Protein ID | Ani_SJS100_1|g3101.t1 |
Gene name | |
Location | scaffold_013:486139..489501 |
Strand | - |
Gene length (bp) | 3362 |
Transcript length (bp) | 2178 |
Coding sequence length (bp) | 2178 |
Protein length (aa) | 726 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04900 | Fcf1 | Fcf1 | 3.7E-10 | 449 | 537 |
PF04900 | Fcf1 | Fcf1 | 1.5E-05 | 569 | 596 |
GO Term | Description | Terminal node |
---|---|---|
GO:0032040 | small-subunit processome | Yes |
GO:1990904 | ribonucleoprotein complex | No |
GO:0030684 | preribosome | No |
GO:0032991 | protein-containing complex | No |
GO:0005575 | cellular_component | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 27 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g3101.t1 MVPKTVASSTGCLSFIFSSSSPLASPVIRRSPLWSAHSGAPSIWVRRYRAVWPSYGITTPIPDPNPQFPISRSPF CFQTGYALCAKRPSRPFPPPFLSPPSSSFSDPLTTHYLSQDKRLSVRGDLVRGLNNGDDAVLVAENYLAVNDGVG AWATKPRGHAALWSRLLLHFWALEVERDPNGQSELDPIGYLQRAYEETIRATTSPGEWLGTTTSVTALLHWKRDA TGNIRPLLYVTNIGDCKVFVIRPSEKRILFRTKEQWHWFDCPMQLGTNSVDTPRKDAVLSLVDMQEDDLVVAVSD GILDNLWEHEILTIILDSLEKWQQGRHEDKDSEWAPPAVMADEQMVFLARELLKSALEIAQDPFAESPYMEKAVD EGLAVQGGKMDDISVAVDDPTVKMRAKRSKKYRKLMHQYELTFGFREPYQVLVDSNFLRAVHSFKMDLIPALERT LQGKPKPLLTKCSLAAIMASQPINPRTNNPYRPDHLPPPTTLPLRHCSHNADSTPIDEVECLLSLLSPSAESKKN KEHYILATADPHNAKDKSATDNTAAGRKRKRDAEDKAEAALRKSRLLRRQARSIPGVPIVYVKRSVMVLEPMSDP SDAIREGVEKGKFRVGLNDEARKPTTAGDGEKTKKKRDLKKPKGPNPLSVKKPKKRAPEDTPGKAEKPKREAEER PAAEERDGEDGDAAPKAKRRRRHHNRGAGKTDGDEGGAQEAAAPADAMDD* |
Coding | >Ani_SJS100_1|g3101.t1 ATGGTGCCCAAGACTGTTGCTAGTTCGACAGGTTGTTTATCATTCATCTTCTCCTCCTCTTCTCCTCTCGCTTCG CCGGTAATTAGACGCAGCCCACTGTGGAGCGCTCATTCCGGGGCCCCCAGCATTTGGGTGCGACGATATCGCGCC GTCTGGCCTTCCTACGGCATCACCACTCCCATCCCGGATCCTAATCCACAGTTCCCCATCTCCCGTTCGCCTTTC TGCTTCCAGACAGGCTATGCTCTCTGCGCCAAACGGCCCTCGCGTCCCTTCCCCCCACCGTTCCTGTCTCCGCCC TCTTCCTCCTTTTCCGACCCGCTGACCACCCACTACCTGAGTCAGGATAAGAGATTATCCGTCCGGGGGGATCTG GTCCGCGGCCTGAACAACGGCGACGATGCTGTTTTAGTGGCGGAGAATTACCTCGCCGTGAACGATGGGGTCGGG GCGTGGGCAACCAAGCCGAGAGGTCATGCTGCGCTATGGTCTAGACTGCTCCTCCATTTCTGGGCTTTGGAAGTC GAACGAGACCCCAATGGACAGTCCGAATTAGATCCCATCGGCTATCTTCAACGAGCATACGAGGAAACCATCCGG GCAACGACTTCCCCAGGTGAATGGCTGGGAACTACCACATCGGTCACAGCGTTACTGCATTGGAAGCGCGATGCT ACGGGGAACATACGGCCCCTGCTCTACGTGACCAATATAGGTGACTGCAAGGTCTTTGTCATCCGACCTAGCGAG AAGAGAATCCTCTTTCGAACCAAGGAACAATGGCATTGGTTTGACTGTCCTATGCAGCTGGGCACAAACAGCGTC GATACTCCTCGGAAGGATGCAGTCCTTTCATTGGTTGATATGCAGGAGGATGACCTCGTGGTGGCCGTGTCAGAC GGCATCCTGGATAATCTCTGGGAGCATGAGATCCTGACTATTATCCTAGATAGTCTGGAGAAGTGGCAGCAAGGA CGTCATGAAGATAAGGACTCGGAGTGGGCGCCCCCGGCTGTAATGGCGGACGAGCAGATGGTGTTTCTAGCCAGG GAGCTGCTCAAATCTGCTCTGGAGATTGCTCAGGATCCCTTTGCCGAGAGTCCGTACATGGAGAAGGCGGTGGAT GAAGGACTGGCCGTGCAGGGTGGGAAAATGGATGATATCAGTGTGGCGGTTGACGACCCGACAGTCAAGATGAGG GCCAAGCGATCCAAGAAGTACCGCAAGCTCATGCACCAGTATGAGCTTACGTTTGGGTTCCGTGAGCCGTATCAG GTTCTGGTTGACTCTAATTTCCTCCGCGCCGTCCACTCCTTCAAAATGGACTTGATCCCCGCTCTGGAGCGCACT CTTCAAGGCAAACCCAAGCCTCTCCTCACAAAATGCTCCCTCGCCGCAATCATGGCCTCCCAACCCATCAACCCC AGGACCAACAACCCCTACCGACCCGACCACCTCCCCCCACCCACCACCCTTCCTCTCCGCCACTGCTCCCACAAC GCTGACTCGACCCCCATCGACGAAGTCGAGTGCCTCCTCTCTCTCCTCTCGCCCTCCGCGGAGAGCAAAAAGAAC AAGGAACATTACATCCTCGCGACGGCGGACCCGCACAACGCCAAGGACAAGTCCGCGACGGATAACACAGCCGCC GGTCGGAAACGGAAGCGCGACGCAGAGGACAAGGCTGAGGCGGCGTTACGGAAGTCGAGGTTGCTACGGCGCCAG GCTCGGTCGATTCCAGGTGTGCCGATTGTCTATGTGAAGAGGTCGGTGATGGTGTTGGAGCCGATGAGTGATCCT TCGGATGCGATCAGAGAGGGTGTGGAGAAGGGCAAGTTTAGGGTTGGGTTGAATGATGAAGCGAGAAAGCCGACG ACGGCTGGGGACGGGGAGAAGACGAAGAAGAAGAGGGATTTGAAGAAGCCCAAGGGACCGAATCCGCTGAGTGTG AAGAAGCCGAAGAAGAGGGCGCCGGAAGATACTCCCGGGAAGGCGGAGAAGCCGAAGAGAGAGGCTGAGGAGAGA CCTGCTGCGGAGGAGCGGGATGGAGAGGATGGAGATGCTGCGCCGAAGGCGAAGCGCAGACGTCGTCATCATAAT CGCGGTGCTGGGAAGACGGATGGTGATGAGGGTGGTGCGCAGGAGGCTGCCGCGCCGGCCGATGCCATGGATGAT TGA |
Transcript | >Ani_SJS100_1|g3101.t1 ATGGTGCCCAAGACTGTTGCTAGTTCGACAGGTTGTTTATCATTCATCTTCTCCTCCTCTTCTCCTCTCGCTTCG CCGGTAATTAGACGCAGCCCACTGTGGAGCGCTCATTCCGGGGCCCCCAGCATTTGGGTGCGACGATATCGCGCC GTCTGGCCTTCCTACGGCATCACCACTCCCATCCCGGATCCTAATCCACAGTTCCCCATCTCCCGTTCGCCTTTC TGCTTCCAGACAGGCTATGCTCTCTGCGCCAAACGGCCCTCGCGTCCCTTCCCCCCACCGTTCCTGTCTCCGCCC TCTTCCTCCTTTTCCGACCCGCTGACCACCCACTACCTGAGTCAGGATAAGAGATTATCCGTCCGGGGGGATCTG GTCCGCGGCCTGAACAACGGCGACGATGCTGTTTTAGTGGCGGAGAATTACCTCGCCGTGAACGATGGGGTCGGG GCGTGGGCAACCAAGCCGAGAGGTCATGCTGCGCTATGGTCTAGACTGCTCCTCCATTTCTGGGCTTTGGAAGTC GAACGAGACCCCAATGGACAGTCCGAATTAGATCCCATCGGCTATCTTCAACGAGCATACGAGGAAACCATCCGG GCAACGACTTCCCCAGGTGAATGGCTGGGAACTACCACATCGGTCACAGCGTTACTGCATTGGAAGCGCGATGCT ACGGGGAACATACGGCCCCTGCTCTACGTGACCAATATAGGTGACTGCAAGGTCTTTGTCATCCGACCTAGCGAG AAGAGAATCCTCTTTCGAACCAAGGAACAATGGCATTGGTTTGACTGTCCTATGCAGCTGGGCACAAACAGCGTC GATACTCCTCGGAAGGATGCAGTCCTTTCATTGGTTGATATGCAGGAGGATGACCTCGTGGTGGCCGTGTCAGAC GGCATCCTGGATAATCTCTGGGAGCATGAGATCCTGACTATTATCCTAGATAGTCTGGAGAAGTGGCAGCAAGGA CGTCATGAAGATAAGGACTCGGAGTGGGCGCCCCCGGCTGTAATGGCGGACGAGCAGATGGTGTTTCTAGCCAGG GAGCTGCTCAAATCTGCTCTGGAGATTGCTCAGGATCCCTTTGCCGAGAGTCCGTACATGGAGAAGGCGGTGGAT GAAGGACTGGCCGTGCAGGGTGGGAAAATGGATGATATCAGTGTGGCGGTTGACGACCCGACAGTCAAGATGAGG GCCAAGCGATCCAAGAAGTACCGCAAGCTCATGCACCAGTATGAGCTTACGTTTGGGTTCCGTGAGCCGTATCAG GTTCTGGTTGACTCTAATTTCCTCCGCGCCGTCCACTCCTTCAAAATGGACTTGATCCCCGCTCTGGAGCGCACT CTTCAAGGCAAACCCAAGCCTCTCCTCACAAAATGCTCCCTCGCCGCAATCATGGCCTCCCAACCCATCAACCCC AGGACCAACAACCCCTACCGACCCGACCACCTCCCCCCACCCACCACCCTTCCTCTCCGCCACTGCTCCCACAAC GCTGACTCGACCCCCATCGACGAAGTCGAGTGCCTCCTCTCTCTCCTCTCGCCCTCCGCGGAGAGCAAAAAGAAC AAGGAACATTACATCCTCGCGACGGCGGACCCGCACAACGCCAAGGACAAGTCCGCGACGGATAACACAGCCGCC GGTCGGAAACGGAAGCGCGACGCAGAGGACAAGGCTGAGGCGGCGTTACGGAAGTCGAGGTTGCTACGGCGCCAG GCTCGGTCGATTCCAGGTGTGCCGATTGTCTATGTGAAGAGGTCGGTGATGGTGTTGGAGCCGATGAGTGATCCT TCGGATGCGATCAGAGAGGGTGTGGAGAAGGGCAAGTTTAGGGTTGGGTTGAATGATGAAGCGAGAAAGCCGACG ACGGCTGGGGACGGGGAGAAGACGAAGAAGAAGAGGGATTTGAAGAAGCCCAAGGGACCGAATCCGCTGAGTGTG AAGAAGCCGAAGAAGAGGGCGCCGGAAGATACTCCCGGGAAGGCGGAGAAGCCGAAGAGAGAGGCTGAGGAGAGA CCTGCTGCGGAGGAGCGGGATGGAGAGGATGGAGATGCTGCGCCGAAGGCGAAGCGCAGACGTCGTCATCATAAT CGCGGTGCTGGGAAGACGGATGGTGATGAGGGTGGTGCGCAGGAGGCTGCCGCGCCGGCCGATGCCATGGATGAT TGA |
Gene | >Ani_SJS100_1|g3101.t1 ATGGTGCCCAAGACTGTTGCTAGTTCGACAGGTTGTTTATCATTCATCTTCTCCTCCTCTTCTCCTCTCGCTTCG CCGGTAATTAGACGCAGCCCACTGTGGAGCGCTCATTCCGGGGCCCCCAGCATTTGGGTGCGACGATATCGCGCC GTCTGGCCTTCCTACGGCATCACCACTCCCATCCCGGATCCTAATCCACAGTTCCCCATCTCCCGTTCGCCTTTC TGCTTCCAGACAGGCTATGCTCTCTGCGCCAAACGGCCCTCGCGTCCCTTCCCCCCACCGTTCCTGTCTCCGCCC TCTTCCTCCTTTTCCGACCCGCTGACCACCCACTACCTGAGTCAGGATAAGAGATTATCCGTCCGGGGGGATCTG GTCCGCGGCCTGAACAACGGCGACGATGCTGTTTTAGTGGCGGAGAATTACCTCGCCGTGAACGATGGGGTCGGG GCGTGGGCAACCAAGCCGAGAGGTCATGCTGCGTACGTTGTTTGGTCCCTCAGTAGCAGTCTCCGCGGACACCCC CCTACTACTGACCCTACTGGATCCGTCTCATCCCTTCCCGCGTGCTGACATACCCTTCCTTGTTTACATAGGCTA TGGTCTAGACTGCTCCTCCATTTCTGGGCTTTGGAAGTCGAACGAGACCCCAATGGACAGTCCGAATTAGATCCC ATCGGCTATCTTCAACGAGCATACGAGGAAACCATCCGGGCAACGACTTCCCCAGGTGAATGGCTGGGAACTACC ACATCGGTCACAGCGTTACTGCATTGGAAGCGCGATGCTACGGGGAACATACGGCCCCTGCTCTACGTGACCAAT ATAGGTGACTGCAAGGTCTTTGTCATCCGACCTAGCGAGAAGAGAATCCTCTTTCGAACCAAGGAACAATGGCAT TGGTTTGACTGTCCTATGCAGCTGGGCACAAACAGCGTCGATACTCCTCGGAAGGATGCAGTCCTTTCATTGGTT GATATGCAGGAGGATGACCTCGTGGTGGCCGTGTCAGACGGCATCCTGGATAATCTCTGGGAGCATGAGATCCTG ACTATTATCCTAGATAGTCTGGAGAAGTGGCAGCAAGGACGTCATGAAGATAAGGACTCGGAGTGGGCGCCCCCG GCTGTAATGGCGGACGAGCAGATGGTGTTTCTAGCCAGGGAGCTGCTCAAATCTGCTCTGGAGATTGCTCAGGAT CCCTTTGCCGAGAGTCCGTACATGGAGAAGGCGGTGGATGAAGGACTGGCCGTGCAGGGTGGTGAGTGTCTTCGC ATACCGGTTCAGCGCAGTAGACTAATCTTGGGGCAGGGAAAATGGATGATATCAGTGTGGTAATCGGTTCTTGCA GGAGGAGGCAGTAGGCCTTTCCGCTGGTAAACCTTGCACGCAGGCGGTTGGTTAGGACTGAAGCAGTTCTTACAC AGCTCATGCCAGCACGGAGTTGACTTGCATAGCCTTTCATACTTTGACTTCCCGCACAAACCTGCGTCTTGATTT CTGTGGGAGAGGGCGTTCTGTAAGATGGCAGATGTCCGAATCAACTTCGGCTCGGCCGTCGGACAGTCGCTCAAT CATATTGCATACGCACTATATGTGCATGGCATGGGTGGTGTATATGTTGCATGTTGGGATCGGGGGCCATTTGGA GGCCGGTTCGAGAGGTGGTAATGGCGTTCGTGGGACATTTTACGTTTCGGGCTATATATATTCGACTGGCACAGC GAGATAGACTACTGCTTATTATCATTGCATTAATACCCTCGACATATTCTGCCAATTTATCAACTTTCCTTGTGA GACAAAAAGTAAACACGCATCTCCCACATGCCCTAATTCCAAATTTTCTACTCCAAGCCCCATACAGACATACAT ACACATACTACATATGTAAGTAACTACACAATCTCTCACCATCACAAAACAAAGACAAAAACAAAAGAGAAAAAG AAATTGCCTCCACACGGGATCGAACCGTGGACCTCATCATTACTAGTGATGCGCTCTACCACTGAGCTATAAAGG CGCTTTGATTGAAAGGTGGCCCCATATTTGACTCCATCAACGGCCGCTTAACAAGCCCACGCACAGACCACATCC CGAGCTTTCTCCTCCGCCCGGCAAAAAAAGTGACCGCCGACGCAAAGAAAAAAAAGTCCAATTGCACCCAACCCA ATCCCCCTCACAGGTTATACATACTATATTCTAACGCACCTCAGACGACCCGACAGTCAAGATGAGGGCCAAGCG ATCCAAGAAGTACCGCAAGCTCATGCACCAGTATGAGCTTACGTTTGGGTTCCGTGAGCCGTATCAGGTTCTGGG TATGCAGACATCCATTCAACCAATCACTCATACTATCATGTCCAGGATAAGGGTATACTAACTAATATATGTGAC AGTTGACTCTAATTTCCTCCGCGCCGTCCACTCCTTCAAAATGGACTTGATCCCCGCTCTGGAGCGCACTCTTCA AGGCAAACCCAAGCCTCGTATGTTGCCCCGGATATCAACTTTCGACTGCAATCAGTACAGTATACTAACAAATTG GATCAGTCCTCACAAAATGCTCCCTCGCCGCAATCATGGCCTCCCAACCCATCAACCCCAGGACCAACAACCCCT ACCGACCCGACCACCTCCCCCCACCCACCACCCTTCCTCTCCGCCACTGCTCCCACAACGCTGACTCGACCCCCA TCGACGAAGTCGAGTGCCTCCTCTCTCTCCTCTCGCCCTCCGCGGAGAGCAAAAAGAACAAGGAACATTACATCC TCGCGACGGCGGACCCGCACAACGCCAAGGACAAGTCCGCGACGGATAACACAGCCGCCGGTCGGAAACGGAAGC GCGACGCAGAGGACAAGGCTGAGGCGGCGTTACGGAAGTCGAGGTTGCTACGGCGCCAGGCTCGGTCGATTCCAG GTGTGCCGATTGTCTATGTGAAGAGGTCGGTGATGGTGTTGGAGCCGATGAGTGATCCTTCGGATGCGATCAGAG AGGGTGTGGAGAAGGGCAAGTTTAGGGTTGGGTTGAATGATGAAGCGAGAAAGCCGACGACGGCTGGGGACGGGG AGAAGACGAAGAAGAAGAGGGATTTGAAGAAGCCCAAGGGACCGAATCCGCTGAGTGTGAAGAAGCCGAAGAAGA GGGCGCCGGAAGATACTCCCGGGAAGGCGGAGAAGCCGAAGAGAGAGGCTGAGGAGAGACCTGCTGCGGAGGAGC GGGATGGAGAGGATGGAGATGCTGCGCCGAAGGCGAAGCGCAGACGTCGTCATCATAATCGCGGTGCTGGGAAGA CGGATGGTGATGAGGGTGGTGCGCAGGAGGCTGCCGCGCCGGCCGATGCCATGGATGATTGA |