© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g3147.t1 |
| Gene name | |
| Location | scaffold_014:122394..123729 |
| Strand | - |
| Gene length (bp) | 1335 |
| Transcript length (bp) | 1263 |
| Coding sequence length (bp) | 1263 |
| Protein length (aa) | 421 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00226 | DnaJ | DnaJ domain | 1.4E-24 | 27 | 89 |
| PF01556 | DnaJ_C | DnaJ C terminal domain | 3.3E-23 | 136 | 377 |
| PF00684 | DnaJ_CXXCXGXG | DnaJ central domain | 2.1E-18 | 162 | 225 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0051082 | unfolded protein binding | Yes |
| GO:0031072 | heat shock protein binding | Yes |
| GO:0005515 | protein binding | No |
| GO:0005488 | binding | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 25 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 24 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g3147.t1 MFPTMRTVALFVVLTICLIQLVLAAEDYYKILGLDKSASEKDIKRAYRHLSKKFHPDKNPGDETAQKRFVEIAEA YDVLSTSSTRKIYDQYGHEGLEQHRQGGRQSHDPFDLFSRFFGGGGHFGHAPGHRRGPDMELRVGLPLRDFYNGR EFSFGVEKQQICDACEGTGSADREVVTCDKCSGRGIVIQKHQLAPGMFQQVQMHCDKCGGQGKMIKKPCPVCHGH RVVRREVETHATVEPGMDKGMRLVYENEADESPDWIAGDLVLILEEKEPELGDAEEHRTDGTFFRRKGKDLFWKE ALSLREAWMGEWTRNITHLDGHVVQLGRKRGEVVQPLSVETIKGEGMPHYSDGHLHDNEDEDEEPGNLYVEYAVI LPDEMESGMEKDFFALWEKWRKKNGVDLGRDSGRPMPPPPVKDEL* |
| Coding | >Ani_SJS100_1|g3147.t1 ATGTTCCCCACCATGCGAACCGTGGCCCTCTTCGTGGTCCTCACCATCTGTCTCATCCAATTGGTCCTCGCCGCA GAAGACTACTACAAGATCCTGGGACTGGATAAATCCGCCTCGGAGAAGGACATTAAACGCGCATACAGACATCTG AGCAAGAAGTTCCATCCGGATAAGAACCCAGGCGACGAAACGGCCCAAAAGAGATTCGTCGAAATCGCCGAAGCC TACGACGTCCTCTCCACCTCCTCGACACGCAAGATCTACGACCAATACGGCCACGAAGGACTCGAGCAGCACCGT CAAGGCGGCCGACAATCGCACGACCCGTTCGACCTATTCTCGAGATTCTTCGGCGGCGGAGGCCACTTCGGCCAT GCGCCGGGACATCGCAGAGGACCGGACATGGAGCTCCGGGTCGGGTTACCGCTAAGGGATTTCTACAATGGACGG GAATTCTCGTTCGGTGTGGAGAAGCAGCAGATCTGTGATGCCTGTGAGGGCACAGGGTCCGCGGACCGGGAGGTA GTCACCTGCGATAAGTGTTCTGGACGCGGAATAGTCATCCAGAAGCATCAGTTAGCGCCGGGCATGTTCCAGCAG GTGCAGATGCATTGTGATAAGTGTGGCGGACAGGGCAAGATGATCAAGAAGCCGTGTCCCGTATGTCATGGACAT CGGGTTGTTCGCCGCGAGGTCGAGACGCACGCGACTGTCGAGCCGGGGATGGATAAGGGGATGCGGCTGGTATAC GAGAACGAGGCGGACGAGAGTCCGGACTGGATCGCGGGCGACTTGGTGCTGATTCTTGAGGAGAAGGAGCCGGAG CTGGGCGACGCCGAGGAACATCGTACGGATGGGACGTTTTTCCGGCGGAAGGGCAAGGATCTGTTTTGGAAGGAG GCGCTGTCGCTGCGCGAGGCGTGGATGGGCGAGTGGACGCGCAATATCACGCATTTGGATGGTCATGTGGTTCAG TTGGGGAGGAAGCGTGGGGAGGTCGTGCAGCCGTTGTCGGTTGAGACGATTAAGGGCGAGGGTATGCCGCATTAC TCGGATGGGCATCTTCATGATAATGAAGATGAGGATGAGGAGCCTGGGAACTTGTATGTGGAGTATGCCGTTATT CTGCCGGATGAGATGGAGAGCGGCATGGAGAAGGACTTCTTTGCGCTGTGGGAGAAGTGGCGCAAGAAGAACGGG GTTGATTTGGGTCGCGATAGTGGTCGGCCTATGCCTCCTCCGCCGGTGAAGGACGAGTTATGA |
| Transcript | >Ani_SJS100_1|g3147.t1 ATGTTCCCCACCATGCGAACCGTGGCCCTCTTCGTGGTCCTCACCATCTGTCTCATCCAATTGGTCCTCGCCGCA GAAGACTACTACAAGATCCTGGGACTGGATAAATCCGCCTCGGAGAAGGACATTAAACGCGCATACAGACATCTG AGCAAGAAGTTCCATCCGGATAAGAACCCAGGCGACGAAACGGCCCAAAAGAGATTCGTCGAAATCGCCGAAGCC TACGACGTCCTCTCCACCTCCTCGACACGCAAGATCTACGACCAATACGGCCACGAAGGACTCGAGCAGCACCGT CAAGGCGGCCGACAATCGCACGACCCGTTCGACCTATTCTCGAGATTCTTCGGCGGCGGAGGCCACTTCGGCCAT GCGCCGGGACATCGCAGAGGACCGGACATGGAGCTCCGGGTCGGGTTACCGCTAAGGGATTTCTACAATGGACGG GAATTCTCGTTCGGTGTGGAGAAGCAGCAGATCTGTGATGCCTGTGAGGGCACAGGGTCCGCGGACCGGGAGGTA GTCACCTGCGATAAGTGTTCTGGACGCGGAATAGTCATCCAGAAGCATCAGTTAGCGCCGGGCATGTTCCAGCAG GTGCAGATGCATTGTGATAAGTGTGGCGGACAGGGCAAGATGATCAAGAAGCCGTGTCCCGTATGTCATGGACAT CGGGTTGTTCGCCGCGAGGTCGAGACGCACGCGACTGTCGAGCCGGGGATGGATAAGGGGATGCGGCTGGTATAC GAGAACGAGGCGGACGAGAGTCCGGACTGGATCGCGGGCGACTTGGTGCTGATTCTTGAGGAGAAGGAGCCGGAG CTGGGCGACGCCGAGGAACATCGTACGGATGGGACGTTTTTCCGGCGGAAGGGCAAGGATCTGTTTTGGAAGGAG GCGCTGTCGCTGCGCGAGGCGTGGATGGGCGAGTGGACGCGCAATATCACGCATTTGGATGGTCATGTGGTTCAG TTGGGGAGGAAGCGTGGGGAGGTCGTGCAGCCGTTGTCGGTTGAGACGATTAAGGGCGAGGGTATGCCGCATTAC TCGGATGGGCATCTTCATGATAATGAAGATGAGGATGAGGAGCCTGGGAACTTGTATGTGGAGTATGCCGTTATT CTGCCGGATGAGATGGAGAGCGGCATGGAGAAGGACTTCTTTGCGCTGTGGGAGAAGTGGCGCAAGAAGAACGGG GTTGATTTGGGTCGCGATAGTGGTCGGCCTATGCCTCCTCCGCCGGTGAAGGACGAGTTATGA |
| Gene | >Ani_SJS100_1|g3147.t1 ATGTTCCCCACCATGCGAACCGTGGCCCTCTTCGTGGTCCTCACCATCTGTCTCATCCAATTGGTCCTCGCCGCA GAAGACTACTACAAGATCCTGGGACTGGATAAATCCGCCTCGGAGAAGGACATTAAACGCGCATACAGACATCTG AGCAAGAAGTTCCATCCGGATAAGAACCCGTTCGTTAACTCCCTCTCCCAAATTTCTTTCTTCTTCTGTTGGTGC TAATGCTAGAACATTTGTTAAAATAGAGGCGACGAAACGGCCCAAAAGAGATTCGTCGAAATCGCCGAAGCCTAC GACGTCCTCTCCACCTCCTCGACACGCAAGATCTACGACCAATACGGCCACGAAGGACTCGAGCAGCACCGTCAA GGCGGCCGACAATCGCACGACCCGTTCGACCTATTCTCGAGATTCTTCGGCGGCGGAGGCCACTTCGGCCATGCG CCGGGACATCGCAGAGGACCGGACATGGAGCTCCGGGTCGGGTTACCGCTAAGGGATTTCTACAATGGACGGGAA TTCTCGTTCGGTGTGGAGAAGCAGCAGATCTGTGATGCCTGTGAGGGCACAGGGTCCGCGGACCGGGAGGTAGTC ACCTGCGATAAGTGTTCTGGACGCGGAATAGTCATCCAGAAGCATCAGTTAGCGCCGGGCATGTTCCAGCAGGTG CAGATGCATTGTGATAAGTGTGGCGGACAGGGCAAGATGATCAAGAAGCCGTGTCCCGTATGTCATGGACATCGG GTTGTTCGCCGCGAGGTCGAGACGCACGCGACTGTCGAGCCGGGGATGGATAAGGGGATGCGGCTGGTATACGAG AACGAGGCGGACGAGAGTCCGGACTGGATCGCGGGCGACTTGGTGCTGATTCTTGAGGAGAAGGAGCCGGAGCTG GGCGACGCCGAGGAACATCGTACGGATGGGACGTTTTTCCGGCGGAAGGGCAAGGATCTGTTTTGGAAGGAGGCG CTGTCGCTGCGCGAGGCGTGGATGGGCGAGTGGACGCGCAATATCACGCATTTGGATGGTCATGTGGTTCAGTTG GGGAGGAAGCGTGGGGAGGTCGTGCAGCCGTTGTCGGTTGAGACGATTAAGGGCGAGGGTATGCCGCATTACTCG GATGGGCATCTTCATGATAATGAAGATGAGGATGAGGAGCCTGGGAACTTGTATGTGGAGTATGCCGTTATTCTG CCGGATGAGATGGAGAGCGGCATGGAGAAGGACTTCTTTGCGCTGTGGGAGAAGTGGCGCAAGAAGAACGGGGTT GATTTGGGTCGCGATAGTGGTCGGCCTATGCCTCCTCCGCCGGTGAAGGACGAGTTATGA |