© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g31.t1 |
| Gene name | |
| Location | scaffold_001:103625..104884 |
| Strand | - |
| Gene length (bp) | 1259 |
| Transcript length (bp) | 1104 |
| Coding sequence length (bp) | 1104 |
| Protein length (aa) | 368 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF10176 | DUF2370 | Protein of unknown function (DUF2370) | 2.4E-92 | 143 | 350 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0007034 | vacuolar transport | Yes |
| GO:0030001 | metal ion transport | Yes |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0006812 | cation transport | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0051649 | establishment of localization in cell | No |
| GO:0051641 | cellular localization | No |
| GO:0006811 | ion transport | No |
| GO:0046907 | intracellular transport | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 70 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 214 | 236 | 22 |
| 2 | 306 | 328 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g31.t1 MSSQRYQRVNARDEDDDDTLQSHSSIPLRPTPSSPPPSFHSRSSSPSSRRLLHDDPQRDHADQTLADAFGDGSDS ESDDEPDDRQRLMRAQPDSRPVADTSSAAAAASSSSSGSEQQSGDSRIGGGLPRRQTILPSFSTPSSGAGRVISS SNDGVFANLAAKPERGEKNEDLPPSYEEAAADATPPYWETTILAPGISSDEVFVDGLPVGSIFSFVWNAMISMSF QLVGFLLTYLLHTTHAAKNGSRAGLGLTLVQYGFYMKGGSESKGSDEGGADYVTPPDPNSHNFDPNNVDGGAGGD GGGGAVSSITTSEWISYVLMIVGWFILIRAISDFLRARRHEQLVLQSPERGLSVPVIAEGERSETVV* |
| Coding | >Ani_SJS100_1|g31.t1 ATGAGCTCGCAGCGTTATCAACGGGTCAACGCCCGCGATGAAGACGACGATGATACCCTCCAGTCACACTCCTCT ATCCCTCTCCGACCGACACCTTCCTCCCCGCCTCCCTCATTCCACTCTCGTTCCTCCTCCCCATCATCTAGACGC CTTCTCCACGACGATCCCCAAAGAGACCATGCAGACCAAACCCTGGCAGATGCTTTCGGTGATGGCAGCGACTCC GAGTCCGATGACGAGCCCGACGATCGTCAGCGCTTAATGCGGGCTCAGCCGGATTCCCGCCCGGTGGCGGACACC AGCAGCGCCGCTGCGGCTGCGTCTTCTTCTTCAAGCGGCTCAGAGCAACAGTCTGGCGATTCGCGCATCGGTGGA GGTCTTCCTCGACGGCAAACAATTCTGCCGTCCTTCAGTACCCCCAGTTCGGGAGCGGGCCGGGTGATCAGTTCG TCGAACGATGGTGTCTTTGCTAATCTGGCGGCTAAGCCGGAGCGCGGGGAGAAGAATGAGGATTTACCTCCGTCC TACGAGGAGGCCGCCGCAGATGCTACACCGCCGTATTGGGAAACAACAATTCTCGCACCGGGTATCTCTTCGGAC GAAGTCTTTGTGGATGGACTGCCGGTTGGATCGATTTTCTCGTTTGTCTGGAATGCTATGATCTCTATGTCGTTC CAGTTGGTTGGGTTCCTCTTGACCTACTTGCTTCACACAACGCACGCAGCCAAGAACGGCAGCCGGGCTGGTCTC GGTCTCACGCTGGTGCAGTATGGCTTCTACATGAAAGGTGGTAGTGAGTCGAAGGGGTCAGATGAAGGAGGCGCC GATTATGTAACACCACCGGACCCGAACAGCCATAATTTCGATCCGAATAACGTTGATGGTGGTGCGGGTGGTGAT GGTGGAGGCGGTGCTGTGTCCTCTATCACCACGAGCGAATGGATTTCATACGTCCTAATGATTGTTGGGTGGTTC ATCCTGATTCGAGCTATCAGCGATTTCCTGCGGGCACGCCGTCACGAGCAGCTGGTGTTGCAGAGTCCTGAGCGT GGGCTTAGCGTTCCGGTCATTGCAGAGGGCGAGCGATCGGAGACGGTTGTCTAG |
| Transcript | >Ani_SJS100_1|g31.t1 ATGAGCTCGCAGCGTTATCAACGGGTCAACGCCCGCGATGAAGACGACGATGATACCCTCCAGTCACACTCCTCT ATCCCTCTCCGACCGACACCTTCCTCCCCGCCTCCCTCATTCCACTCTCGTTCCTCCTCCCCATCATCTAGACGC CTTCTCCACGACGATCCCCAAAGAGACCATGCAGACCAAACCCTGGCAGATGCTTTCGGTGATGGCAGCGACTCC GAGTCCGATGACGAGCCCGACGATCGTCAGCGCTTAATGCGGGCTCAGCCGGATTCCCGCCCGGTGGCGGACACC AGCAGCGCCGCTGCGGCTGCGTCTTCTTCTTCAAGCGGCTCAGAGCAACAGTCTGGCGATTCGCGCATCGGTGGA GGTCTTCCTCGACGGCAAACAATTCTGCCGTCCTTCAGTACCCCCAGTTCGGGAGCGGGCCGGGTGATCAGTTCG TCGAACGATGGTGTCTTTGCTAATCTGGCGGCTAAGCCGGAGCGCGGGGAGAAGAATGAGGATTTACCTCCGTCC TACGAGGAGGCCGCCGCAGATGCTACACCGCCGTATTGGGAAACAACAATTCTCGCACCGGGTATCTCTTCGGAC GAAGTCTTTGTGGATGGACTGCCGGTTGGATCGATTTTCTCGTTTGTCTGGAATGCTATGATCTCTATGTCGTTC CAGTTGGTTGGGTTCCTCTTGACCTACTTGCTTCACACAACGCACGCAGCCAAGAACGGCAGCCGGGCTGGTCTC GGTCTCACGCTGGTGCAGTATGGCTTCTACATGAAAGGTGGTAGTGAGTCGAAGGGGTCAGATGAAGGAGGCGCC GATTATGTAACACCACCGGACCCGAACAGCCATAATTTCGATCCGAATAACGTTGATGGTGGTGCGGGTGGTGAT GGTGGAGGCGGTGCTGTGTCCTCTATCACCACGAGCGAATGGATTTCATACGTCCTAATGATTGTTGGGTGGTTC ATCCTGATTCGAGCTATCAGCGATTTCCTGCGGGCACGCCGTCACGAGCAGCTGGTGTTGCAGAGTCCTGAGCGT GGGCTTAGCGTTCCGGTCATTGCAGAGGGCGAGCGATCGGAGACGGTTGTCTAG |
| Gene | >Ani_SJS100_1|g31.t1 ATGAGCTCGCAGCGTTATCAACGGGTATGAGGCACCCACGTTCCTGATAGAAGCCGTCGGGTCGGCATCTGGTTG TCAGAAAAAGAAAGTACTGATACATGGGTCTCTATATAGGTCAACGCCCGCGATGAAGACGACGATGATACCCTC CAGTCACACTCCTCTATCCCTCTCCGACCGACACCTTCCTCCCCGCCTCCCTCATTCCACTCTCGTTCCTCCTCC CCATCATCTAGACGCCTTCTCCACGACGATCCCCAAAGAGACCATGCAGACCAAACCCTGGCAGATGCTTTCGGT GATGGCAGCGACTCCGAGTCCGATGACGAGCCCGACGATCGTCAGCGCTTAATGCGGGCTCAGCCGGATTCCCGC CCGGTGGCGGACACCAGCAGCGCCGCTGCGGCTGCGTCTTCTTCTTCAAGCGGCTCAGAGCAACAGTCTGGCGAT TCGCGCATCGGTGGAGGTCTTCCTCGACGGCAAACAATTCTGCCGTCCTTCAGTACCCCCAGTTCGGGAGCGGGC CGGGTGATCAGTTCGTCGAACGATGGTGTCTTTGCTAATCTGGCGGCTAAGCCGGAGCGCGGGGAGAAGAATGAG GATTTACCTCCGGTAGGTTGATTTCTTGGGGGAATTTGCGATGGAATAATGTTTGCTGATTATGTGCTGTTCTAT AGTCCTACGAGGAGGCCGCCGCAGATGCTACACCGCCGTATTGGGAAACAACAATTCTCGCACCGGGTATCTCTT CGGACGAAGTCTTTGTGGATGGACTGCCGGTTGGATCGATTTTCTCGTTTGTCTGGAATGCTATGATCTCTATGT CGTTCCAGTTGGTTGGGTTCCTCTTGACCTACTTGCTTCACACAACGCACGCAGCCAAGAACGGCAGCCGGGCTG GTCTCGGTCTCACGCTGGTGCAGTATGGCTTCTACATGAAAGGTGGTAGTGAGTCGAAGGGGTCAGATGAAGGAG GCGCCGATTATGTAACACCACCGGACCCGAACAGCCATAATTTCGATCCGAATAACGTTGATGGTGGTGCGGGTG GTGATGGTGGAGGCGGTGCTGTGTCCTCTATCACCACGAGCGAATGGATTTCATACGTCCTAATGATTGTTGGGT GGTTCATCCTGATTCGAGCTATCAGCGATTTCCTGCGGGCACGCCGTCACGAGCAGCTGGTGTTGCAGAGTCCTG AGCGTGGGCTTAGCGTTCCGGTCATTGCAGAGGGCGAGCGATCGGAGACGGTTGTCTAG |