Protein ID | Ani_SJS100_1|g306.t1 |
Gene name | |
Location | scaffold_001:1008322..1011121 |
Strand | - |
Gene length (bp) | 2799 |
Transcript length (bp) | 2799 |
Coding sequence length (bp) | 2799 |
Protein length (aa) | 933 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00270 | DEAD | DEAD/DEAH box helicase | 1.3E-48 | 114 | 279 |
PF00271 | Helicase_C | Helicase conserved C-terminal domain | 1.3E-21 | 369 | 469 |
PF08147 | DBP10CT | DBP10CT (NUC160) domain | 1.9E-21 | 763 | 827 |
GO Term | Description | Terminal node |
---|---|---|
GO:0003676 | nucleic acid binding | Yes |
GO:0003724 | RNA helicase activity | Yes |
GO:0005524 | ATP binding | Yes |
GO:0003723 | RNA binding | Yes |
GO:0005634 | nucleus | Yes |
GO:0140640 | catalytic activity, acting on a nucleic acid | No |
GO:0036094 | small molecule binding | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0032553 | ribonucleotide binding | No |
GO:1901265 | nucleoside phosphate binding | No |
GO:0043226 | organelle | No |
GO:0017076 | purine nucleotide binding | No |
GO:0008186 | ATP-dependent activity, acting on RNA | No |
GO:0140657 | ATP-dependent activity | No |
GO:0003674 | molecular_function | No |
GO:0097367 | carbohydrate derivative binding | No |
GO:0032555 | purine ribonucleotide binding | No |
GO:0043167 | ion binding | No |
GO:0000166 | nucleotide binding | No |
GO:0035639 | purine ribonucleoside triphosphate binding | No |
GO:0140098 | catalytic activity, acting on RNA | No |
GO:0110165 | cellular anatomical entity | No |
GO:0030554 | adenyl nucleotide binding | No |
GO:0043231 | intracellular membrane-bounded organelle | No |
GO:0043227 | membrane-bounded organelle | No |
GO:0043168 | anion binding | No |
GO:0003824 | catalytic activity | No |
GO:0043229 | intracellular organelle | No |
GO:0005575 | cellular_component | No |
GO:0004386 | helicase activity | No |
GO:0097159 | organic cyclic compound binding | No |
GO:0032559 | adenyl ribonucleotide binding | No |
GO:0005488 | binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g306.t1 MPGRAASPAMSENEFDITNALFQNDSDSDNEAPAKQAKRQPKAAAPQQLDFLNGGGDDDDEDDEAFIAETQASAN RKASNLKGRTVKKGGGFQAMGLNANLLKAITRKGFSVPTPIQRKTIPVIMEDQDVVGMARTGSGKTAAFVIPMIQ KLKSHSTQVGARGLILSPSRELALQTLKVVKELGKGTDLKAVLLVGGDSLEEQFSMMAGNPDIVIATPGRFLHLK VEMNLDLSSIRYVVFDEADRLFEMGFAAQLTEILHGLPSTRQTLLFSATLPKSLVEFARAGLQEPTLVRLDTESK ISPDLQNAFFSVKSGDKEGALMYILHNVIKMPTGPTEAAQRMKEENASGKSSKFSKKRKRSDDKAINFKESPTKH STIIFAATKHHVDYLYSLLNEAGFATSYAYGSLDQTARKIQVHNFRTGISNILVVTDVAARGIDIPILANVINYD FPSQAKIFVHRVGRTARAGRTGWSYSLVRDSDAPYLLDLQLFLGRRLVLGREHGDQVNFAEDVVVGGFPRDGLSQ SCEWVNKVLDDTVDIAAQRSVASKGEKLYLRTRNAASLESAKRSKEVVSSDNWTALHPLFNDETSQLEAEREKML ARIGGYRPNETIFEVNNRRSGKPENEEALTTIKRVRTTLDSKKKRAQEAKSEFVDDDVPTKSGDADADDAEDGAF SDEDEAGEGAADNMSLASESDLEVTFSSYNQPSNKKAKKEAGATSFQNPEYFMSYTPNNTNMAEDRAYGVHSGTN ANFAQASRDAAMDLLGDEGSRGFGEPRTMMRWDKRHKKYVSRQNDEDGSKGTRLVRGESGAKIAASFRSGRFDAW KKGKRLTRLPRVGEAETPGLGADLNHYRGGRRFKHNKEQAPKRADPLRGDYDKMKKKNEAAKERQLGKFGGAAAG GKSELKGTDDIRLARNLKQKRREKNARPSRKK* |
Coding | >Ani_SJS100_1|g306.t1 ATGCCTGGTCGTGCCGCTTCTCCGGCCATGTCGGAGAATGAATTCGACATCACCAATGCGCTGTTTCAAAATGAC AGCGACTCCGACAACGAGGCCCCCGCGAAGCAAGCCAAGCGACAACCGAAGGCGGCGGCTCCCCAGCAGCTCGAT TTTCTGAACGGCGGCGGCGATGACGACGACGAAGATGACGAGGCGTTTATCGCGGAGACGCAGGCGTCTGCGAAC CGAAAGGCGTCGAATTTGAAGGGTCGCACGGTGAAGAAGGGTGGTGGTTTCCAGGCCATGGGGCTGAATGCGAAC TTGTTGAAGGCCATCACAAGGAAGGGTTTCTCGGTGCCGACACCTATTCAGCGCAAGACGATCCCAGTGATTATG GAGGATCAGGATGTCGTGGGCATGGCGCGCACGGGTTCCGGAAAGACCGCTGCGTTCGTCATTCCCATGATTCAG AAGTTGAAGAGCCATAGCACCCAGGTTGGAGCCCGTGGGCTGATCTTGTCGCCGTCGCGTGAGTTGGCGCTGCAG ACTTTGAAGGTCGTGAAGGAGCTTGGTAAGGGGACGGATCTCAAGGCGGTGTTGTTGGTTGGTGGTGATAGTTTG GAGGAACAGTTCTCGATGATGGCTGGTAACCCCGATATTGTGATTGCGACGCCCGGTCGGTTCCTGCACTTGAAG GTCGAAATGAACCTCGATTTGTCGAGTATCCGTTATGTTGTGTTCGATGAGGCCGATCGCCTGTTCGAAATGGGT TTCGCTGCTCAGTTGACCGAAATTCTTCACGGCTTGCCGTCTACTCGCCAGACCCTGCTTTTCTCGGCTACCCTT CCCAAATCCCTGGTGGAATTCGCGCGCGCTGGTCTGCAGGAGCCTACGCTCGTTCGTTTGGATACTGAGAGCAAG ATCTCGCCGGATCTGCAGAATGCGTTCTTCTCTGTCAAGTCCGGAGACAAGGAGGGCGCGCTGATGTATATCCTC CACAACGTGATTAAGATGCCTACGGGTCCGACGGAGGCCGCGCAGCGCATGAAGGAAGAGAACGCCAGTGGAAAG AGCTCGAAGTTCTCGAAGAAGCGGAAGCGATCGGACGACAAAGCAATCAACTTTAAGGAGTCGCCCACGAAGCAT TCCACGATCATTTTCGCCGCTACCAAGCACCACGTCGACTACTTGTACTCTCTGCTGAACGAAGCCGGATTTGCG ACATCCTACGCTTACGGTTCCCTCGACCAGACGGCTCGTAAAATCCAAGTGCACAACTTCCGTACCGGCATTTCG AACATCCTGGTCGTCACTGACGTCGCAGCCAGAGGTATCGATATTCCCATTCTGGCCAATGTCATCAACTACGAC TTTCCCTCCCAAGCCAAGATCTTCGTCCACCGTGTCGGTCGTACCGCGCGTGCTGGCCGCACCGGTTGGAGTTAC AGTCTGGTCCGCGATTCCGATGCCCCCTATCTGCTCGATCTGCAGCTGTTCCTCGGCCGGCGACTGGTCCTCGGC CGGGAGCATGGCGACCAAGTCAACTTCGCCGAGGATGTGGTCGTCGGAGGCTTCCCCCGCGACGGCCTGTCTCAG AGCTGCGAGTGGGTGAACAAGGTCTTGGACGATACGGTAGATATCGCCGCGCAGCGTTCCGTCGCCAGCAAGGGT GAAAAGCTCTACTTGCGCACGCGTAACGCCGCGTCTCTGGAGAGTGCCAAGCGCTCGAAAGAGGTCGTTTCATCC GACAATTGGACGGCCCTGCACCCCCTGTTCAACGACGAGACCAGTCAACTCGAAGCCGAGCGCGAGAAGATGCTG GCCCGCATCGGAGGCTACCGGCCGAATGAGACTATCTTCGAAGTGAACAACCGCCGCAGCGGCAAGCCCGAGAAC GAGGAGGCGCTCACGACAATCAAGCGCGTCCGAACCACGCTCGACTCGAAGAAGAAGCGCGCCCAGGAAGCGAAA TCGGAATTCGTCGACGACGACGTCCCCACCAAGTCCGGAGACGCTGACGCCGACGACGCCGAAGATGGTGCCTTC TCCGACGAAGACGAAGCCGGCGAAGGCGCCGCCGACAACATGTCACTTGCATCGGAATCCGACCTCGAAGTTACC TTCTCCTCCTACAACCAGCCCAGCAATAAGAAGGCCAAGAAAGAAGCCGGTGCCACCTCCTTCCAGAACCCCGAA TACTTCATGTCCTACACCCCCAACAACACCAACATGGCCGAAGACCGCGCGTACGGTGTGCACTCCGGCACCAAC GCCAACTTCGCACAGGCATCCCGCGACGCAGCCATGGATCTGCTCGGCGATGAAGGCAGCCGCGGGTTCGGCGAG CCTCGCACCATGATGCGCTGGGACAAGCGTCACAAGAAGTACGTGTCGCGACAGAACGACGAGGACGGATCGAAG GGTACTCGTCTGGTGCGTGGTGAGAGTGGTGCCAAGATCGCCGCCAGCTTCCGCAGTGGACGCTTCGACGCCTGG AAGAAGGGCAAGCGACTGACTCGTCTGCCGCGTGTGGGTGAGGCCGAGACACCGGGTCTGGGGGCGGACCTGAAC CACTACCGCGGTGGTAGACGCTTCAAGCATAACAAGGAGCAGGCGCCGAAGCGGGCTGATCCGCTCCGCGGAGAT TATGATAAGATGAAGAAGAAGAATGAGGCAGCCAAGGAGCGCCAGTTGGGCAAGTTCGGAGGAGCCGCGGCGGGC GGTAAGAGTGAGCTGAAGGGTACGGATGATATTCGGTTAGCCAGGAATTTGAAGCAGAAGAGACGCGAGAAGAAT GCTCGACCGTCGAGGAAGAAGTAG |
Transcript | >Ani_SJS100_1|g306.t1 ATGCCTGGTCGTGCCGCTTCTCCGGCCATGTCGGAGAATGAATTCGACATCACCAATGCGCTGTTTCAAAATGAC AGCGACTCCGACAACGAGGCCCCCGCGAAGCAAGCCAAGCGACAACCGAAGGCGGCGGCTCCCCAGCAGCTCGAT TTTCTGAACGGCGGCGGCGATGACGACGACGAAGATGACGAGGCGTTTATCGCGGAGACGCAGGCGTCTGCGAAC CGAAAGGCGTCGAATTTGAAGGGTCGCACGGTGAAGAAGGGTGGTGGTTTCCAGGCCATGGGGCTGAATGCGAAC TTGTTGAAGGCCATCACAAGGAAGGGTTTCTCGGTGCCGACACCTATTCAGCGCAAGACGATCCCAGTGATTATG GAGGATCAGGATGTCGTGGGCATGGCGCGCACGGGTTCCGGAAAGACCGCTGCGTTCGTCATTCCCATGATTCAG AAGTTGAAGAGCCATAGCACCCAGGTTGGAGCCCGTGGGCTGATCTTGTCGCCGTCGCGTGAGTTGGCGCTGCAG ACTTTGAAGGTCGTGAAGGAGCTTGGTAAGGGGACGGATCTCAAGGCGGTGTTGTTGGTTGGTGGTGATAGTTTG GAGGAACAGTTCTCGATGATGGCTGGTAACCCCGATATTGTGATTGCGACGCCCGGTCGGTTCCTGCACTTGAAG GTCGAAATGAACCTCGATTTGTCGAGTATCCGTTATGTTGTGTTCGATGAGGCCGATCGCCTGTTCGAAATGGGT TTCGCTGCTCAGTTGACCGAAATTCTTCACGGCTTGCCGTCTACTCGCCAGACCCTGCTTTTCTCGGCTACCCTT CCCAAATCCCTGGTGGAATTCGCGCGCGCTGGTCTGCAGGAGCCTACGCTCGTTCGTTTGGATACTGAGAGCAAG ATCTCGCCGGATCTGCAGAATGCGTTCTTCTCTGTCAAGTCCGGAGACAAGGAGGGCGCGCTGATGTATATCCTC CACAACGTGATTAAGATGCCTACGGGTCCGACGGAGGCCGCGCAGCGCATGAAGGAAGAGAACGCCAGTGGAAAG AGCTCGAAGTTCTCGAAGAAGCGGAAGCGATCGGACGACAAAGCAATCAACTTTAAGGAGTCGCCCACGAAGCAT TCCACGATCATTTTCGCCGCTACCAAGCACCACGTCGACTACTTGTACTCTCTGCTGAACGAAGCCGGATTTGCG ACATCCTACGCTTACGGTTCCCTCGACCAGACGGCTCGTAAAATCCAAGTGCACAACTTCCGTACCGGCATTTCG AACATCCTGGTCGTCACTGACGTCGCAGCCAGAGGTATCGATATTCCCATTCTGGCCAATGTCATCAACTACGAC TTTCCCTCCCAAGCCAAGATCTTCGTCCACCGTGTCGGTCGTACCGCGCGTGCTGGCCGCACCGGTTGGAGTTAC AGTCTGGTCCGCGATTCCGATGCCCCCTATCTGCTCGATCTGCAGCTGTTCCTCGGCCGGCGACTGGTCCTCGGC CGGGAGCATGGCGACCAAGTCAACTTCGCCGAGGATGTGGTCGTCGGAGGCTTCCCCCGCGACGGCCTGTCTCAG AGCTGCGAGTGGGTGAACAAGGTCTTGGACGATACGGTAGATATCGCCGCGCAGCGTTCCGTCGCCAGCAAGGGT GAAAAGCTCTACTTGCGCACGCGTAACGCCGCGTCTCTGGAGAGTGCCAAGCGCTCGAAAGAGGTCGTTTCATCC GACAATTGGACGGCCCTGCACCCCCTGTTCAACGACGAGACCAGTCAACTCGAAGCCGAGCGCGAGAAGATGCTG GCCCGCATCGGAGGCTACCGGCCGAATGAGACTATCTTCGAAGTGAACAACCGCCGCAGCGGCAAGCCCGAGAAC GAGGAGGCGCTCACGACAATCAAGCGCGTCCGAACCACGCTCGACTCGAAGAAGAAGCGCGCCCAGGAAGCGAAA TCGGAATTCGTCGACGACGACGTCCCCACCAAGTCCGGAGACGCTGACGCCGACGACGCCGAAGATGGTGCCTTC TCCGACGAAGACGAAGCCGGCGAAGGCGCCGCCGACAACATGTCACTTGCATCGGAATCCGACCTCGAAGTTACC TTCTCCTCCTACAACCAGCCCAGCAATAAGAAGGCCAAGAAAGAAGCCGGTGCCACCTCCTTCCAGAACCCCGAA TACTTCATGTCCTACACCCCCAACAACACCAACATGGCCGAAGACCGCGCGTACGGTGTGCACTCCGGCACCAAC GCCAACTTCGCACAGGCATCCCGCGACGCAGCCATGGATCTGCTCGGCGATGAAGGCAGCCGCGGGTTCGGCGAG CCTCGCACCATGATGCGCTGGGACAAGCGTCACAAGAAGTACGTGTCGCGACAGAACGACGAGGACGGATCGAAG GGTACTCGTCTGGTGCGTGGTGAGAGTGGTGCCAAGATCGCCGCCAGCTTCCGCAGTGGACGCTTCGACGCCTGG AAGAAGGGCAAGCGACTGACTCGTCTGCCGCGTGTGGGTGAGGCCGAGACACCGGGTCTGGGGGCGGACCTGAAC CACTACCGCGGTGGTAGACGCTTCAAGCATAACAAGGAGCAGGCGCCGAAGCGGGCTGATCCGCTCCGCGGAGAT TATGATAAGATGAAGAAGAAGAATGAGGCAGCCAAGGAGCGCCAGTTGGGCAAGTTCGGAGGAGCCGCGGCGGGC GGTAAGAGTGAGCTGAAGGGTACGGATGATATTCGGTTAGCCAGGAATTTGAAGCAGAAGAGACGCGAGAAGAAT GCTCGACCGTCGAGGAAGAAGTAG |
Gene | >Ani_SJS100_1|g306.t1 ATGCCTGGTCGTGCCGCTTCTCCGGCCATGTCGGAGAATGAATTCGACATCACCAATGCGCTGTTTCAAAATGAC AGCGACTCCGACAACGAGGCCCCCGCGAAGCAAGCCAAGCGACAACCGAAGGCGGCGGCTCCCCAGCAGCTCGAT TTTCTGAACGGCGGCGGCGATGACGACGACGAAGATGACGAGGCGTTTATCGCGGAGACGCAGGCGTCTGCGAAC CGAAAGGCGTCGAATTTGAAGGGTCGCACGGTGAAGAAGGGTGGTGGTTTCCAGGCCATGGGGCTGAATGCGAAC TTGTTGAAGGCCATCACAAGGAAGGGTTTCTCGGTGCCGACACCTATTCAGCGCAAGACGATCCCAGTGATTATG GAGGATCAGGATGTCGTGGGCATGGCGCGCACGGGTTCCGGAAAGACCGCTGCGTTCGTCATTCCCATGATTCAG AAGTTGAAGAGCCATAGCACCCAGGTTGGAGCCCGTGGGCTGATCTTGTCGCCGTCGCGTGAGTTGGCGCTGCAG ACTTTGAAGGTCGTGAAGGAGCTTGGTAAGGGGACGGATCTCAAGGCGGTGTTGTTGGTTGGTGGTGATAGTTTG GAGGAACAGTTCTCGATGATGGCTGGTAACCCCGATATTGTGATTGCGACGCCCGGTCGGTTCCTGCACTTGAAG GTCGAAATGAACCTCGATTTGTCGAGTATCCGTTATGTTGTGTTCGATGAGGCCGATCGCCTGTTCGAAATGGGT TTCGCTGCTCAGTTGACCGAAATTCTTCACGGCTTGCCGTCTACTCGCCAGACCCTGCTTTTCTCGGCTACCCTT CCCAAATCCCTGGTGGAATTCGCGCGCGCTGGTCTGCAGGAGCCTACGCTCGTTCGTTTGGATACTGAGAGCAAG ATCTCGCCGGATCTGCAGAATGCGTTCTTCTCTGTCAAGTCCGGAGACAAGGAGGGCGCGCTGATGTATATCCTC CACAACGTGATTAAGATGCCTACGGGTCCGACGGAGGCCGCGCAGCGCATGAAGGAAGAGAACGCCAGTGGAAAG AGCTCGAAGTTCTCGAAGAAGCGGAAGCGATCGGACGACAAAGCAATCAACTTTAAGGAGTCGCCCACGAAGCAT TCCACGATCATTTTCGCCGCTACCAAGCACCACGTCGACTACTTGTACTCTCTGCTGAACGAAGCCGGATTTGCG ACATCCTACGCTTACGGTTCCCTCGACCAGACGGCTCGTAAAATCCAAGTGCACAACTTCCGTACCGGCATTTCG AACATCCTGGTCGTCACTGACGTCGCAGCCAGAGGTATCGATATTCCCATTCTGGCCAATGTCATCAACTACGAC TTTCCCTCCCAAGCCAAGATCTTCGTCCACCGTGTCGGTCGTACCGCGCGTGCTGGCCGCACCGGTTGGAGTTAC AGTCTGGTCCGCGATTCCGATGCCCCCTATCTGCTCGATCTGCAGCTGTTCCTCGGCCGGCGACTGGTCCTCGGC CGGGAGCATGGCGACCAAGTCAACTTCGCCGAGGATGTGGTCGTCGGAGGCTTCCCCCGCGACGGCCTGTCTCAG AGCTGCGAGTGGGTGAACAAGGTCTTGGACGATACGGTAGATATCGCCGCGCAGCGTTCCGTCGCCAGCAAGGGT GAAAAGCTCTACTTGCGCACGCGTAACGCCGCGTCTCTGGAGAGTGCCAAGCGCTCGAAAGAGGTCGTTTCATCC GACAATTGGACGGCCCTGCACCCCCTGTTCAACGACGAGACCAGTCAACTCGAAGCCGAGCGCGAGAAGATGCTG GCCCGCATCGGAGGCTACCGGCCGAATGAGACTATCTTCGAAGTGAACAACCGCCGCAGCGGCAAGCCCGAGAAC GAGGAGGCGCTCACGACAATCAAGCGCGTCCGAACCACGCTCGACTCGAAGAAGAAGCGCGCCCAGGAAGCGAAA TCGGAATTCGTCGACGACGACGTCCCCACCAAGTCCGGAGACGCTGACGCCGACGACGCCGAAGATGGTGCCTTC TCCGACGAAGACGAAGCCGGCGAAGGCGCCGCCGACAACATGTCACTTGCATCGGAATCCGACCTCGAAGTTACC TTCTCCTCCTACAACCAGCCCAGCAATAAGAAGGCCAAGAAAGAAGCCGGTGCCACCTCCTTCCAGAACCCCGAA TACTTCATGTCCTACACCCCCAACAACACCAACATGGCCGAAGACCGCGCGTACGGTGTGCACTCCGGCACCAAC GCCAACTTCGCACAGGCATCCCGCGACGCAGCCATGGATCTGCTCGGCGATGAAGGCAGCCGCGGGTTCGGCGAG CCTCGCACCATGATGCGCTGGGACAAGCGTCACAAGAAGTACGTGTCGCGACAGAACGACGAGGACGGATCGAAG GGTACTCGTCTGGTGCGTGGTGAGAGTGGTGCCAAGATCGCCGCCAGCTTCCGCAGTGGACGCTTCGACGCCTGG AAGAAGGGCAAGCGACTGACTCGTCTGCCGCGTGTGGGTGAGGCCGAGACACCGGGTCTGGGGGCGGACCTGAAC CACTACCGCGGTGGTAGACGCTTCAAGCATAACAAGGAGCAGGCGCCGAAGCGGGCTGATCCGCTCCGCGGAGAT TATGATAAGATGAAGAAGAAGAATGAGGCAGCCAAGGAGCGCCAGTTGGGCAAGTTCGGAGGAGCCGCGGCGGGC GGTAAGAGTGAGCTGAAGGGTACGGATGATATTCGGTTAGCCAGGAATTTGAAGCAGAAGAGACGCGAGAAGAAT GCTCGACCGTCGAGGAAGAAGTAG |