© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g3046.t1 |
| Gene name | |
| Location | scaffold_013:327793..328707 |
| Strand | - |
| Gene length (bp) | 914 |
| Transcript length (bp) | 840 |
| Coding sequence length (bp) | 840 |
| Protein length (aa) | 280 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00188 | CAP | Cysteine-rich secretory protein family | 5.8E-16 | 70 | 174 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 36 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 10 | 32 | 22 |
| 2 | 261 | 278 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g3046.t1 MLHRTSVSRIVPPTQIFSITTTLIILLSALTLTTAQQPKSTVIITIIAPPTTTQQPPSYTSPALFQSSILDVSNT YRKAHNASNLIWNTTLTQYALDWAQGCKWQHSNGPYGENLAFGYPNVSSAVAAWGDEVQKYNFQEPTGFTEETGH FTQLVWRETREVGCAAIDCGYNNTNTTNDNDNGNGKRSDGGGGGGGGINGTERPQGWYVVCEYSPRGNIIGGNKK LGDKEFFKINVQPSSTYSGPYNTGSAGNGAARVECIMGLWWVVLGWWLVLLTFG* |
| Coding | >Ani_SJS100_1|g3046.t1 ATGCTCCATCGTACTAGTGTCTCGAGGATAGTACCACCAACCCAGATCTTCTCCATCACCACCACACTCATAATC CTCCTAAGCGCCCTCACCCTCACCACAGCCCAACAACCAAAATCAACCGTAATAATCACCATAATAGCACCACCA ACCACCACCCAACAACCCCCATCTTACACCTCCCCGGCGCTCTTTCAATCCTCCATCCTAGACGTCAGCAACACC TACCGCAAAGCTCACAACGCAAGCAACCTAATCTGGAACACGACGTTGACTCAGTACGCTCTCGATTGGGCACAG GGTTGTAAATGGCAGCATTCGAACGGCCCCTACGGCGAGAACCTCGCCTTCGGGTACCCCAACGTCTCGTCTGCC GTAGCCGCCTGGGGTGACGAAGTCCAAAAGTACAATTTCCAGGAACCGACGGGGTTCACGGAGGAGACGGGACAT TTTACGCAGTTGGTGTGGAGGGAGACGAGGGAGGTGGGGTGTGCGGCTATTGATTGTGGATATAACAATACTAAC ACTACTAATGATAATGATAATGGGAATGGGAAGAGAAGTGATGGTGGAGGCGGAGGAGGTGGTGGGATAAATGGA ACGGAGAGACCGCAGGGATGGTATGTCGTTTGTGAATACTCGCCTAGGGGCAATATCATTGGGGGCAATAAGAAA TTGGGGGATAAGGAGTTCTTTAAGATTAACGTGCAGCCGTCGAGTACTTATTCCGGGCCGTATAATACGGGATCG GCTGGAAATGGGGCCGCGAGGGTGGAATGTATAATGGGATTATGGTGGGTTGTGTTGGGGTGGTGGTTGGTGTTG CTGACTTTTGGATAG |
| Transcript | >Ani_SJS100_1|g3046.t1 ATGCTCCATCGTACTAGTGTCTCGAGGATAGTACCACCAACCCAGATCTTCTCCATCACCACCACACTCATAATC CTCCTAAGCGCCCTCACCCTCACCACAGCCCAACAACCAAAATCAACCGTAATAATCACCATAATAGCACCACCA ACCACCACCCAACAACCCCCATCTTACACCTCCCCGGCGCTCTTTCAATCCTCCATCCTAGACGTCAGCAACACC TACCGCAAAGCTCACAACGCAAGCAACCTAATCTGGAACACGACGTTGACTCAGTACGCTCTCGATTGGGCACAG GGTTGTAAATGGCAGCATTCGAACGGCCCCTACGGCGAGAACCTCGCCTTCGGGTACCCCAACGTCTCGTCTGCC GTAGCCGCCTGGGGTGACGAAGTCCAAAAGTACAATTTCCAGGAACCGACGGGGTTCACGGAGGAGACGGGACAT TTTACGCAGTTGGTGTGGAGGGAGACGAGGGAGGTGGGGTGTGCGGCTATTGATTGTGGATATAACAATACTAAC ACTACTAATGATAATGATAATGGGAATGGGAAGAGAAGTGATGGTGGAGGCGGAGGAGGTGGTGGGATAAATGGA ACGGAGAGACCGCAGGGATGGTATGTCGTTTGTGAATACTCGCCTAGGGGCAATATCATTGGGGGCAATAAGAAA TTGGGGGATAAGGAGTTCTTTAAGATTAACGTGCAGCCGTCGAGTACTTATTCCGGGCCGTATAATACGGGATCG GCTGGAAATGGGGCCGCGAGGGTGGAATGTATAATGGGATTATGGTGGGTTGTGTTGGGGTGGTGGTTGGTGTTG CTGACTTTTGGATAG |
| Gene | >Ani_SJS100_1|g3046.t1 ATGCTCCATCGTACTAGTGTCTCGAGGATAGTACCACCAACCCAGATCTTCTCCATCACCACCACACTCATAATC CTCCTAAGCGCCCTCACCCTCACCACAGCCCAACAACCAAAATCAACCGTAATAATCACCATAATAGCACCACCA ACCACCACCCAACAACCCCCATCTTACACCTCCCCGGCGCTCTTTCAATCCTCCATCCTAGACGTCAGCAACACC TACCGCAAAGCTCACAACGCAAGCAACCTAATCTGGAACACGACGTTGACTCAGTACGCTCTCGATTGGGCACAG GGTTGTAAATGGCAGCATTCGGTATACCCTTCCCCTCCCTTTCCCCCAAGATATGAATACACTGGAACGAAAAAT AGCTAATAAGTAATGTACAGAACGGCCCCTACGGCGAGAACCTCGCCTTCGGGTACCCCAACGTCTCGTCTGCCG TAGCCGCCTGGGGTGACGAAGTCCAAAAGTACAATTTCCAGGAACCGACGGGGTTCACGGAGGAGACGGGACATT TTACGCAGTTGGTGTGGAGGGAGACGAGGGAGGTGGGGTGTGCGGCTATTGATTGTGGATATAACAATACTAACA CTACTAATGATAATGATAATGGGAATGGGAAGAGAAGTGATGGTGGAGGCGGAGGAGGTGGTGGGATAAATGGAA CGGAGAGACCGCAGGGATGGTATGTCGTTTGTGAATACTCGCCTAGGGGCAATATCATTGGGGGCAATAAGAAAT TGGGGGATAAGGAGTTCTTTAAGATTAACGTGCAGCCGTCGAGTACTTATTCCGGGCCGTATAATACGGGATCGG CTGGAAATGGGGCCGCGAGGGTGGAATGTATAATGGGATTATGGTGGGTTGTGTTGGGGTGGTGGTTGGTGTTGC TGACTTTTGGATAG |