Protein ID | Ani_SJS100_1|g3035.t1 |
Gene name | |
Location | scaffold_013:292373..293675 |
Strand | + |
Gene length (bp) | 1302 |
Transcript length (bp) | 1302 |
Coding sequence length (bp) | 1302 |
Protein length (aa) | 434 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04666 | Glyco_transf_54 | N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region | 3.7E-06 | 81 | 237 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 34 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 12 | 33 | 21 |
2 | 254 | 273 | 19 |
3 | 286 | 308 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g3035.t1 MALNHFNRKQRLLLSSFAILFFFLVVLCHFRSARDPGSFFFQPTEGYRPGYSLQRINESLEWLSAFNRSDAAPSR PVSHVSPPREKTACVGIVTVKRPLQQDLDTTIASILDTLSPEQRAALTVQVLFALSKPSDHPDYNQTWVSNVVDR VLTYDDVDAPGYIIMNLEKKNNIKKKSLIDYRLGLQACYDMTDAPWIIMLEDDVVAQRDWYEHTMRSVQQVEDWR RHDTIRDWLYLRLFYTEKFLGWNSENWPIYLSWSVLLVSLCASAGMYTRRKIRSTQGILTNSFLLVVCFFCVPLL ITLFFLAGRVTWYPMQNGVHVMNAHGCCSQALLFNRENVPALLEYFEHMEDVVPTKAVDSVIEMQAGRAELDRLA ISPSQMQHVGAVSYKEKKKSWKWEGPYRVKGAHGVWSMGFEQAYETDMDQLFQMDGSA* |
Coding | >Ani_SJS100_1|g3035.t1 ATGGCTCTCAATCACTTCAACAGAAAGCAGAGGCTGCTTCTGTCCTCTTTCGCCATCCTATTTTTCTTCCTTGTC GTCCTCTGTCACTTTCGGTCCGCCCGTGACCCAGGCTCGTTCTTCTTCCAGCCCACCGAAGGCTATCGCCCGGGA TACAGTCTTCAGCGTATTAACGAATCGCTGGAGTGGCTGTCAGCCTTTAATCGCTCCGATGCTGCCCCGTCCCGG CCCGTCTCCCATGTCAGCCCGCCGCGAGAGAAAACTGCCTGTGTAGGCATCGTCACCGTGAAGCGTCCCCTGCAG CAGGACCTCGACACTACCATTGCTTCGATTCTTGATACCCTTTCACCGGAGCAGCGGGCCGCGCTGACCGTCCAA GTGCTCTTTGCCTTGAGCAAACCCTCCGACCACCCGGACTACAACCAGACATGGGTATCAAATGTCGTTGACCGC GTGCTCACCTACGACGATGTCGACGCGCCCGGGTATATCATAATGAACTTGGAGAAGAAGAACAACATAAAGAAG AAATCTCTGATTGACTACCGACTCGGGCTACAGGCATGCTACGACATGACCGATGCGCCATGGATCATCATGCTG GAGGACGACGTTGTGGCTCAGCGCGATTGGTACGAGCATACTATGCGCAGCGTTCAACAGGTAGAAGACTGGCGC CGACACGATACGATCAGGGACTGGCTATACCTGCGGCTCTTCTACACGGAGAAGTTTCTCGGCTGGAACTCGGAG AATTGGCCCATCTACCTGTCCTGGAGTGTGCTGCTGGTCTCCCTTTGCGCCAGTGCGGGCATGTACACTCGACGA AAGATTCGCTCTACGCAGGGCATCCTCACCAACTCGTTCCTGTTGGTAGTCTGCTTCTTCTGCGTGCCGCTACTG ATCACCCTCTTCTTCCTGGCCGGTCGGGTGACCTGGTACCCGATGCAGAATGGGGTGCACGTAATGAACGCGCAC GGCTGCTGCTCGCAGGCCCTTCTCTTCAATCGCGAGAATGTTCCAGCCCTCCTGGAGTACTTCGAGCACATGGAG GACGTGGTCCCCACCAAGGCGGTGGACAGCGTGATTGAGATGCAGGCGGGGCGGGCCGAGCTGGACCGACTGGCC ATCTCCCCGTCGCAGATGCAGCACGTCGGAGCAGTCTCGTACAAGGAGAAGAAGAAGTCGTGGAAGTGGGAGGGA CCGTATCGCGTCAAGGGAGCGCATGGGGTCTGGAGTATGGGATTTGAGCAGGCGTACGAGACGGATATGGATCAA TTATTCCAGATGGACGGTTCGGCATGA |
Transcript | >Ani_SJS100_1|g3035.t1 ATGGCTCTCAATCACTTCAACAGAAAGCAGAGGCTGCTTCTGTCCTCTTTCGCCATCCTATTTTTCTTCCTTGTC GTCCTCTGTCACTTTCGGTCCGCCCGTGACCCAGGCTCGTTCTTCTTCCAGCCCACCGAAGGCTATCGCCCGGGA TACAGTCTTCAGCGTATTAACGAATCGCTGGAGTGGCTGTCAGCCTTTAATCGCTCCGATGCTGCCCCGTCCCGG CCCGTCTCCCATGTCAGCCCGCCGCGAGAGAAAACTGCCTGTGTAGGCATCGTCACCGTGAAGCGTCCCCTGCAG CAGGACCTCGACACTACCATTGCTTCGATTCTTGATACCCTTTCACCGGAGCAGCGGGCCGCGCTGACCGTCCAA GTGCTCTTTGCCTTGAGCAAACCCTCCGACCACCCGGACTACAACCAGACATGGGTATCAAATGTCGTTGACCGC GTGCTCACCTACGACGATGTCGACGCGCCCGGGTATATCATAATGAACTTGGAGAAGAAGAACAACATAAAGAAG AAATCTCTGATTGACTACCGACTCGGGCTACAGGCATGCTACGACATGACCGATGCGCCATGGATCATCATGCTG GAGGACGACGTTGTGGCTCAGCGCGATTGGTACGAGCATACTATGCGCAGCGTTCAACAGGTAGAAGACTGGCGC CGACACGATACGATCAGGGACTGGCTATACCTGCGGCTCTTCTACACGGAGAAGTTTCTCGGCTGGAACTCGGAG AATTGGCCCATCTACCTGTCCTGGAGTGTGCTGCTGGTCTCCCTTTGCGCCAGTGCGGGCATGTACACTCGACGA AAGATTCGCTCTACGCAGGGCATCCTCACCAACTCGTTCCTGTTGGTAGTCTGCTTCTTCTGCGTGCCGCTACTG ATCACCCTCTTCTTCCTGGCCGGTCGGGTGACCTGGTACCCGATGCAGAATGGGGTGCACGTAATGAACGCGCAC GGCTGCTGCTCGCAGGCCCTTCTCTTCAATCGCGAGAATGTTCCAGCCCTCCTGGAGTACTTCGAGCACATGGAG GACGTGGTCCCCACCAAGGCGGTGGACAGCGTGATTGAGATGCAGGCGGGGCGGGCCGAGCTGGACCGACTGGCC ATCTCCCCGTCGCAGATGCAGCACGTCGGAGCAGTCTCGTACAAGGAGAAGAAGAAGTCGTGGAAGTGGGAGGGA CCGTATCGCGTCAAGGGAGCGCATGGGGTCTGGAGTATGGGATTTGAGCAGGCGTACGAGACGGATATGGATCAA TTATTCCAGATGGACGGTTCGGCATGA |
Gene | >Ani_SJS100_1|g3035.t1 ATGGCTCTCAATCACTTCAACAGAAAGCAGAGGCTGCTTCTGTCCTCTTTCGCCATCCTATTTTTCTTCCTTGTC GTCCTCTGTCACTTTCGGTCCGCCCGTGACCCAGGCTCGTTCTTCTTCCAGCCCACCGAAGGCTATCGCCCGGGA TACAGTCTTCAGCGTATTAACGAATCGCTGGAGTGGCTGTCAGCCTTTAATCGCTCCGATGCTGCCCCGTCCCGG CCCGTCTCCCATGTCAGCCCGCCGCGAGAGAAAACTGCCTGTGTAGGCATCGTCACCGTGAAGCGTCCCCTGCAG CAGGACCTCGACACTACCATTGCTTCGATTCTTGATACCCTTTCACCGGAGCAGCGGGCCGCGCTGACCGTCCAA GTGCTCTTTGCCTTGAGCAAACCCTCCGACCACCCGGACTACAACCAGACATGGGTATCAAATGTCGTTGACCGC GTGCTCACCTACGACGATGTCGACGCGCCCGGGTATATCATAATGAACTTGGAGAAGAAGAACAACATAAAGAAG AAATCTCTGATTGACTACCGACTCGGGCTACAGGCATGCTACGACATGACCGATGCGCCATGGATCATCATGCTG GAGGACGACGTTGTGGCTCAGCGCGATTGGTACGAGCATACTATGCGCAGCGTTCAACAGGTAGAAGACTGGCGC CGACACGATACGATCAGGGACTGGCTATACCTGCGGCTCTTCTACACGGAGAAGTTTCTCGGCTGGAACTCGGAG AATTGGCCCATCTACCTGTCCTGGAGTGTGCTGCTGGTCTCCCTTTGCGCCAGTGCGGGCATGTACACTCGACGA AAGATTCGCTCTACGCAGGGCATCCTCACCAACTCGTTCCTGTTGGTAGTCTGCTTCTTCTGCGTGCCGCTACTG ATCACCCTCTTCTTCCTGGCCGGTCGGGTGACCTGGTACCCGATGCAGAATGGGGTGCACGTAATGAACGCGCAC GGCTGCTGCTCGCAGGCCCTTCTCTTCAATCGCGAGAATGTTCCAGCCCTCCTGGAGTACTTCGAGCACATGGAG GACGTGGTCCCCACCAAGGCGGTGGACAGCGTGATTGAGATGCAGGCGGGGCGGGCCGAGCTGGACCGACTGGCC ATCTCCCCGTCGCAGATGCAGCACGTCGGAGCAGTCTCGTACAAGGAGAAGAAGAAGTCGTGGAAGTGGGAGGGA CCGTATCGCGTCAAGGGAGCGCATGGGGTCTGGAGTATGGGATTTGAGCAGGCGTACGAGACGGATATGGATCAA TTATTCCAGATGGACGGTTCGGCATGA |