Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g3202.t1
Gene name
Locationscaffold_014:282611..283891
Strand-
Gene length (bp)1280
Transcript length (bp)1158
Coding sequence length (bp)1158
Protein length (aa) 386

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13445 zf-RING_UBOX RING-type zinc-finger 7.2E-06 265 298

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g3202.t1
MAHSKRNTSLPHFTSYERDLLKSSWGTKRGVIGRDSFLPFGSCRLCLHPAREPVVACATNGDLFCRECAISDLLA
QRQEIKRLEKERDEAKKRLAEEEERALDEARTRELRDFELVSMGLDAAAKKNNGSSQSQNDESSKKRKADTTEAL
AAFKAREVEVDGKRKKVFELDDKEMARIAREEQERLKNELKKEKESNKSALPSFWVPSLTPTTDPNEIAANKAIK
LTPICPASTDSNRHSYSLKSLVEVHFTEEKASDGSPARVCPSCKKTLTNGLKAMLTKPCGHVICQPCVNKFMTPH
DAPDPHASKEEQEQTAALHGRILCYVCETDVTPSKDSNKDSGSGKKKKKDKEGIRPGLVEVSSEGTGFAGRGGNV
ATKSGVAFQC*
Coding >Ani_SJS100_1|g3202.t1
ATGGCGCACTCTAAACGCAACACCTCCCTTCCTCATTTTACCTCCTACGAGCGCGATCTTCTCAAGTCAAGCTGG
GGCACCAAACGCGGAGTCATCGGCCGCGACTCTTTCCTCCCATTCGGCTCGTGTCGACTTTGCCTACACCCGGCG
CGGGAACCCGTCGTCGCCTGCGCCACCAACGGTGATCTCTTCTGTCGCGAATGCGCCATTAGTGACCTTCTCGCC
CAGCGACAGGAAATCAAGCGTCTCGAAAAGGAACGCGATGAAGCCAAAAAGCGTCTTGCAGAGGAGGAGGAGCGG
GCATTAGATGAAGCGCGAACGCGGGAACTCCGTGATTTCGAACTCGTGAGCATGGGGTTAGATGCAGCAGCGAAG
AAGAACAACGGGTCAAGCCAATCACAGAATGATGAGAGCTCAAAGAAACGCAAAGCAGATACCACAGAGGCATTG
GCTGCTTTCAAGGCGCGAGAGGTAGAGGTGGACGGGAAGCGGAAGAAGGTGTTTGAATTAGATGATAAAGAGATG
GCTAGGATCGCGCGCGAGGAGCAAGAACGGTTGAAAAATGAGCTGAAGAAGGAAAAGGAATCAAACAAATCAGCC
CTCCCATCCTTCTGGGTCCCCTCGCTCACACCCACCACCGACCCGAACGAAATCGCCGCCAACAAAGCCATTAAA
CTAACCCCCATTTGTCCCGCTTCCACCGACTCCAACCGCCACAGCTACTCCCTCAAATCCTTAGTTGAGGTGCAT
TTCACCGAAGAAAAGGCCTCCGATGGCTCCCCGGCCCGTGTCTGCCCAAGCTGCAAGAAAACACTGACAAATGGG
CTCAAAGCAATGTTAACGAAACCCTGCGGCCACGTCATCTGCCAACCATGCGTCAACAAATTCATGACTCCGCAC
GATGCGCCGGACCCGCACGCCTCCAAAGAAGAGCAGGAGCAGACCGCTGCCCTGCATGGACGGATTCTATGCTAT
GTTTGCGAGACGGATGTCACGCCGTCAAAGGACAGTAACAAGGATTCCGGTTCGGGGAAGAAGAAAAAGAAGGAC
AAGGAGGGGATTCGCCCTGGTTTGGTGGAGGTGAGCTCGGAGGGGACAGGGTTTGCGGGGAGAGGGGGGAATGTC
GCGACTAAGTCGGGGGTTGCGTTTCAGTGTTGA
Transcript >Ani_SJS100_1|g3202.t1
ATGGCGCACTCTAAACGCAACACCTCCCTTCCTCATTTTACCTCCTACGAGCGCGATCTTCTCAAGTCAAGCTGG
GGCACCAAACGCGGAGTCATCGGCCGCGACTCTTTCCTCCCATTCGGCTCGTGTCGACTTTGCCTACACCCGGCG
CGGGAACCCGTCGTCGCCTGCGCCACCAACGGTGATCTCTTCTGTCGCGAATGCGCCATTAGTGACCTTCTCGCC
CAGCGACAGGAAATCAAGCGTCTCGAAAAGGAACGCGATGAAGCCAAAAAGCGTCTTGCAGAGGAGGAGGAGCGG
GCATTAGATGAAGCGCGAACGCGGGAACTCCGTGATTTCGAACTCGTGAGCATGGGGTTAGATGCAGCAGCGAAG
AAGAACAACGGGTCAAGCCAATCACAGAATGATGAGAGCTCAAAGAAACGCAAAGCAGATACCACAGAGGCATTG
GCTGCTTTCAAGGCGCGAGAGGTAGAGGTGGACGGGAAGCGGAAGAAGGTGTTTGAATTAGATGATAAAGAGATG
GCTAGGATCGCGCGCGAGGAGCAAGAACGGTTGAAAAATGAGCTGAAGAAGGAAAAGGAATCAAACAAATCAGCC
CTCCCATCCTTCTGGGTCCCCTCGCTCACACCCACCACCGACCCGAACGAAATCGCCGCCAACAAAGCCATTAAA
CTAACCCCCATTTGTCCCGCTTCCACCGACTCCAACCGCCACAGCTACTCCCTCAAATCCTTAGTTGAGGTGCAT
TTCACCGAAGAAAAGGCCTCCGATGGCTCCCCGGCCCGTGTCTGCCCAAGCTGCAAGAAAACACTGACAAATGGG
CTCAAAGCAATGTTAACGAAACCCTGCGGCCACGTCATCTGCCAACCATGCGTCAACAAATTCATGACTCCGCAC
GATGCGCCGGACCCGCACGCCTCCAAAGAAGAGCAGGAGCAGACCGCTGCCCTGCATGGACGGATTCTATGCTAT
GTTTGCGAGACGGATGTCACGCCGTCAAAGGACAGTAACAAGGATTCCGGTTCGGGGAAGAAGAAAAAGAAGGAC
AAGGAGGGGATTCGCCCTGGTTTGGTGGAGGTGAGCTCGGAGGGGACAGGGTTTGCGGGGAGAGGGGGGAATGTC
GCGACTAAGTCGGGGGTTGCGTTTCAGTGTTGA
Gene >Ani_SJS100_1|g3202.t1
ATGGCGCACTCTAAACGCAACACCTCCCTTCCTCATTTTACCTCCTACGAGCGCGATCTTCTCAAGTCAAGCTGG
GGCACCAAACGCGGAGTCATCGGCCGCGACTCTTTCCTCCCATTCGGCTCGTGTCGACTTTGCCTACACCCGGCG
CGGGAACCCGTCGTCGCCTGCGCCACCAACGGTGATCTCTTCTGTCGCGAATGCGCCATTAGTGACCTTCTCGCC
CAGCGACAGGAAATCAAGCGTCTCGAAAAGGAACGCGATGAAGCCAAAAAGCGTCTTGCAGAGGAGGAGGAGCGG
GCATTAGATGAAGCGCGAACGCGGGAACTCCGTGATTTCGAACTCGTGAGCATGGGGTTAGATGCAGCAGCGAAG
AAGAACAACGGGTCAAGCCAATCACAGAATGATGAGAGCTCAAAGAAACGCAAAGCAGATACCACAGAGGCATTG
GCTGCTTTCAAGGCGCGAGAGGTAGAGGTGGACGGGAAGCGGAAGAAGGTGTTTGAATTAGATGATAAAGAGATG
GCTAGGATCGCGCGCGAGGAGCAAGAACGGTTGAAAAATGAGCTGAAGAAGGAAAAGGTCTAAGACCATTGTCAA
TCCCCTTGGTAAGCAGCTCGCTGACAATCTCCAGGAATCAAACAAATCAGCCCTCCCATCCTTCTGGGTCCCCTC
GCTCACACCCACCACCGACCCGAACGAAATCGCCGCCAACAAAGCCATTAAACTAACCCCCATTTGTCCCGCTTC
CACCGACTCCAACCGCCACAGCTACTCCCTCAAATCCTTAGTTGAGGTGCATTTCACCGAAGAAAAGGCCTCCGA
TGGCTCCCCGGCCCGTGTCTGCCCAAGCTGCAAGAAAACACTGACAAATGGGCTCAAAGCAATGTGTATGTTTTA
CCTACTTACCCACCGCATATGTCCTCAACGCACCTACTAATACTGTGCTGCTACATCAAGTAACGAAACCCTGCG
GCCACGTCATCTGCCAACCATGCGTCAACAAATTCATGACTCCGCACGATGCGCCGGACCCGCACGCCTCCAAAG
AAGAGCAGGAGCAGACCGCTGCCCTGCATGGACGGATTCTATGCTATGTTTGCGAGACGGATGTCACGCCGTCAA
AGGACAGTAACAAGGATTCCGGTTCGGGGAAGAAGAAAAAGAAGGACAAGGAGGGGATTCGCCCTGGTTTGGTGG
AGGTGAGCTCGGAGGGGACAGGGTTTGCGGGGAGAGGGGGGAATGTCGCGACTAAGTCGGGGGTTGCGTTTCAGT
GTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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