© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g2966.t1 |
| Gene name | |
| Location | scaffold_013:95174..96631 |
| Strand | - |
| Gene length (bp) | 1457 |
| Transcript length (bp) | 1404 |
| Coding sequence length (bp) | 1404 |
| Protein length (aa) | 468 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF11711 | Tim54 | Inner membrane protein import complex subunit Tim54 | 3.1E-150 | 27 | 407 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 50 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 46 | 63 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g2966.t1 MAESSNSAAASGPAQSAASTSAPKPSNPAFRMLGMPNLRMKLPSRNWMIFFTITGSFAAAVIYDRREKRRAQQKW SDLVAHISKEHLPIEQTRRKINVFLSAPPGDGIRVARDHFKEYVKPILVAAALDYQIIEGRREGDIRAGYAERIR KWRRKAGEPSTVVEDPTVEDVVFAARTQMGVIEEPGPKGDLVIGRHTWKEYIRGLHEGWLGPLDPPPPPPATEDP APVESSTPAAETSSETKEGDANAPEQEKKEEKPAKPVGPTPAYISTSDYSSQPLPRTIPQTLSGSVPIAFPHILG FLNTPIRLYRYLNQRHMAESVGRDVAAIVLASYSRPYNTGSVSSDASPISDDTLGSTTYEQQTVLEEEEKEWHKS VHRKDEANPDKEREWLDDIVIDPRLASRMHRYSVSPEEEARAQRILEGQEYILGQERPVPVSFWKRMWVKYGYGE DEETLRRKPILGNLDEE* |
| Coding | >Ani_SJS100_1|g2966.t1 ATGGCGGAGTCCTCCAATTCCGCCGCGGCCTCAGGCCCGGCCCAGTCCGCAGCGTCTACCAGCGCTCCCAAGCCC TCCAACCCAGCCTTCAGAATGCTTGGAATGCCGAACCTTCGCATGAAACTTCCCTCTCGGAATTGGATGATCTTC TTCACCATCACCGGCTCGTTCGCCGCAGCTGTCATTTACGACCGGAGAGAGAAGCGCCGCGCGCAACAAAAATGG AGTGATCTCGTCGCTCACATCTCCAAGGAGCATCTTCCCATCGAGCAAACCCGACGCAAAATCAACGTCTTCCTG TCCGCGCCACCGGGTGACGGTATCCGCGTGGCTCGCGACCACTTCAAAGAATACGTTAAGCCGATCCTCGTGGCA GCGGCACTAGACTACCAAATCATCGAAGGCAGAAGGGAAGGCGACATCCGTGCTGGTTACGCGGAGCGCATTCGC AAGTGGAGACGTAAGGCAGGCGAACCGAGTACGGTGGTGGAGGACCCCACGGTTGAAGACGTCGTTTTCGCCGCA AGGACGCAGATGGGCGTTATAGAGGAGCCCGGACCGAAGGGTGATTTGGTCATCGGTCGTCACACATGGAAGGAG TACATTCGCGGTCTGCACGAAGGTTGGCTGGGACCTCTTGATCCTCCCCCTCCGCCTCCTGCCACGGAGGATCCC GCTCCTGTGGAGTCCAGCACACCCGCCGCAGAGACCTCCTCTGAGACCAAGGAGGGCGACGCCAACGCCCCCGAG CAGGAAAAGAAGGAAGAGAAGCCTGCTAAACCCGTGGGACCGACACCAGCTTACATCTCCACATCCGACTACTCA TCGCAACCCCTCCCGCGTACTATCCCCCAGACTCTTTCAGGCTCCGTCCCCATCGCCTTCCCCCACATCCTGGGT TTCCTCAACACCCCCATCAGACTCTACCGCTACCTTAACCAGCGCCACATGGCCGAGAGCGTAGGCCGCGACGTC GCAGCCATTGTCCTGGCCTCATACAGCCGCCCTTACAACACCGGCTCCGTCTCCTCGGATGCCTCCCCCATCTCC GACGATACCCTTGGCAGCACCACCTATGAACAACAGACCGTCCTCGAGGAGGAAGAAAAGGAATGGCACAAGTCC GTCCACCGCAAGGACGAAGCCAACCCTGACAAGGAACGCGAGTGGCTCGACGACATCGTCATCGATCCGCGCCTC GCCTCCCGCATGCATCGCTACAGCGTCTCGCCTGAGGAAGAGGCCCGCGCTCAGCGCATCCTCGAAGGCCAGGAA TACATCCTGGGTCAGGAACGCCCTGTTCCTGTGTCGTTCTGGAAGCGCATGTGGGTGAAGTATGGGTACGGAGAG GATGAGGAGACGTTGAGGAGGAAGCCCATCTTGGGCAACCTTGATGAGGAGTAA |
| Transcript | >Ani_SJS100_1|g2966.t1 ATGGCGGAGTCCTCCAATTCCGCCGCGGCCTCAGGCCCGGCCCAGTCCGCAGCGTCTACCAGCGCTCCCAAGCCC TCCAACCCAGCCTTCAGAATGCTTGGAATGCCGAACCTTCGCATGAAACTTCCCTCTCGGAATTGGATGATCTTC TTCACCATCACCGGCTCGTTCGCCGCAGCTGTCATTTACGACCGGAGAGAGAAGCGCCGCGCGCAACAAAAATGG AGTGATCTCGTCGCTCACATCTCCAAGGAGCATCTTCCCATCGAGCAAACCCGACGCAAAATCAACGTCTTCCTG TCCGCGCCACCGGGTGACGGTATCCGCGTGGCTCGCGACCACTTCAAAGAATACGTTAAGCCGATCCTCGTGGCA GCGGCACTAGACTACCAAATCATCGAAGGCAGAAGGGAAGGCGACATCCGTGCTGGTTACGCGGAGCGCATTCGC AAGTGGAGACGTAAGGCAGGCGAACCGAGTACGGTGGTGGAGGACCCCACGGTTGAAGACGTCGTTTTCGCCGCA AGGACGCAGATGGGCGTTATAGAGGAGCCCGGACCGAAGGGTGATTTGGTCATCGGTCGTCACACATGGAAGGAG TACATTCGCGGTCTGCACGAAGGTTGGCTGGGACCTCTTGATCCTCCCCCTCCGCCTCCTGCCACGGAGGATCCC GCTCCTGTGGAGTCCAGCACACCCGCCGCAGAGACCTCCTCTGAGACCAAGGAGGGCGACGCCAACGCCCCCGAG CAGGAAAAGAAGGAAGAGAAGCCTGCTAAACCCGTGGGACCGACACCAGCTTACATCTCCACATCCGACTACTCA TCGCAACCCCTCCCGCGTACTATCCCCCAGACTCTTTCAGGCTCCGTCCCCATCGCCTTCCCCCACATCCTGGGT TTCCTCAACACCCCCATCAGACTCTACCGCTACCTTAACCAGCGCCACATGGCCGAGAGCGTAGGCCGCGACGTC GCAGCCATTGTCCTGGCCTCATACAGCCGCCCTTACAACACCGGCTCCGTCTCCTCGGATGCCTCCCCCATCTCC GACGATACCCTTGGCAGCACCACCTATGAACAACAGACCGTCCTCGAGGAGGAAGAAAAGGAATGGCACAAGTCC GTCCACCGCAAGGACGAAGCCAACCCTGACAAGGAACGCGAGTGGCTCGACGACATCGTCATCGATCCGCGCCTC GCCTCCCGCATGCATCGCTACAGCGTCTCGCCTGAGGAAGAGGCCCGCGCTCAGCGCATCCTCGAAGGCCAGGAA TACATCCTGGGTCAGGAACGCCCTGTTCCTGTGTCGTTCTGGAAGCGCATGTGGGTGAAGTATGGGTACGGAGAG GATGAGGAGACGTTGAGGAGGAAGCCCATCTTGGGCAACCTTGATGAGGAGTAA |
| Gene | >Ani_SJS100_1|g2966.t1 ATGGCGGAGTCCTCCAATTCCGCCGCGGCCTCAGGCCCGGCCCAGTCCGCAGCGTCTACCAGCGCTCCCAAGCCC TCCAACCCAGCCTTCAGAATGCTTGGTACAGATCCCCAATGCCCTCAGCCAGTATCCTTATACCTAATAGTCTTC AAGGAATGCCGAACCTTCGCATGAAACTTCCCTCTCGGAATTGGATGATCTTCTTCACCATCACCGGCTCGTTCG CCGCAGCTGTCATTTACGACCGGAGAGAGAAGCGCCGCGCGCAACAAAAATGGAGTGATCTCGTCGCTCACATCT CCAAGGAGCATCTTCCCATCGAGCAAACCCGACGCAAAATCAACGTCTTCCTGTCCGCGCCACCGGGTGACGGTA TCCGCGTGGCTCGCGACCACTTCAAAGAATACGTTAAGCCGATCCTCGTGGCAGCGGCACTAGACTACCAAATCA TCGAAGGCAGAAGGGAAGGCGACATCCGTGCTGGTTACGCGGAGCGCATTCGCAAGTGGAGACGTAAGGCAGGCG AACCGAGTACGGTGGTGGAGGACCCCACGGTTGAAGACGTCGTTTTCGCCGCAAGGACGCAGATGGGCGTTATAG AGGAGCCCGGACCGAAGGGTGATTTGGTCATCGGTCGTCACACATGGAAGGAGTACATTCGCGGTCTGCACGAAG GTTGGCTGGGACCTCTTGATCCTCCCCCTCCGCCTCCTGCCACGGAGGATCCCGCTCCTGTGGAGTCCAGCACAC CCGCCGCAGAGACCTCCTCTGAGACCAAGGAGGGCGACGCCAACGCCCCCGAGCAGGAAAAGAAGGAAGAGAAGC CTGCTAAACCCGTGGGACCGACACCAGCTTACATCTCCACATCCGACTACTCATCGCAACCCCTCCCGCGTACTA TCCCCCAGACTCTTTCAGGCTCCGTCCCCATCGCCTTCCCCCACATCCTGGGTTTCCTCAACACCCCCATCAGAC TCTACCGCTACCTTAACCAGCGCCACATGGCCGAGAGCGTAGGCCGCGACGTCGCAGCCATTGTCCTGGCCTCAT ACAGCCGCCCTTACAACACCGGCTCCGTCTCCTCGGATGCCTCCCCCATCTCCGACGATACCCTTGGCAGCACCA CCTATGAACAACAGACCGTCCTCGAGGAGGAAGAAAAGGAATGGCACAAGTCCGTCCACCGCAAGGACGAAGCCA ACCCTGACAAGGAACGCGAGTGGCTCGACGACATCGTCATCGATCCGCGCCTCGCCTCCCGCATGCATCGCTACA GCGTCTCGCCTGAGGAAGAGGCCCGCGCTCAGCGCATCCTCGAAGGCCAGGAATACATCCTGGGTCAGGAACGCC CTGTTCCTGTGTCGTTCTGGAAGCGCATGTGGGTGAAGTATGGGTACGGAGAGGATGAGGAGACGTTGAGGAGGA AGCCCATCTTGGGCAACCTTGATGAGGAGTAA |