Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g2938.t1
Gene name
Locationscaffold_013:30509..30969
Strand-
Gene length (bp)460
Transcript length (bp)336
Coding sequence length (bp)336
Protein length (aa) 112

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10183 ESSS ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) 2.2E-18 27 105

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 20 0.45

Transmembrane Domains

Domain # Start End Length
1 61 78 17

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g2938.t1
MSARPLSHCLRARCVPRRAQNIQGFSTRSNLRGDHYDPPTGYLFGLKPGQKYVKEGWENMWYYGFIGSLLVAGVA
YVFKPDTSIQTWALEEARRRLEAEGILEDPDKVQRK*
Coding >Ani_SJS100_1|g2938.t1
ATGTCTGCTCGTCCGTTGTCGCATTGCCTTCGCGCTCGCTGTGTCCCCCGCCGGGCCCAGAACATCCAGGGCTTC
TCGACCCGCAGCAACCTCCGCGGTGACCACTATGACCCTCCTACCGGCTACCTGTTTGGCCTCAAGCCCGGCCAG
AAGTATGTGAAGGAGGGTTGGGAGAACATGTGGTACTATGGATTCATCGGCAGTCTTCTCGTTGCCGGTGTCGCA
TACGTCTTCAAGCCAGACACTTCGATACAAACATGGGCTCTGGAAGAGGCTCGCCGGCGGCTGGAGGCCGAAGGC
ATTCTGGAGGACCCTGACAAGGTCCAGCGCAAGTAA
Transcript >Ani_SJS100_1|g2938.t1
ATGTCTGCTCGTCCGTTGTCGCATTGCCTTCGCGCTCGCTGTGTCCCCCGCCGGGCCCAGAACATCCAGGGCTTC
TCGACCCGCAGCAACCTCCGCGGTGACCACTATGACCCTCCTACCGGCTACCTGTTTGGCCTCAAGCCCGGCCAG
AAGTATGTGAAGGAGGGTTGGGAGAACATGTGGTACTATGGATTCATCGGCAGTCTTCTCGTTGCCGGTGTCGCA
TACGTCTTCAAGCCAGACACTTCGATACAAACATGGGCTCTGGAAGAGGCTCGCCGGCGGCTGGAGGCCGAAGGC
ATTCTGGAGGACCCTGACAAGGTCCAGCGCAAGTAA
Gene >Ani_SJS100_1|g2938.t1
ATGTCTGCTCGTCCGTTGTCGCATTGCCTTCGCGCTCGCTGTGTCCCCCGCCGGGCCCAGAACATCCAGGGCTTC
TCGACCCGCAGCAACCTCCGCGGTGACCACTATGACCCTCCTACCGGCTACCTGTTTGGCCTCAAGCCCGGCCAG
AAGTATGTGAAGGAGGGTTGGGAGAACATGTGGTACTATGGATTCATCGGCAGTCTTCTCGTTGCCGGTGTCGCA
TACGTCTTCAAGCCAGACACTTCGTATGTCAATTTCTCTCCCTCGTGTGACAGCTGAAGTAGATTGTTTTAAGAT
CTTTCGGCGCGTCACAACAAAACATTTCACCGCTTCAACGGAGTCGAAGATTAGATGCTGACGTGACCACAGGAT
ACAAACATGGGCTCTGGAAGAGGCTCGCCGGCGGCTGGAGGCCGAAGGCATTCTGGAGGACCCTGACAAGGTCCA
GCGCAAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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