Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g309.t1
Gene name
Location	scaffold_001:1015617..1016239
Strand	+
Gene length (bp)	622
Transcript length (bp)	555
Coding sequence length (bp)	555
Protein length (aa)	185

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF02656	DUF202	Domain of unknown function (DUF202)	6.6E-18	71	142

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 42	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	81	103	22
2	116	138	22
3	159	178	19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g309.t1 MSTTTQQHQESQESQEYNNHTLPKPPYNPLINPSNTRPILADDTLSLKSHIFLTRPYISTLLFENATSDARDHCA NERTFLSWLRLSMYLAIVAIAIIISFHFQTPPTGLERRMALPLGIVFWVLSLACLVNGFANYVRTVKKYSRKAAL VQSGWKTQVTFTVVGTVILGSCVLFLATDASTTN*
Coding	>Ani_SJS100_1\|g309.t1 ATGTCCACCACAACTCAACAACACCAAGAATCCCAAGAATCCCAAGAATACAACAACCACACCCTCCCCAAACCC CCCTACAACCCACTAATCAACCCCTCCAACACGCGCCCAATCCTGGCAGACGATACCCTATCCCTCAAATCCCAC ATCTTCCTAACCCGCCCCTACATATCGACCCTCCTATTCGAAAATGCCACCTCCGATGCCCGCGACCACTGCGCC AACGAGCGCACCTTCCTCTCCTGGCTCCGTCTCTCAATGTACCTCGCCATCGTGGCCATCGCCATCATAATCAGT TTCCATTTCCAGACGCCGCCGACGGGATTGGAGCGGCGGATGGCATTACCGCTAGGGATTGTGTTCTGGGTGCTG AGTTTGGCGTGTCTCGTGAATGGGTTTGCGAATTATGTGCGGACCGTCAAGAAGTATAGCCGGAAGGCGGCGCTC GTGCAGAGTGGGTGGAAGACGCAGGTTACGTTTACGGTGGTCGGGACGGTGATTTTGGGGAGTTGTGTGTTGTTT TTGGCGACGGATGCTAGTACAACTAACTAA
Transcript	>Ani_SJS100_1\|g309.t1 ATGTCCACCACAACTCAACAACACCAAGAATCCCAAGAATCCCAAGAATACAACAACCACACCCTCCCCAAACCC CCCTACAACCCACTAATCAACCCCTCCAACACGCGCCCAATCCTGGCAGACGATACCCTATCCCTCAAATCCCAC ATCTTCCTAACCCGCCCCTACATATCGACCCTCCTATTCGAAAATGCCACCTCCGATGCCCGCGACCACTGCGCC AACGAGCGCACCTTCCTCTCCTGGCTCCGTCTCTCAATGTACCTCGCCATCGTGGCCATCGCCATCATAATCAGT TTCCATTTCCAGACGCCGCCGACGGGATTGGAGCGGCGGATGGCATTACCGCTAGGGATTGTGTTCTGGGTGCTG AGTTTGGCGTGTCTCGTGAATGGGTTTGCGAATTATGTGCGGACCGTCAAGAAGTATAGCCGGAAGGCGGCGCTC GTGCAGAGTGGGTGGAAGACGCAGGTTACGTTTACGGTGGTCGGGACGGTGATTTTGGGGAGTTGTGTGTTGTTT TTGGCGACGGATGCTAGTACAACTAACTAA
Gene	>Ani_SJS100_1\|g309.t1 ATGTCCACCACAACTCAACAACACCAAGAATCCCAAGAATCCCAAGAATACAACAACCACACCCTCCCCAAACCC CCCTACAACCCACTAATCAACCCCTCCAACACGCGCCCAATCCTGGCAGACGAGTGAGCACCCACATCCCTCCCT TACCCCCCCTCCCATTGCATCGCAATACTGACAAAAAAAATACAGTACCCTATCCCTCAAATCCCACATCTTCCT AACCCGCCCCTACATATCGACCCTCCTATTCGAAAATGCCACCTCCGATGCCCGCGACCACTGCGCCAACGAGCG CACCTTCCTCTCCTGGCTCCGTCTCTCAATGTACCTCGCCATCGTGGCCATCGCCATCATAATCAGTTTCCATTT CCAGACGCCGCCGACGGGATTGGAGCGGCGGATGGCATTACCGCTAGGGATTGTGTTCTGGGTGCTGAGTTTGGC GTGTCTCGTGAATGGGTTTGCGAATTATGTGCGGACCGTCAAGAAGTATAGCCGGAAGGCGGCGCTCGTGCAGAG TGGGTGGAAGACGCAGGTTACGTTTACGGTGGTCGGGACGGTGATTTTGGGGAGTTGTGTGTTGTTTTTGGCGAC GGATGCTAGTACAACTAACTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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