Protein ID | Ani_SJS100_1|g2930.t1 |
Gene name | |
Location | scaffold_013:10812..13594 |
Strand | + |
Gene length (bp) | 2782 |
Transcript length (bp) | 2595 |
Coding sequence length (bp) | 2595 |
Protein length (aa) | 865 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF12738 | PTCB-BRCT | twin BRCT domain | 1.5E-06 | 113 | 177 |
PF12738 | PTCB-BRCT | twin BRCT domain | 3.4E-21 | 345 | 406 |
PF00533 | BRCT | BRCA1 C Terminus (BRCT) domain | 2.6E-08 | 107 | 182 |
PF00533 | BRCT | BRCA1 C Terminus (BRCT) domain | 7.2E-09 | 341 | 410 |
PF16770 | RTT107_BRCT_5 | Regulator of Ty1 transposition protein 107 BRCT domain | 4.1E-30 | 612 | 712 |
Orthofinder run ID | 3 |
Orthogroup | 3189 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g2930.t1 MAEQGGELQLFSQCKVCIICSKDLSADTAHQLASTFEEHGGETVIYEPPATFPPLSDFTHLISCTIDFPAFDAAG DALIPVVKPHWVHACLAKRKLANPRQYSPDPRLFLNDVVITCGDIPGGDKEAIIGGVLAKGGIYSPKVSQQVTHL VDLTAESDKARLIAAKKLNIKIVLPHWFDDCLKLGRRIDERPYTLPDPEILRAAPDAPIRSSENRDIIGASTTNP ANLPSSVKSPDAQPALTVFQDKNVMLSTDLGIGPRLLGSIEGIIKNGGGSITTDVSKADILICRYREGFAYRMAS RLNKDVGNLSWLYHLMTYNTWTSPLRRLLHYPVSRSGIPGFKGFKISLSNYVGEARAYLENLITATGAECTKTLK QENTHLVTAHGNSEKCAAAKEWGLQVVNHLWLEESYARWKLQPVSDPRYTHFPKRTNLGEVVGQTRLDRTVLESI FFQSEGLSREQVSPRRAMQTKEQNTVAAKSSDTMQPPSAKVTESESEVLPQPQIATPRAVERSRKTSTTDNQKLQ TPARARLTSEGKENDTPSTTSSRKSKEAATARLHEIAPDIALYEKEKKRVGGVIYGGRRKTDEDRVILNNGKKRR SMEAEDKSDEEDSTEAKRQKKGKPSVAMHLLITGYQKWVGNPKKEDSDKRQLRELGILVVQDARRCSHLAAPSIL RTPKFVNALAYGPAIVSIDFITQCLEKDELLDPADFPLKDDASEKKYGFSLEEAKMNAKKNKNKLLRGYQIHCVE TIRGGFDAFKSIVDANGGECSLFRGRVSYRSQREESEEESSGDDDRSRKEVYLLSSTSADHTKLWPRFRQMVLNR GKTPRIVRVDWLLDIAMSQTLRAADAYELDEEMAEKMEQ* |
Coding | >Ani_SJS100_1|g2930.t1 ATGGCTGAGCAGGGAGGAGAGCTTCAACTCTTCAGTCAGTGCAAAGTCTGTATCATATGCTCTAAAGATCTTAGT GCCGACACGGCACATCAGCTCGCATCTACATTCGAAGAACATGGCGGTGAAACTGTGATCTATGAGCCGCCAGCT ACCTTCCCTCCCCTCTCCGATTTCACCCACCTCATCTCCTGCACGATTGACTTTCCTGCCTTCGACGCGGCGGGG GACGCCCTGATACCAGTCGTCAAACCTCACTGGGTACATGCGTGCCTAGCAAAGAGAAAGCTAGCAAATCCGCGC CAATATAGTCCTGACCCGCGGCTCTTCTTGAACGATGTGGTGATCACATGCGGTGATATACCAGGAGGCGATAAG GAGGCTATCATCGGTGGCGTGCTGGCGAAAGGTGGGATCTACAGTCCGAAGGTCTCTCAGCAGGTCACGCATTTG GTTGATTTGACCGCGGAGTCCGATAAGGCTCGATTAATCGCCGCAAAGAAGTTGAATATCAAGATAGTGCTTCCA CACTGGTTTGACGACTGCCTAAAGCTTGGCCGAAGAATCGACGAGCGTCCATATACCCTTCCCGACCCCGAAATC CTCCGTGCAGCGCCAGATGCACCCATCCGTTCCTCAGAAAACCGTGACATCATCGGCGCATCCACAACGAACCCA GCCAACCTTCCCTCGTCTGTCAAATCGCCTGACGCGCAGCCGGCGCTTACCGTATTTCAAGACAAGAATGTCATG CTCTCCACAGACCTCGGTATTGGACCTCGTCTTCTCGGGTCCATCGAGGGTATCATCAAGAACGGCGGCGGCTCT ATCACGACGGATGTCTCAAAGGCTGATATCTTGATCTGTCGCTATAGAGAGGGTTTCGCATACCGTATGGCATCA AGGCTGAACAAGGACGTTGGAAATCTATCATGGCTTTACCACCTGATGACCTACAACACCTGGACATCTCCTCTA CGGCGATTGCTACACTATCCTGTCTCGCGGTCTGGAATCCCAGGGTTTAAGGGATTCAAGATCAGTCTGTCCAAC TATGTTGGAGAAGCAAGAGCATATTTGGAGAATCTGATCACCGCAACAGGCGCAGAATGCACAAAGACGCTAAAG CAAGAAAATACCCATCTTGTGACTGCTCATGGTAATAGTGAGAAATGCGCCGCGGCAAAGGAGTGGGGATTGCAG GTTGTCAATCACTTATGGTTGGAGGAGAGTTACGCAAGATGGAAGTTGCAACCCGTTTCTGATCCGCGCTATACT CACTTCCCTAAGAGAACGAACCTAGGCGAAGTTGTTGGCCAGACCAGGCTCGACAGAACGGTCCTTGAAAGCATA TTCTTCCAAAGTGAAGGCTTATCCCGAGAGCAGGTGAGTCCTCGACGGGCGATGCAAACCAAGGAACAGAATACC GTTGCTGCGAAGTCATCGGATACCATGCAACCACCATCAGCCAAAGTGACAGAATCCGAGAGCGAAGTACTGCCG CAGCCGCAAATCGCAACTCCGCGAGCGGTTGAAAGGTCGCGTAAGACAAGTACAACAGATAATCAGAAGTTACAA ACACCGGCGCGTGCTCGGCTTACGTCGGAAGGCAAGGAGAATGATACTCCATCTACGACAAGTAGCCGGAAGTCG AAAGAGGCCGCTACCGCCCGACTGCACGAGATCGCCCCGGACATTGCCCTGTACGAAAAAGAAAAGAAGCGTGTT GGTGGCGTGATCTATGGTGGTCGACGAAAGACCGACGAGGATCGAGTCATACTCAACAATGGCAAGAAGCGGCGG TCCATGGAAGCGGAGGACAAGAGCGATGAAGAGGACAGCACGGAAGCAAAGAGGCAGAAGAAGGGCAAGCCCTCT GTCGCAATGCACCTTCTCATTACGGGTTATCAAAAATGGGTTGGGAACCCGAAGAAAGAAGATTCGGATAAGCGT CAGCTCCGTGAGCTTGGCATCTTGGTTGTCCAAGACGCCCGAAGATGCTCTCATCTTGCTGCTCCCTCTATTTTG CGAACTCCTAAGTTTGTCAACGCGCTTGCATACGGTCCAGCTATTGTGAGCATTGACTTCATCACGCAATGCCTC GAAAAAGACGAACTTCTGGACCCTGCTGATTTCCCTCTAAAAGATGACGCTTCCGAGAAGAAATATGGGTTCTCA TTAGAAGAAGCAAAGATGAACGCCAAAAAGAACAAGAACAAGCTCCTGCGAGGGTATCAAATACACTGCGTCGAG ACCATTCGCGGTGGTTTTGACGCATTCAAGTCCATCGTGGATGCTAATGGAGGAGAATGCTCTCTTTTCCGTGGT CGCGTTTCATATCGATCACAGCGCGAGGAGAGCGAGGAAGAGAGCTCGGGAGACGACGATCGCAGCCGAAAGGAG GTATATCTTCTGAGCAGTACTTCTGCAGACCACACCAAGCTGTGGCCGCGGTTCCGCCAGATGGTCCTAAACAGA GGCAAAACACCACGGATAGTCCGGGTAGATTGGCTTCTTGATATCGCCATGTCCCAAACGCTGCGCGCAGCAGAT GCATATGAGCTAGACGAGGAGATGGCGGAAAAGATGGAGCAGTAG |
Transcript | >Ani_SJS100_1|g2930.t1 ATGGCTGAGCAGGGAGGAGAGCTTCAACTCTTCAGTCAGTGCAAAGTCTGTATCATATGCTCTAAAGATCTTAGT GCCGACACGGCACATCAGCTCGCATCTACATTCGAAGAACATGGCGGTGAAACTGTGATCTATGAGCCGCCAGCT ACCTTCCCTCCCCTCTCCGATTTCACCCACCTCATCTCCTGCACGATTGACTTTCCTGCCTTCGACGCGGCGGGG GACGCCCTGATACCAGTCGTCAAACCTCACTGGGTACATGCGTGCCTAGCAAAGAGAAAGCTAGCAAATCCGCGC CAATATAGTCCTGACCCGCGGCTCTTCTTGAACGATGTGGTGATCACATGCGGTGATATACCAGGAGGCGATAAG GAGGCTATCATCGGTGGCGTGCTGGCGAAAGGTGGGATCTACAGTCCGAAGGTCTCTCAGCAGGTCACGCATTTG GTTGATTTGACCGCGGAGTCCGATAAGGCTCGATTAATCGCCGCAAAGAAGTTGAATATCAAGATAGTGCTTCCA CACTGGTTTGACGACTGCCTAAAGCTTGGCCGAAGAATCGACGAGCGTCCATATACCCTTCCCGACCCCGAAATC CTCCGTGCAGCGCCAGATGCACCCATCCGTTCCTCAGAAAACCGTGACATCATCGGCGCATCCACAACGAACCCA GCCAACCTTCCCTCGTCTGTCAAATCGCCTGACGCGCAGCCGGCGCTTACCGTATTTCAAGACAAGAATGTCATG CTCTCCACAGACCTCGGTATTGGACCTCGTCTTCTCGGGTCCATCGAGGGTATCATCAAGAACGGCGGCGGCTCT ATCACGACGGATGTCTCAAAGGCTGATATCTTGATCTGTCGCTATAGAGAGGGTTTCGCATACCGTATGGCATCA AGGCTGAACAAGGACGTTGGAAATCTATCATGGCTTTACCACCTGATGACCTACAACACCTGGACATCTCCTCTA CGGCGATTGCTACACTATCCTGTCTCGCGGTCTGGAATCCCAGGGTTTAAGGGATTCAAGATCAGTCTGTCCAAC TATGTTGGAGAAGCAAGAGCATATTTGGAGAATCTGATCACCGCAACAGGCGCAGAATGCACAAAGACGCTAAAG CAAGAAAATACCCATCTTGTGACTGCTCATGGTAATAGTGAGAAATGCGCCGCGGCAAAGGAGTGGGGATTGCAG GTTGTCAATCACTTATGGTTGGAGGAGAGTTACGCAAGATGGAAGTTGCAACCCGTTTCTGATCCGCGCTATACT CACTTCCCTAAGAGAACGAACCTAGGCGAAGTTGTTGGCCAGACCAGGCTCGACAGAACGGTCCTTGAAAGCATA TTCTTCCAAAGTGAAGGCTTATCCCGAGAGCAGGTGAGTCCTCGACGGGCGATGCAAACCAAGGAACAGAATACC GTTGCTGCGAAGTCATCGGATACCATGCAACCACCATCAGCCAAAGTGACAGAATCCGAGAGCGAAGTACTGCCG CAGCCGCAAATCGCAACTCCGCGAGCGGTTGAAAGGTCGCGTAAGACAAGTACAACAGATAATCAGAAGTTACAA ACACCGGCGCGTGCTCGGCTTACGTCGGAAGGCAAGGAGAATGATACTCCATCTACGACAAGTAGCCGGAAGTCG AAAGAGGCCGCTACCGCCCGACTGCACGAGATCGCCCCGGACATTGCCCTGTACGAAAAAGAAAAGAAGCGTGTT GGTGGCGTGATCTATGGTGGTCGACGAAAGACCGACGAGGATCGAGTCATACTCAACAATGGCAAGAAGCGGCGG TCCATGGAAGCGGAGGACAAGAGCGATGAAGAGGACAGCACGGAAGCAAAGAGGCAGAAGAAGGGCAAGCCCTCT GTCGCAATGCACCTTCTCATTACGGGTTATCAAAAATGGGTTGGGAACCCGAAGAAAGAAGATTCGGATAAGCGT CAGCTCCGTGAGCTTGGCATCTTGGTTGTCCAAGACGCCCGAAGATGCTCTCATCTTGCTGCTCCCTCTATTTTG CGAACTCCTAAGTTTGTCAACGCGCTTGCATACGGTCCAGCTATTGTGAGCATTGACTTCATCACGCAATGCCTC GAAAAAGACGAACTTCTGGACCCTGCTGATTTCCCTCTAAAAGATGACGCTTCCGAGAAGAAATATGGGTTCTCA TTAGAAGAAGCAAAGATGAACGCCAAAAAGAACAAGAACAAGCTCCTGCGAGGGTATCAAATACACTGCGTCGAG ACCATTCGCGGTGGTTTTGACGCATTCAAGTCCATCGTGGATGCTAATGGAGGAGAATGCTCTCTTTTCCGTGGT CGCGTTTCATATCGATCACAGCGCGAGGAGAGCGAGGAAGAGAGCTCGGGAGACGACGATCGCAGCCGAAAGGAG GTATATCTTCTGAGCAGTACTTCTGCAGACCACACCAAGCTGTGGCCGCGGTTCCGCCAGATGGTCCTAAACAGA GGCAAAACACCACGGATAGTCCGGGTAGATTGGCTTCTTGATATCGCCATGTCCCAAACGCTGCGCGCAGCAGAT GCATATGAGCTAGACGAGGAGATGGCGGAAAAGATGGAGCAGTAG |
Gene | >Ani_SJS100_1|g2930.t1 ATGGCTGAGCAGGGAGGAGAGCTTCAACTCTTCAGTCAGTGCAAAGTCTGTATCATATGCTCTAAAGATCTTAGT GCCGACACGGCACATCAGGTATGACAGACCCAGCACATGCTATATTGGGTATTTTACGCAGGCTGAAGGGAAGAA CTATTGAATATAACAGCTCGCATCTACATTCGAAGAACATGGCGGTGAAACTGTGATCTATGAGCCGCCAGCTAC CTTCCCTCCCCTCTCCGATTTCACCCACCTCATCTCCTGCACGATTGACTTTCCTGCCTTCGACGCGGCGGGGGA CGCCCTGATACCAGTCGTCAAACCTCACTGGGTACATGCGTGCCTAGCAAAGAGAAAGCTAGCAAATCCGCGCCA ATATAGTCCTGACCCGCGGCTCTTCTTGAACGATGTGGTGATCACATGCGGTGATATACCAGGAGGCGATAAGGA GGCTATCATCGGTGGCGTGCTGGCGAAAGGTGGGATCTACAGTCCGAAGGTCTCTCAGCAGGTCACGCATTTGGT TGATTTGACCGCGGAGTCCGATAAGGCTCGATTAATCGCCGCAAAGAAGTTGAATATCAAGATAGTGCTTCCACA CTGGTAAGACGGTAGTGACCGAAGAGACTGGACCAATCTAACAATGTTTCCATACATAGGTTTGACGACTGCCTA AAGCTTGGCCGAAGAATCGACGAGCGTCCATATACCCTTCCCGACCCCGAAATCCTCCGTGCAGCGCCAGATGCA CCCATCCGTTCCTCAGAAAACCGTGACATCATCGGCGCATCCACAACGAACCCAGCCAACCTTCCCTCGTCTGTC AAATCGCCTGACGCGCAGCCGGCGCTTACCGTATTTCAAGACAAGAATGTCATGCTCTCCACAGACCTCGGTATT GGACCTCGTCTTCTCGGGTCCATCGAGGGTATCATCAAGAACGGCGGCGGCTCTATCACGACGGATGTCTCAAAG GCTGATATCTTGATCTGTCGCTATAGAGAGGGTTTCGCATACCGTATGGCATCAAGGCTGAACAAGGACGTTGGA AATCTATCATGGCTTTACCACCTGATGACCTACAACACCTGGACATCTCCTCTACGGCGATTGCTACACTATCCT GTCTCGCGGTCTGGAATCCCAGGGTTTAAGGGATTCAAGATCAGTCTGTCCAACTATGTTGGAGAAGCAAGAGCA TATTTGGAGAATCTGATCACCGCAACAGGCGCAGAATGCACAAAGACGCTAAAGCAAGAAAATACCCATCTTGTG ACTGCTCATGGTAATAGTGAGAAATGCGCCGCGGCAAAGGAGTGGGGATTGCAGGTTGTCAATCACTTATGGTTG GAGGAGAGTTACGCAAGATGGAAGTTGCAACCCGTTTCTGATCCGCGCTATACTCACTTCCCTAAGAGAACGAAC CTAGGCGAAGTTGTTGGCCAGACCAGGCTCGACAGAACGGTCCTTGAAAGCATATTCTTCCAAAGTGAAGGCTTA TCCCGAGAGCAGGTGAGTCCTCGACGGGCGATGCAAACCAAGGAACAGAATACCGTTGCTGCGAAGTCATCGGAT ACCATGCAACCACCATCAGCCAAAGTGACAGAATCCGAGAGCGAAGTACTGCCGCAGCCGCAAATCGCAACTCCG CGAGCGGTTGAAAGGTCGCGTAAGACAAGTACAACAGATAATCAGAAGTTACAAACACCGGCGCGTGCTCGGCTT ACGTCGGAAGGCAAGGAGAATGATACTCCATCTACGACAAGTAGCCGGAAGTCGAAAGAGGCCGCTACCGCCCGA CTGCACGAGATCGCCCCGGACATTGCCCTGTACGAAAAAGAAAAGAAGCGTGTTGGTGGCGTGATCTATGGTGGT CGACGAAAGACCGACGAGGATCGAGTCATACTCAACAATGGCAAGAAGCGGCGGTCCATGGAAGCGGAGGACAAG AGCGATGAAGAGGACAGCACGGAAGCAAAGAGGCAGAAGAAGGGCAAGCCCTCTGTCGCAATGCACCTTCTCATT ACGGGTTATCAAAAATGGGTTGGGAACCCGAAGAAAGAAGATTCGGATAAGGTTTGTTCACCTCTTTGTACATGT CTATGATTGAGAGTGCCCCTCTGACTGTGAGCAGCGTCAGCTCCGTGAGCTTGGCATCTTGGTTGTCCAAGACGC CCGAAGATGCTCTCATCTTGCTGCTCCCTCTATTTTGCGAACTCCTAAGTTTGTCAACGCGCTTGCATACGGTCC AGCTATTGTGAGCATTGACTTCATCACGCAATGCCTCGAAAAAGACGAACTTCTGGACCCTGCTGATTTCCCTCT AAAAGATGACGCTTCCGAGAAGAAATATGGGTTCTCATTAGAAGAAGCAAAGATGAACGCCAAAAAGAACAAGAA CAAGCTCCTGCGAGGGTATCAAATACACTGCGTCGAGACCATTCGCGGTGGTTTTGACGCATTCAAGTCCATCGT GGATGCTAATGGAGGAGAATGCTCTCTTTTCCGTGGTCGCGTTTCATATCGATCACAGCGCGAGGAGAGCGAGGA AGAGAGCTCGGGAGACGACGATCGCAGCCGAAAGGAGGTATATCTTCTGAGCAGTACTTCTGCAGACCACACCAA GCTGTGGCCGCGGTTCCGCCAGATGGTCCTAAACAGAGGCAAAACACCACGGATAGTCCGGGTAGATTGGCTTCT TGATATCGCCATGTCCCAAACGCTGCGCGCAGCAGATGCATATGAGCTAGACGAGGAGATGGCGGAAAAGATGGA GCAGTAG |