Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g2996.t1
Gene name
Locationscaffold_013:192948..193845
Strand-
Gene length (bp)897
Transcript length (bp)897
Coding sequence length (bp)897
Protein length (aa) 299

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05721 PhyH Phytanoyl-CoA dioxygenase (PhyH) 1.1E-33 34 232

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g2996.t1
MSQLEVPQAAVLRNATALREVTVTTPLDEVFDAWHEDGAIIIKGILSTEQVNQLESELDPLLNKVPEGSRSSDYR
MQAFHGRKTKRAGDITNNSKVFRDYLLDNDFLHAVCKRTFSEGGQAGDYWLGTAATIHVGPHQEPQTLHRDLGSY
PPYKKLGPEGTEAQINFLIATTDFTEANGATRVIPGSNKWAFSERGSPKQTIPAEMQAGDCLLISGKVVHGTGRN
TTDRVRGCLAMTVCASFLTPEEAHPFIVSMETARALSSRAQQFLGFRSQWPRGSPGLWTKDYSELALHLKLDD*
Coding >Ani_SJS100_1|g2996.t1
ATGTCTCAATTGGAAGTTCCTCAAGCGGCAGTCCTAAGAAATGCCACAGCCCTGAGAGAGGTTACTGTGACTACC
CCACTCGACGAAGTCTTTGACGCCTGGCACGAAGACGGGGCAATAATAATCAAGGGTATCCTTTCCACAGAGCAA
GTGAATCAGCTTGAAAGCGAGCTAGATCCCCTTCTGAACAAAGTACCGGAAGGATCGCGGTCATCCGATTATCGC
ATGCAGGCTTTTCACGGCCGCAAGACAAAGCGTGCCGGGGATATCACGAACAACAGCAAAGTCTTTCGCGACTAC
CTACTCGACAACGATTTTCTCCACGCTGTTTGTAAGCGGACCTTCAGTGAAGGTGGTCAAGCCGGTGATTATTGG
CTGGGTACGGCGGCTACTATCCACGTTGGCCCTCATCAAGAACCGCAGACCCTTCACCGTGACCTGGGCAGCTAT
CCGCCTTACAAGAAACTAGGACCGGAAGGCACCGAGGCGCAGATAAACTTTCTCATCGCGACAACTGACTTCACT
GAAGCCAACGGGGCAACCCGTGTGATCCCCGGCAGCAACAAGTGGGCGTTCAGTGAGCGTGGAAGTCCAAAGCAG
ACCATCCCGGCGGAGATGCAGGCAGGTGATTGCCTTTTGATTAGCGGGAAAGTGGTCCATGGTACTGGGAGAAAT
ACGACAGACCGGGTGAGAGGCTGTCTAGCTATGACAGTTTGTGCCAGCTTCCTTACTCCAGAAGAGGCGCATCCA
TTCATTGTCTCAATGGAAACAGCCCGCGCGCTTTCTAGCCGTGCGCAGCAATTTCTGGGATTTCGGTCCCAGTGG
CCTCGTGGTTCGCCCGGTTTGTGGACCAAGGATTACTCTGAGCTAGCTCTACACTTGAAACTTGATGATTAG
Transcript >Ani_SJS100_1|g2996.t1
ATGTCTCAATTGGAAGTTCCTCAAGCGGCAGTCCTAAGAAATGCCACAGCCCTGAGAGAGGTTACTGTGACTACC
CCACTCGACGAAGTCTTTGACGCCTGGCACGAAGACGGGGCAATAATAATCAAGGGTATCCTTTCCACAGAGCAA
GTGAATCAGCTTGAAAGCGAGCTAGATCCCCTTCTGAACAAAGTACCGGAAGGATCGCGGTCATCCGATTATCGC
ATGCAGGCTTTTCACGGCCGCAAGACAAAGCGTGCCGGGGATATCACGAACAACAGCAAAGTCTTTCGCGACTAC
CTACTCGACAACGATTTTCTCCACGCTGTTTGTAAGCGGACCTTCAGTGAAGGTGGTCAAGCCGGTGATTATTGG
CTGGGTACGGCGGCTACTATCCACGTTGGCCCTCATCAAGAACCGCAGACCCTTCACCGTGACCTGGGCAGCTAT
CCGCCTTACAAGAAACTAGGACCGGAAGGCACCGAGGCGCAGATAAACTTTCTCATCGCGACAACTGACTTCACT
GAAGCCAACGGGGCAACCCGTGTGATCCCCGGCAGCAACAAGTGGGCGTTCAGTGAGCGTGGAAGTCCAAAGCAG
ACCATCCCGGCGGAGATGCAGGCAGGTGATTGCCTTTTGATTAGCGGGAAAGTGGTCCATGGTACTGGGAGAAAT
ACGACAGACCGGGTGAGAGGCTGTCTAGCTATGACAGTTTGTGCCAGCTTCCTTACTCCAGAAGAGGCGCATCCA
TTCATTGTCTCAATGGAAACAGCCCGCGCGCTTTCTAGCCGTGCGCAGCAATTTCTGGGATTTCGGTCCCAGTGG
CCTCGTGGTTCGCCCGGTTTGTGGACCAAGGATTACTCTGAGCTAGCTCTACACTTGAAACTTGATGATTAG
Gene >Ani_SJS100_1|g2996.t1
ATGTCTCAATTGGAAGTTCCTCAAGCGGCAGTCCTAAGAAATGCCACAGCCCTGAGAGAGGTTACTGTGACTACC
CCACTCGACGAAGTCTTTGACGCCTGGCACGAAGACGGGGCAATAATAATCAAGGGTATCCTTTCCACAGAGCAA
GTGAATCAGCTTGAAAGCGAGCTAGATCCCCTTCTGAACAAAGTACCGGAAGGATCGCGGTCATCCGATTATCGC
ATGCAGGCTTTTCACGGCCGCAAGACAAAGCGTGCCGGGGATATCACGAACAACAGCAAAGTCTTTCGCGACTAC
CTACTCGACAACGATTTTCTCCACGCTGTTTGTAAGCGGACCTTCAGTGAAGGTGGTCAAGCCGGTGATTATTGG
CTGGGTACGGCGGCTACTATCCACGTTGGCCCTCATCAAGAACCGCAGACCCTTCACCGTGACCTGGGCAGCTAT
CCGCCTTACAAGAAACTAGGACCGGAAGGCACCGAGGCGCAGATAAACTTTCTCATCGCGACAACTGACTTCACT
GAAGCCAACGGGGCAACCCGTGTGATCCCCGGCAGCAACAAGTGGGCGTTCAGTGAGCGTGGAAGTCCAAAGCAG
ACCATCCCGGCGGAGATGCAGGCAGGTGATTGCCTTTTGATTAGCGGGAAAGTGGTCCATGGTACTGGGAGAAAT
ACGACAGACCGGGTGAGAGGCTGTCTAGCTATGACAGTTTGTGCCAGCTTCCTTACTCCAGAAGAGGCGCATCCA
TTCATTGTCTCAATGGAAACAGCCCGCGCGCTTTCTAGCCGTGCGCAGCAATTTCTGGGATTTCGGTCCCAGTGG
CCTCGTGGTTCGCCCGGTTTGTGGACCAAGGATTACTCTGAGCTAGCTCTACACTTGAAACTTGATGATTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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