Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g3033.t1
Gene name
Location	scaffold_013:288701..289526
Strand	+
Gene length (bp)	825
Transcript length (bp)	747
Coding sequence length (bp)	747
Protein length (aa)	249

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF08566	Pam17	Mitochondrial import protein Pam17	6.0E-68	83	244

GO

GO Term	Description	Terminal node
GO:0001405	PAM complex, Tim23 associated import motor	Yes
GO:0005575	cellular_component	No
GO:0098798	mitochondrial protein-containing complex	No
GO:0032991	protein-containing complex	No
GO:0098800	inner mitochondrial membrane protein complex	No
GO:0098796	membrane protein complex	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	113	135	22
2	150	181	31

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g3033.t1 MHAPSISGMRTAMLSGRLTSKTLGPFAHPSSCTNPLYQALSQTRTASTSSMRVRSTQTLKPTTALRPSTTTTQLP SSLVLRRANSSAAAAAKSETVRLDWDSFFKLRASRRRYSLASSIVSSLFTTVIGVQVLSTQDLESLGAQVMGLDP FVVLGMATAACGAAGWLVGPFVGNAVWGLVYRRYKPAVMVKEKEFFDRIRRFRVDPSSNSIANPVPDYYGEKIGS VQGYRQWLKDQRAYNRKRRHFIV*
Coding	>Ani_SJS100_1\|g3033.t1 ATGCACGCCCCCTCGATCAGCGGGATGCGTACCGCCATGCTGAGCGGACGCCTCACCTCCAAGACGCTGGGCCCC TTCGCCCACCCCAGCAGCTGCACCAACCCGTTGTATCAAGCGCTCTCTCAGACCCGGACCGCAAGCACCTCCTCC ATGCGAGTCCGCAGCACACAGACCCTGAAGCCCACCACAGCTCTGCGTCCCTCGACGACGACAACGCAGCTCCCG AGCTCTCTGGTTCTCCGCCGCGCCAACTCCTCTGCCGCCGCCGCTGCCAAGAGCGAAACCGTCCGTCTCGACTGG GACTCGTTCTTCAAGCTCCGCGCTAGCCGCCGCCGGTACTCGCTCGCCTCGTCGATCGTGAGCTCCCTGTTCACC ACGGTCATTGGTGTGCAGGTTCTCTCGACGCAGGATCTGGAGTCCCTTGGGGCGCAGGTCATGGGTCTTGATCCG TTTGTGGTGCTGGGTATGGCAACGGCGGCGTGCGGTGCGGCGGGTTGGCTTGTCGGTCCGTTTGTGGGGAACGCT GTTTGGGGGTTGGTTTATCGGAGATATAAGCCTGCTGTTATGGTGAAAGAGAAGGAATTCTTCGACCGCATTAGA CGCTTCCGTGTCGACCCGTCGTCCAACTCCATTGCTAACCCCGTTCCTGATTACTATGGTGAGAAGATCGGTAGT GTGCAGGGTTATCGCCAGTGGTTGAAGGATCAGCGGGCGTATAACCGCAAGAGACGTCATTTCATCGTTTAG
Transcript	>Ani_SJS100_1\|g3033.t1 ATGCACGCCCCCTCGATCAGCGGGATGCGTACCGCCATGCTGAGCGGACGCCTCACCTCCAAGACGCTGGGCCCC TTCGCCCACCCCAGCAGCTGCACCAACCCGTTGTATCAAGCGCTCTCTCAGACCCGGACCGCAAGCACCTCCTCC ATGCGAGTCCGCAGCACACAGACCCTGAAGCCCACCACAGCTCTGCGTCCCTCGACGACGACAACGCAGCTCCCG AGCTCTCTGGTTCTCCGCCGCGCCAACTCCTCTGCCGCCGCCGCTGCCAAGAGCGAAACCGTCCGTCTCGACTGG GACTCGTTCTTCAAGCTCCGCGCTAGCCGCCGCCGGTACTCGCTCGCCTCGTCGATCGTGAGCTCCCTGTTCACC ACGGTCATTGGTGTGCAGGTTCTCTCGACGCAGGATCTGGAGTCCCTTGGGGCGCAGGTCATGGGTCTTGATCCG TTTGTGGTGCTGGGTATGGCAACGGCGGCGTGCGGTGCGGCGGGTTGGCTTGTCGGTCCGTTTGTGGGGAACGCT GTTTGGGGGTTGGTTTATCGGAGATATAAGCCTGCTGTTATGGTGAAAGAGAAGGAATTCTTCGACCGCATTAGA CGCTTCCGTGTCGACCCGTCGTCCAACTCCATTGCTAACCCCGTTCCTGATTACTATGGTGAGAAGATCGGTAGT GTGCAGGGTTATCGCCAGTGGTTGAAGGATCAGCGGGCGTATAACCGCAAGAGACGTCATTTCATCGTTTAG
Gene	>Ani_SJS100_1\|g3033.t1 ATGCACGCCCCCTCGATCAGCGGGATGCGTACCGCCATGCTGAGCGGACGCCTCACCTCCAAGACGCTGGGCCCC TTCGCCCACCCCAGCAGCTGCACCAACCCGTTGTATCAAGCGCTCTCTCAGACCCGGACCGCAAGCACCTCCTCC ATGCGAGTCCGCAGCACACAGACCCTGAAGCCCACCACAGCTCTGCGTCCCTCGACGACGACAACGCAGCTCCCG AGCTCTCTGGTTCTCCGCCGCGCCAACTCCTCTGCCGCCGCCGCTGCCAAGAGCGAAACCGTCCGTCTCGACTGG GACTCGTTCTTCAAGCTCCGCGCTAGCCGCCGCCGGTACTCGCTCGCCTCGTCGATCGTGAGCTCCCTGTTCACC ACGGTCATTGGTGTGCAGGTTCTCTCGACGCAGGATCTGGAGTCCCTTGGGGCGCAGGTCATGGGTCTTGATCCG TTTGTGGTGCTGGGTATGGCAACGGCGGCGTGCGGTGCGGCGGGTTGGCTTGTCGGTCCGTTTGTGGGGAACGCT GTTTGGGGGTTGGTTTATCGGAGATATAAGCCTGCTGTTATGGTGGTAAGTTTTTCCATTTCCCTTACCTAAGTT GCTGTTGAGAAGAAACGTGGATACTGATAGTGGTTTGTGTGTGTATAGAAAGAGAAGGAATTCTTCGACCGCATT AGACGCTTCCGTGTCGACCCGTCGTCCAACTCCATTGCTAACCCCGTTCCTGATTACTATGGTGAGAAGATCGGT AGTGTGCAGGGTTATCGCCAGTGGTTGAAGGATCAGCGGGCGTATAACCGCAAGAGACGTCATTTCATCGTTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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