Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g306.t1
Gene name
Locationscaffold_001:1008322..1011121
Strand-
Gene length (bp)2799
Transcript length (bp)2799
Coding sequence length (bp)2799
Protein length (aa) 933

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00270 DEAD DEAD/DEAH box helicase 1.3E-48 114 279
PF00271 Helicase_C Helicase conserved C-terminal domain 1.3E-21 369 469
PF08147 DBP10CT DBP10CT (NUC160) domain 1.9E-21 763 827

GO

GO Term Description Terminal node
GO:0003676 nucleic acid binding Yes
GO:0003724 RNA helicase activity Yes
GO:0005524 ATP binding Yes
GO:0003723 RNA binding Yes
GO:0005634 nucleus Yes
GO:0140640 catalytic activity, acting on a nucleic acid No
GO:0036094 small molecule binding No
GO:1901363 heterocyclic compound binding No
GO:0032553 ribonucleotide binding No
GO:1901265 nucleoside phosphate binding No
GO:0043226 organelle No
GO:0017076 purine nucleotide binding No
GO:0008186 ATP-dependent activity, acting on RNA No
GO:0140657 ATP-dependent activity No
GO:0003674 molecular_function No
GO:0097367 carbohydrate derivative binding No
GO:0032555 purine ribonucleotide binding No
GO:0043167 ion binding No
GO:0000166 nucleotide binding No
GO:0035639 purine ribonucleoside triphosphate binding No
GO:0140098 catalytic activity, acting on RNA No
GO:0110165 cellular anatomical entity No
GO:0030554 adenyl nucleotide binding No
GO:0043231 intracellular membrane-bounded organelle No
GO:0043227 membrane-bounded organelle No
GO:0043168 anion binding No
GO:0003824 catalytic activity No
GO:0043229 intracellular organelle No
GO:0005575 cellular_component No
GO:0004386 helicase activity No
GO:0097159 organic cyclic compound binding No
GO:0032559 adenyl ribonucleotide binding No
GO:0005488 binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g306.t1
MPGRAASPAMSENEFDITNALFQNDSDSDNEAPAKQAKRQPKAAAPQQLDFLNGGGDDDDEDDEAFIAETQASAN
RKASNLKGRTVKKGGGFQAMGLNANLLKAITRKGFSVPTPIQRKTIPVIMEDQDVVGMARTGSGKTAAFVIPMIQ
KLKSHSTQVGARGLILSPSRELALQTLKVVKELGKGTDLKAVLLVGGDSLEEQFSMMAGNPDIVIATPGRFLHLK
VEMNLDLSSIRYVVFDEADRLFEMGFAAQLTEILHGLPSTRQTLLFSATLPKSLVEFARAGLQEPTLVRLDTESK
ISPDLQNAFFSVKSGDKEGALMYILHNVIKMPTGPTEAAQRMKEENASGKSSKFSKKRKRSDDKAINFKESPTKH
STIIFAATKHHVDYLYSLLNEAGFATSYAYGSLDQTARKIQVHNFRTGISNILVVTDVAARGIDIPILANVINYD
FPSQAKIFVHRVGRTARAGRTGWSYSLVRDSDAPYLLDLQLFLGRRLVLGREHGDQVNFAEDVVVGGFPRDGLSQ
SCEWVNKVLDDTVDIAAQRSVASKGEKLYLRTRNAASLESAKRSKEVVSSDNWTALHPLFNDETSQLEAEREKML
ARIGGYRPNETIFEVNNRRSGKPENEEALTTIKRVRTTLDSKKKRAQEAKSEFVDDDVPTKSGDADADDAEDGAF
SDEDEAGEGAADNMSLASESDLEVTFSSYNQPSNKKAKKEAGATSFQNPEYFMSYTPNNTNMAEDRAYGVHSGTN
ANFAQASRDAAMDLLGDEGSRGFGEPRTMMRWDKRHKKYVSRQNDEDGSKGTRLVRGESGAKIAASFRSGRFDAW
KKGKRLTRLPRVGEAETPGLGADLNHYRGGRRFKHNKEQAPKRADPLRGDYDKMKKKNEAAKERQLGKFGGAAAG
GKSELKGTDDIRLARNLKQKRREKNARPSRKK*
Coding >Ani_SJS100_1|g306.t1
ATGCCTGGTCGTGCCGCTTCTCCGGCCATGTCGGAGAATGAATTCGACATCACCAATGCGCTGTTTCAAAATGAC
AGCGACTCCGACAACGAGGCCCCCGCGAAGCAAGCCAAGCGACAACCGAAGGCGGCGGCTCCCCAGCAGCTCGAT
TTTCTGAACGGCGGCGGCGATGACGACGACGAAGATGACGAGGCGTTTATCGCGGAGACGCAGGCGTCTGCGAAC
CGAAAGGCGTCGAATTTGAAGGGTCGCACGGTGAAGAAGGGTGGTGGTTTCCAGGCCATGGGGCTGAATGCGAAC
TTGTTGAAGGCCATCACAAGGAAGGGTTTCTCGGTGCCGACACCTATTCAGCGCAAGACGATCCCAGTGATTATG
GAGGATCAGGATGTCGTGGGCATGGCGCGCACGGGTTCCGGAAAGACCGCTGCGTTCGTCATTCCCATGATTCAG
AAGTTGAAGAGCCATAGCACCCAGGTTGGAGCCCGTGGGCTGATCTTGTCGCCGTCGCGTGAGTTGGCGCTGCAG
ACTTTGAAGGTCGTGAAGGAGCTTGGTAAGGGGACGGATCTCAAGGCGGTGTTGTTGGTTGGTGGTGATAGTTTG
GAGGAACAGTTCTCGATGATGGCTGGTAACCCCGATATTGTGATTGCGACGCCCGGTCGGTTCCTGCACTTGAAG
GTCGAAATGAACCTCGATTTGTCGAGTATCCGTTATGTTGTGTTCGATGAGGCCGATCGCCTGTTCGAAATGGGT
TTCGCTGCTCAGTTGACCGAAATTCTTCACGGCTTGCCGTCTACTCGCCAGACCCTGCTTTTCTCGGCTACCCTT
CCCAAATCCCTGGTGGAATTCGCGCGCGCTGGTCTGCAGGAGCCTACGCTCGTTCGTTTGGATACTGAGAGCAAG
ATCTCGCCGGATCTGCAGAATGCGTTCTTCTCTGTCAAGTCCGGAGACAAGGAGGGCGCGCTGATGTATATCCTC
CACAACGTGATTAAGATGCCTACGGGTCCGACGGAGGCCGCGCAGCGCATGAAGGAAGAGAACGCCAGTGGAAAG
AGCTCGAAGTTCTCGAAGAAGCGGAAGCGATCGGACGACAAAGCAATCAACTTTAAGGAGTCGCCCACGAAGCAT
TCCACGATCATTTTCGCCGCTACCAAGCACCACGTCGACTACTTGTACTCTCTGCTGAACGAAGCCGGATTTGCG
ACATCCTACGCTTACGGTTCCCTCGACCAGACGGCTCGTAAAATCCAAGTGCACAACTTCCGTACCGGCATTTCG
AACATCCTGGTCGTCACTGACGTCGCAGCCAGAGGTATCGATATTCCCATTCTGGCCAATGTCATCAACTACGAC
TTTCCCTCCCAAGCCAAGATCTTCGTCCACCGTGTCGGTCGTACCGCGCGTGCTGGCCGCACCGGTTGGAGTTAC
AGTCTGGTCCGCGATTCCGATGCCCCCTATCTGCTCGATCTGCAGCTGTTCCTCGGCCGGCGACTGGTCCTCGGC
CGGGAGCATGGCGACCAAGTCAACTTCGCCGAGGATGTGGTCGTCGGAGGCTTCCCCCGCGACGGCCTGTCTCAG
AGCTGCGAGTGGGTGAACAAGGTCTTGGACGATACGGTAGATATCGCCGCGCAGCGTTCCGTCGCCAGCAAGGGT
GAAAAGCTCTACTTGCGCACGCGTAACGCCGCGTCTCTGGAGAGTGCCAAGCGCTCGAAAGAGGTCGTTTCATCC
GACAATTGGACGGCCCTGCACCCCCTGTTCAACGACGAGACCAGTCAACTCGAAGCCGAGCGCGAGAAGATGCTG
GCCCGCATCGGAGGCTACCGGCCGAATGAGACTATCTTCGAAGTGAACAACCGCCGCAGCGGCAAGCCCGAGAAC
GAGGAGGCGCTCACGACAATCAAGCGCGTCCGAACCACGCTCGACTCGAAGAAGAAGCGCGCCCAGGAAGCGAAA
TCGGAATTCGTCGACGACGACGTCCCCACCAAGTCCGGAGACGCTGACGCCGACGACGCCGAAGATGGTGCCTTC
TCCGACGAAGACGAAGCCGGCGAAGGCGCCGCCGACAACATGTCACTTGCATCGGAATCCGACCTCGAAGTTACC
TTCTCCTCCTACAACCAGCCCAGCAATAAGAAGGCCAAGAAAGAAGCCGGTGCCACCTCCTTCCAGAACCCCGAA
TACTTCATGTCCTACACCCCCAACAACACCAACATGGCCGAAGACCGCGCGTACGGTGTGCACTCCGGCACCAAC
GCCAACTTCGCACAGGCATCCCGCGACGCAGCCATGGATCTGCTCGGCGATGAAGGCAGCCGCGGGTTCGGCGAG
CCTCGCACCATGATGCGCTGGGACAAGCGTCACAAGAAGTACGTGTCGCGACAGAACGACGAGGACGGATCGAAG
GGTACTCGTCTGGTGCGTGGTGAGAGTGGTGCCAAGATCGCCGCCAGCTTCCGCAGTGGACGCTTCGACGCCTGG
AAGAAGGGCAAGCGACTGACTCGTCTGCCGCGTGTGGGTGAGGCCGAGACACCGGGTCTGGGGGCGGACCTGAAC
CACTACCGCGGTGGTAGACGCTTCAAGCATAACAAGGAGCAGGCGCCGAAGCGGGCTGATCCGCTCCGCGGAGAT
TATGATAAGATGAAGAAGAAGAATGAGGCAGCCAAGGAGCGCCAGTTGGGCAAGTTCGGAGGAGCCGCGGCGGGC
GGTAAGAGTGAGCTGAAGGGTACGGATGATATTCGGTTAGCCAGGAATTTGAAGCAGAAGAGACGCGAGAAGAAT
GCTCGACCGTCGAGGAAGAAGTAG
Transcript >Ani_SJS100_1|g306.t1
ATGCCTGGTCGTGCCGCTTCTCCGGCCATGTCGGAGAATGAATTCGACATCACCAATGCGCTGTTTCAAAATGAC
AGCGACTCCGACAACGAGGCCCCCGCGAAGCAAGCCAAGCGACAACCGAAGGCGGCGGCTCCCCAGCAGCTCGAT
TTTCTGAACGGCGGCGGCGATGACGACGACGAAGATGACGAGGCGTTTATCGCGGAGACGCAGGCGTCTGCGAAC
CGAAAGGCGTCGAATTTGAAGGGTCGCACGGTGAAGAAGGGTGGTGGTTTCCAGGCCATGGGGCTGAATGCGAAC
TTGTTGAAGGCCATCACAAGGAAGGGTTTCTCGGTGCCGACACCTATTCAGCGCAAGACGATCCCAGTGATTATG
GAGGATCAGGATGTCGTGGGCATGGCGCGCACGGGTTCCGGAAAGACCGCTGCGTTCGTCATTCCCATGATTCAG
AAGTTGAAGAGCCATAGCACCCAGGTTGGAGCCCGTGGGCTGATCTTGTCGCCGTCGCGTGAGTTGGCGCTGCAG
ACTTTGAAGGTCGTGAAGGAGCTTGGTAAGGGGACGGATCTCAAGGCGGTGTTGTTGGTTGGTGGTGATAGTTTG
GAGGAACAGTTCTCGATGATGGCTGGTAACCCCGATATTGTGATTGCGACGCCCGGTCGGTTCCTGCACTTGAAG
GTCGAAATGAACCTCGATTTGTCGAGTATCCGTTATGTTGTGTTCGATGAGGCCGATCGCCTGTTCGAAATGGGT
TTCGCTGCTCAGTTGACCGAAATTCTTCACGGCTTGCCGTCTACTCGCCAGACCCTGCTTTTCTCGGCTACCCTT
CCCAAATCCCTGGTGGAATTCGCGCGCGCTGGTCTGCAGGAGCCTACGCTCGTTCGTTTGGATACTGAGAGCAAG
ATCTCGCCGGATCTGCAGAATGCGTTCTTCTCTGTCAAGTCCGGAGACAAGGAGGGCGCGCTGATGTATATCCTC
CACAACGTGATTAAGATGCCTACGGGTCCGACGGAGGCCGCGCAGCGCATGAAGGAAGAGAACGCCAGTGGAAAG
AGCTCGAAGTTCTCGAAGAAGCGGAAGCGATCGGACGACAAAGCAATCAACTTTAAGGAGTCGCCCACGAAGCAT
TCCACGATCATTTTCGCCGCTACCAAGCACCACGTCGACTACTTGTACTCTCTGCTGAACGAAGCCGGATTTGCG
ACATCCTACGCTTACGGTTCCCTCGACCAGACGGCTCGTAAAATCCAAGTGCACAACTTCCGTACCGGCATTTCG
AACATCCTGGTCGTCACTGACGTCGCAGCCAGAGGTATCGATATTCCCATTCTGGCCAATGTCATCAACTACGAC
TTTCCCTCCCAAGCCAAGATCTTCGTCCACCGTGTCGGTCGTACCGCGCGTGCTGGCCGCACCGGTTGGAGTTAC
AGTCTGGTCCGCGATTCCGATGCCCCCTATCTGCTCGATCTGCAGCTGTTCCTCGGCCGGCGACTGGTCCTCGGC
CGGGAGCATGGCGACCAAGTCAACTTCGCCGAGGATGTGGTCGTCGGAGGCTTCCCCCGCGACGGCCTGTCTCAG
AGCTGCGAGTGGGTGAACAAGGTCTTGGACGATACGGTAGATATCGCCGCGCAGCGTTCCGTCGCCAGCAAGGGT
GAAAAGCTCTACTTGCGCACGCGTAACGCCGCGTCTCTGGAGAGTGCCAAGCGCTCGAAAGAGGTCGTTTCATCC
GACAATTGGACGGCCCTGCACCCCCTGTTCAACGACGAGACCAGTCAACTCGAAGCCGAGCGCGAGAAGATGCTG
GCCCGCATCGGAGGCTACCGGCCGAATGAGACTATCTTCGAAGTGAACAACCGCCGCAGCGGCAAGCCCGAGAAC
GAGGAGGCGCTCACGACAATCAAGCGCGTCCGAACCACGCTCGACTCGAAGAAGAAGCGCGCCCAGGAAGCGAAA
TCGGAATTCGTCGACGACGACGTCCCCACCAAGTCCGGAGACGCTGACGCCGACGACGCCGAAGATGGTGCCTTC
TCCGACGAAGACGAAGCCGGCGAAGGCGCCGCCGACAACATGTCACTTGCATCGGAATCCGACCTCGAAGTTACC
TTCTCCTCCTACAACCAGCCCAGCAATAAGAAGGCCAAGAAAGAAGCCGGTGCCACCTCCTTCCAGAACCCCGAA
TACTTCATGTCCTACACCCCCAACAACACCAACATGGCCGAAGACCGCGCGTACGGTGTGCACTCCGGCACCAAC
GCCAACTTCGCACAGGCATCCCGCGACGCAGCCATGGATCTGCTCGGCGATGAAGGCAGCCGCGGGTTCGGCGAG
CCTCGCACCATGATGCGCTGGGACAAGCGTCACAAGAAGTACGTGTCGCGACAGAACGACGAGGACGGATCGAAG
GGTACTCGTCTGGTGCGTGGTGAGAGTGGTGCCAAGATCGCCGCCAGCTTCCGCAGTGGACGCTTCGACGCCTGG
AAGAAGGGCAAGCGACTGACTCGTCTGCCGCGTGTGGGTGAGGCCGAGACACCGGGTCTGGGGGCGGACCTGAAC
CACTACCGCGGTGGTAGACGCTTCAAGCATAACAAGGAGCAGGCGCCGAAGCGGGCTGATCCGCTCCGCGGAGAT
TATGATAAGATGAAGAAGAAGAATGAGGCAGCCAAGGAGCGCCAGTTGGGCAAGTTCGGAGGAGCCGCGGCGGGC
GGTAAGAGTGAGCTGAAGGGTACGGATGATATTCGGTTAGCCAGGAATTTGAAGCAGAAGAGACGCGAGAAGAAT
GCTCGACCGTCGAGGAAGAAGTAG
Gene >Ani_SJS100_1|g306.t1
ATGCCTGGTCGTGCCGCTTCTCCGGCCATGTCGGAGAATGAATTCGACATCACCAATGCGCTGTTTCAAAATGAC
AGCGACTCCGACAACGAGGCCCCCGCGAAGCAAGCCAAGCGACAACCGAAGGCGGCGGCTCCCCAGCAGCTCGAT
TTTCTGAACGGCGGCGGCGATGACGACGACGAAGATGACGAGGCGTTTATCGCGGAGACGCAGGCGTCTGCGAAC
CGAAAGGCGTCGAATTTGAAGGGTCGCACGGTGAAGAAGGGTGGTGGTTTCCAGGCCATGGGGCTGAATGCGAAC
TTGTTGAAGGCCATCACAAGGAAGGGTTTCTCGGTGCCGACACCTATTCAGCGCAAGACGATCCCAGTGATTATG
GAGGATCAGGATGTCGTGGGCATGGCGCGCACGGGTTCCGGAAAGACCGCTGCGTTCGTCATTCCCATGATTCAG
AAGTTGAAGAGCCATAGCACCCAGGTTGGAGCCCGTGGGCTGATCTTGTCGCCGTCGCGTGAGTTGGCGCTGCAG
ACTTTGAAGGTCGTGAAGGAGCTTGGTAAGGGGACGGATCTCAAGGCGGTGTTGTTGGTTGGTGGTGATAGTTTG
GAGGAACAGTTCTCGATGATGGCTGGTAACCCCGATATTGTGATTGCGACGCCCGGTCGGTTCCTGCACTTGAAG
GTCGAAATGAACCTCGATTTGTCGAGTATCCGTTATGTTGTGTTCGATGAGGCCGATCGCCTGTTCGAAATGGGT
TTCGCTGCTCAGTTGACCGAAATTCTTCACGGCTTGCCGTCTACTCGCCAGACCCTGCTTTTCTCGGCTACCCTT
CCCAAATCCCTGGTGGAATTCGCGCGCGCTGGTCTGCAGGAGCCTACGCTCGTTCGTTTGGATACTGAGAGCAAG
ATCTCGCCGGATCTGCAGAATGCGTTCTTCTCTGTCAAGTCCGGAGACAAGGAGGGCGCGCTGATGTATATCCTC
CACAACGTGATTAAGATGCCTACGGGTCCGACGGAGGCCGCGCAGCGCATGAAGGAAGAGAACGCCAGTGGAAAG
AGCTCGAAGTTCTCGAAGAAGCGGAAGCGATCGGACGACAAAGCAATCAACTTTAAGGAGTCGCCCACGAAGCAT
TCCACGATCATTTTCGCCGCTACCAAGCACCACGTCGACTACTTGTACTCTCTGCTGAACGAAGCCGGATTTGCG
ACATCCTACGCTTACGGTTCCCTCGACCAGACGGCTCGTAAAATCCAAGTGCACAACTTCCGTACCGGCATTTCG
AACATCCTGGTCGTCACTGACGTCGCAGCCAGAGGTATCGATATTCCCATTCTGGCCAATGTCATCAACTACGAC
TTTCCCTCCCAAGCCAAGATCTTCGTCCACCGTGTCGGTCGTACCGCGCGTGCTGGCCGCACCGGTTGGAGTTAC
AGTCTGGTCCGCGATTCCGATGCCCCCTATCTGCTCGATCTGCAGCTGTTCCTCGGCCGGCGACTGGTCCTCGGC
CGGGAGCATGGCGACCAAGTCAACTTCGCCGAGGATGTGGTCGTCGGAGGCTTCCCCCGCGACGGCCTGTCTCAG
AGCTGCGAGTGGGTGAACAAGGTCTTGGACGATACGGTAGATATCGCCGCGCAGCGTTCCGTCGCCAGCAAGGGT
GAAAAGCTCTACTTGCGCACGCGTAACGCCGCGTCTCTGGAGAGTGCCAAGCGCTCGAAAGAGGTCGTTTCATCC
GACAATTGGACGGCCCTGCACCCCCTGTTCAACGACGAGACCAGTCAACTCGAAGCCGAGCGCGAGAAGATGCTG
GCCCGCATCGGAGGCTACCGGCCGAATGAGACTATCTTCGAAGTGAACAACCGCCGCAGCGGCAAGCCCGAGAAC
GAGGAGGCGCTCACGACAATCAAGCGCGTCCGAACCACGCTCGACTCGAAGAAGAAGCGCGCCCAGGAAGCGAAA
TCGGAATTCGTCGACGACGACGTCCCCACCAAGTCCGGAGACGCTGACGCCGACGACGCCGAAGATGGTGCCTTC
TCCGACGAAGACGAAGCCGGCGAAGGCGCCGCCGACAACATGTCACTTGCATCGGAATCCGACCTCGAAGTTACC
TTCTCCTCCTACAACCAGCCCAGCAATAAGAAGGCCAAGAAAGAAGCCGGTGCCACCTCCTTCCAGAACCCCGAA
TACTTCATGTCCTACACCCCCAACAACACCAACATGGCCGAAGACCGCGCGTACGGTGTGCACTCCGGCACCAAC
GCCAACTTCGCACAGGCATCCCGCGACGCAGCCATGGATCTGCTCGGCGATGAAGGCAGCCGCGGGTTCGGCGAG
CCTCGCACCATGATGCGCTGGGACAAGCGTCACAAGAAGTACGTGTCGCGACAGAACGACGAGGACGGATCGAAG
GGTACTCGTCTGGTGCGTGGTGAGAGTGGTGCCAAGATCGCCGCCAGCTTCCGCAGTGGACGCTTCGACGCCTGG
AAGAAGGGCAAGCGACTGACTCGTCTGCCGCGTGTGGGTGAGGCCGAGACACCGGGTCTGGGGGCGGACCTGAAC
CACTACCGCGGTGGTAGACGCTTCAAGCATAACAAGGAGCAGGCGCCGAAGCGGGCTGATCCGCTCCGCGGAGAT
TATGATAAGATGAAGAAGAAGAATGAGGCAGCCAAGGAGCGCCAGTTGGGCAAGTTCGGAGGAGCCGCGGCGGGC
GGTAAGAGTGAGCTGAAGGGTACGGATGATATTCGGTTAGCCAGGAATTTGAAGCAGAAGAGACGCGAGAAGAAT
GCTCGACCGTCGAGGAAGAAGTAG

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