCGTAAGTGGTTCATCCTTCCGTCCATATCTGCCCGGTTGA CTGATGCCTGATCCACTGTGACCCTCGCAACAGATTCCCTCATTATTGGGCTTGCTACCAAATTCCCTCCAGACC GCATATACTCCCCTAATAGACAACCTGGCAGAGAGAATCTATACGACCTATCCATCTAAAAAGCCGATAGGACTT GAAGGACAATCTGGATTTGCGTCCTCGAGTCGACCTGCGCCAAAGTTCGGTGACCTTTTTTTCCACGAGTATCAG CCTTTGTCCGTCATTATCCCCTGGATGCGGCTGCTGGCTTCCATGTTTCCATCCCATGTGCGCATGATTAGCGTT GGAGTATCTTACGAGGGTCGCGAAATTCCCGCCCTCCGACTGAGCGCAGGCAGCTCCACCGCGGCGTCAGGCCCT CGTAAAACAATCATCGTTACGGGTGGTAGCCATGCCCGCGAATGGATTGGCACCTCAACCGTGAACCATGTAATG TACACGCTCATTACCAAGTATGGCAAATCCAAGGCCGTTACCCGCCTTCTACAGGACTTCGACTGGATCATGATC CCCACGATCAATCCCGACGGCTATGTTTATACCTGGGAGACGGACCGACTATGGCGCAAGAATCGACAGCGGACC AGCCTACGCTTCTGTCCCGGAATCGATCTTGACCGCGCCTGGGGCTTCGAATGGGACGGCGGTCGGACCCGCGCT AACCCTTGTTCAGAAAACTATGCTGGAGACGAGCCCTTCGAGGGAATGGAAGCACAACAATTAGCACAGTGGGCG CTCAACGAGACACAAAACAACAATGCCGACATCGTGAGCTTCCTTGACCTTCACTCTTACTCTCAAACAATTCTC TACCCCTTCTCCTACTCCTGCTCCTCGATCCCTCCAACGCTCGAGAGCCTGGAAGAGCTAGGCCTTGGCCTAGCC AAGGCCATTCGGTACGCGACTCACGAAATCTACGATGTCACTTCTGCCTGCGAAGGCATCGTCACGGCCAGTGCG GCAGATAACAACCCCGGGCGGTTCTTCCCCATTGGTGGCAACTCCGGTGGCAGTGCGTTGGACTGGTTTTACCAC CAAGTGCACGCGACTTATTCATACCAGATCAAGCTTCGTGATCGCGGAAGCTACGGGTTCCTCCTTCCGTCTGAA CACATCATCCCCACCGGCAAGGAGATCTACAATGTTGTTCTGAAATTGGGATCCTTCCTCATCGGAGGCGACTCA TTTGACGTCGATTGGGAATCAGAACTCTTCGATCTGTCAAAGGACGAATCCGATCTGGATAGCCGCTATTCAAAA TCCAATGACCGCTCCCCGGCGTATCTACACAACGCCAACGGCCCCCTGCCCAACATTGACGAAGACGAAGATAAG GAATGGGTAATGGTGGAGGAAGAAGACTACACAGACGATGACGACGACGATGATGATGATGATGAAGAAGAGGAA GAGGAAGAGGAAGATACATATTGGGCCACCGAACACACATACGAATTTCGGCGACGACGCTGA |