© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g3029.t1 |
| Gene name | |
| Location | scaffold_013:278335..280260 |
| Strand | - |
| Gene length (bp) | 1925 |
| Transcript length (bp) | 1518 |
| Coding sequence length (bp) | 1518 |
| Protein length (aa) | 506 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 2.6E-30 | 70 | 428 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 29 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 105 | 124 | 19 |
| 2 | 131 | 153 | 22 |
| 3 | 157 | 179 | 22 |
| 4 | 192 | 214 | 22 |
| 5 | 224 | 246 | 22 |
| 6 | 298 | 320 | 22 |
| 7 | 324 | 346 | 22 |
| 8 | 353 | 373 | 20 |
| 9 | 378 | 400 | 22 |
| 10 | 413 | 435 | 22 |
| 11 | 445 | 467 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g3029.t1 MAQVDEKPALNNSSRGVVDTEKATTVHGIPEESQLDFFDDPDEGLSEEEKAKIDRALLWKLDLRLIPWLSLLYLI SFLDRTNVGNAKLAGLQGDLHMTNSQYNDSLTIFFVSYAIFEPITNVLLKRWRPSVFIPIIMVVWGICMTCMGLV HNFSRIMAVRWFLGLAEAGLFPGVGYFLSCWYKRSEFGVRMAIFFSAAALAGSFGGLLAAAIALMDGIGGKAGWS WIFILEGLLTIVIGVLSVWMVYDFPDQARFLSEPDRKRVLRRLAADKQASAAYEKFEMTYFWSSLKDWKTYLNAI IYMGSCMPLYAFSLFTPTIINELAQLLSVPPYAAAAIVTVAVGFIADRTGQRGICNIVVSILGIAGFSLLLGASS AGARYAGVFLGAMGIYPAISNTISWASNNAEGVYKRGVTLGIVIGWGNLNGVVSSNIYRGGDAPQFYPGHGAVLA YLVLFLFGGSVVQYVLLRRENAKRRRGDRDHWITGLERQEIEKLGDKRPDFIYTL* |
| Coding | >Ani_SJS100_1|g3029.t1 ATGGCGCAGGTCGACGAGAAACCAGCGTTAAACAATTCCTCACGGGGCGTGGTGGATACAGAAAAGGCTACTACT GTCCACGGTATACCAGAGGAGTCGCAACTGGACTTTTTTGATGATCCGGATGAAGGTTTGAGTGAGGAGGAAAAG GCAAAGATCGATCGTGCATTACTGTGGAAACTTGATTTGCGGCTTATCCCGTGGTTGAGTCTGCTGTACCTGATT TCCTTTTTGGACAGGACGAATGTCGGCAATGCAAAGCTCGCTGGTCTCCAAGGGGACTTGCATATGACCAACTCG CAGTACAACGACTCCTTGACCATTTTCTTCGTGTCATACGCGATCTTCGAACCTATCACCAATGTTCTCCTCAAG CGCTGGCGGCCTAGCGTGTTTATTCCGATTATAATGGTAGTATGGGGCATATGCATGACTTGTATGGGACTCGTA CACAACTTCTCTAGGATCATGGCGGTGCGATGGTTCCTTGGTCTGGCGGAAGCCGGTCTCTTTCCTGGCGTCGGA TACTTCTTATCCTGCTGGTACAAAAGATCCGAATTCGGCGTTCGCATGGCCATCTTCTTCTCCGCCGCTGCTCTT GCGGGGTCGTTCGGCGGATTGCTCGCGGCTGCGATTGCCCTGATGGATGGCATTGGAGGCAAGGCGGGCTGGTCT TGGATCTTCATTCTTGAGGGTCTGCTGACGATCGTCATCGGCGTGCTGTCTGTATGGATGGTCTACGACTTTCCG GACCAGGCCAGATTCTTATCCGAACCGGATCGCAAGCGTGTACTGCGTCGTCTGGCAGCTGACAAGCAAGCCAGT GCTGCGTACGAGAAGTTTGAGATGACGTATTTCTGGAGCAGTCTGAAGGACTGGAAGACCTATCTCAATGCGATC ATCTACATGGGTTCATGCATGCCGCTATATGCATTCTCCCTATTTACCCCCACTATCATCAATGAGCTAGCGCAG CTTCTCAGTGTCCCGCCTTATGCCGCGGCGGCTATCGTCACTGTGGCAGTCGGGTTCATCGCAGATCGGACCGGC CAACGTGGCATCTGCAACATTGTGGTGTCAATCCTCGGTATCGCCGGGTTCTCCTTGCTTCTTGGGGCGAGTTCT GCAGGGGCACGATATGCAGGGGTGTTCCTGGGCGCCATGGGTATCTACCCAGCGATCTCGAACACCATTTCCTGG GCCAGTAACAACGCAGAGGGTGTGTACAAGCGCGGTGTCACGCTGGGTATTGTCATTGGCTGGGGCAACCTGAAC GGCGTCGTGTCGTCCAACATCTACCGCGGCGGAGACGCGCCTCAGTTCTATCCGGGACACGGGGCGGTGCTGGCA TATTTAGTGCTGTTTCTGTTTGGCGGATCAGTAGTGCAGTATGTCCTTCTCCGACGGGAGAACGCGAAACGTCGT CGGGGCGATCGAGACCACTGGATAACAGGACTGGAGAGACAGGAGATCGAGAAGCTTGGAGACAAGCGGCCAGAC TTTATATACACGCTGTAG |
| Transcript | >Ani_SJS100_1|g3029.t1 ATGGCGCAGGTCGACGAGAAACCAGCGTTAAACAATTCCTCACGGGGCGTGGTGGATACAGAAAAGGCTACTACT GTCCACGGTATACCAGAGGAGTCGCAACTGGACTTTTTTGATGATCCGGATGAAGGTTTGAGTGAGGAGGAAAAG GCAAAGATCGATCGTGCATTACTGTGGAAACTTGATTTGCGGCTTATCCCGTGGTTGAGTCTGCTGTACCTGATT TCCTTTTTGGACAGGACGAATGTCGGCAATGCAAAGCTCGCTGGTCTCCAAGGGGACTTGCATATGACCAACTCG CAGTACAACGACTCCTTGACCATTTTCTTCGTGTCATACGCGATCTTCGAACCTATCACCAATGTTCTCCTCAAG CGCTGGCGGCCTAGCGTGTTTATTCCGATTATAATGGTAGTATGGGGCATATGCATGACTTGTATGGGACTCGTA CACAACTTCTCTAGGATCATGGCGGTGCGATGGTTCCTTGGTCTGGCGGAAGCCGGTCTCTTTCCTGGCGTCGGA TACTTCTTATCCTGCTGGTACAAAAGATCCGAATTCGGCGTTCGCATGGCCATCTTCTTCTCCGCCGCTGCTCTT GCGGGGTCGTTCGGCGGATTGCTCGCGGCTGCGATTGCCCTGATGGATGGCATTGGAGGCAAGGCGGGCTGGTCT TGGATCTTCATTCTTGAGGGTCTGCTGACGATCGTCATCGGCGTGCTGTCTGTATGGATGGTCTACGACTTTCCG GACCAGGCCAGATTCTTATCCGAACCGGATCGCAAGCGTGTACTGCGTCGTCTGGCAGCTGACAAGCAAGCCAGT GCTGCGTACGAGAAGTTTGAGATGACGTATTTCTGGAGCAGTCTGAAGGACTGGAAGACCTATCTCAATGCGATC ATCTACATGGGTTCATGCATGCCGCTATATGCATTCTCCCTATTTACCCCCACTATCATCAATGAGCTAGCGCAG CTTCTCAGTGTCCCGCCTTATGCCGCGGCGGCTATCGTCACTGTGGCAGTCGGGTTCATCGCAGATCGGACCGGC CAACGTGGCATCTGCAACATTGTGGTGTCAATCCTCGGTATCGCCGGGTTCTCCTTGCTTCTTGGGGCGAGTTCT GCAGGGGCACGATATGCAGGGGTGTTCCTGGGCGCCATGGGTATCTACCCAGCGATCTCGAACACCATTTCCTGG GCCAGTAACAACGCAGAGGGTGTGTACAAGCGCGGTGTCACGCTGGGTATTGTCATTGGCTGGGGCAACCTGAAC GGCGTCGTGTCGTCCAACATCTACCGCGGCGGAGACGCGCCTCAGTTCTATCCGGGACACGGGGCGGTGCTGGCA TATTTAGTGCTGTTTCTGTTTGGCGGATCAGTAGTGCAGTATGTCCTTCTCCGACGGGAGAACGCGAAACGTCGT CGGGGCGATCGAGACCACTGGATAACAGGACTGGAGAGACAGGAGATCGAGAAGCTTGGAGACAAGCGGCCAGAC TTTATATACACGCTGTAG |
| Gene | >Ani_SJS100_1|g3029.t1 ATGGCGCAGGTCGACGAGAAACCAGCGTTAAACAATTCCTCACGGGGCGTGGTGGATACAGAAAAGGCTACTACT GTCCACGGTATACCAGAGGAGTCGCAACTGGACTTTTTTGATGATCCGGATGAAGGTTTGAGTGAGGAGGAAAAG GCAAAGATCGTGAGTAACCTCCCCTGGTCAACACCAACAGGGATGATGAGCTGGACTAATGCAATTGCCAGGATC GTGCATTACTGTGGAAACTTGATTTGCGGCTTATCCCGTGGTTGAGTCTGCTGTACCTGATTTCCTTTTTGGACA GGTGTGCACAGTTACCCCAATGATCGTCGTAGGAAATTAATCGTGGCTTAAATAGGACGAATGTCGGCAATGCAA AGCTCGCTGGTCTCCAAGGGGACTTGCATATGACCAACTCGCAGTACAACGACTCCTTGACCATTTTCTTCGTGT CATACGCGATCTTCGAACCTATCACCAATGTTCTCCTCAAGCGCTGGCGGCCTAGCGTGTTTATTCCGATTATAA TGGTAGTATGGGTATGGATAATAAAGTCTTATGCAGGTTGACTTGCGCTGATTTTGGGACAGGGCATATGCATGA CTTGTATGGGACTCGTACACAACTTCTCTAGGATCATGGCGGTGAGTGTCTGCATACATATACTATCTTCAAATA AAGGAATTCGCGCGGCGCAATTGATATCCCTGCTGACGGTAGTAGGTGCGATGGTTCCTTGGTCTGGCGGAAGCC GGTCTCTTTCCTGGCGTCGGATACTTCTTATCCTGCTGGTACAAAAGATCCGAATTCGGCGTTCGCATGGCCATC TTCTTCTCCGCCGCTGCTCTTGCGGGGTCGTTCGGCGGATTGCTCGCGGCTGCGATTGCCCTGATGGATGGCATT GGAGGCAAGGCGGGCTGGTCTTGGATCTTCATTCTTGAGGGTCTGCTGACGATCGTCATCGGCGTGCTGTCTGTA TGGATGGTCTACGACTTTCCGGACCAGGCCAGATTCTTATCCGAACCGGATCGCAAGCGTGTACTGCGTCGTCTG GCAGCTGACAAGCAAGCCAGTGCTGCGTACGAGAAGTTTGAGATGACGTATTTCTGGAGCAGTCTGAAGGACTGG AAGACCTATCTCAATGCGATCATCTACATGGGTTCATGCATGCCGCTATATGCATTCTCCCTATTTACCCCCACT ATCATCAATGAGCTAGTATGTCCTCCACAACCTGAGCATATTGCACAGCACTAACAATAGATAGGGTTTGTTTTG ATACTCCTGTGATTCGGTAGGGATCTAACCGGCGCAGGCTATACCGCGATTCAGGCGCAGCTTCTCAGTGTCCCG CCTTATGCCGCGGCGGCTATCGTCACTGTGGCAGTCGGGTTCATCGCAGATCGGACCGGCCAACGTGGCATCTGC AACATTGTGGTGTCAATCCTCGGTATCGCCGGGTTCTCCTTGCTTCTTGGGGCGAGTTCTGCAGGGGCACGATAT GCAGGGGTGTTCCTGGGCGCCATGGGTATCTACCCAGCGATCTCGAACACCATTTCCTGGGCCAGTAACAACGCA GAGGGTATGCATCTCTATTGAATAGTGGATAACCATGGCTGACTGTGGCAGGTGTGTACAAGCGCGGTGTCACGC TGGGTATTGTCATTGGCTGGGGCAACCTGAACGGCGTCGTGTCGTCCAACATCTACCGCGGCGGAGACGCGCCTC AGTTCTATCCGGGACACGGGGCGGTGCTGGCATATTTAGTGCTGTTTCTGTTTGGCGGATCAGTAGTGCAGTATG TCCTTCTCCGACGGGAGAACGCGAAACGTCGTCGGGGCGATCGAGACCACTGGATAACAGGACTGGAGAGACAGG AGATCGAGAAGCTTGGAGACAAGCGGCCAGACTTTATATACACGCTGTAG |