Protein ID | Ani_SJS100_1|g2903.t1 |
Gene name | |
Location | scaffold_012:468266..469191 |
Strand | - |
Gene length (bp) | 925 |
Transcript length (bp) | 699 |
Coding sequence length (bp) | 699 |
Protein length (aa) | 233 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF05241 | EBP | EXPERA (EXPanded EBP superfamily) | 2.3E-23 | 97 | 211 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 68 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 30 | 52 | 22 |
2 | 65 | 87 | 22 |
3 | 118 | 140 | 22 |
4 | 153 | 172 | 19 |
5 | 187 | 209 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g2903.t1 MTIMDSKAPLHPYYPLNAQIYDYAPNEASLFSILTTASVGAAALLGIIFTLSGRLRPALTKADRLAILWFALSGT IHCFFEGYFMINHARMASAQDFFGQLWKEYALSDSRYMTSDTLVLCMETITVLLWGPLCFLVAYLTLSQHPLRHP LQIIVCMSHLYGDALYYATSLFDHYVHDRPYCRPEPYYFWVYYFLMNFIWIVVPFYYLYQSIRTTTEALRVLENP SRQRKDR* |
Coding | >Ani_SJS100_1|g2903.t1 ATGACTATTATGGACTCCAAAGCTCCACTCCATCCCTACTACCCCCTCAATGCTCAAATCTACGATTATGCTCCC AATGAGGCTTCCTTGTTCAGTATCCTCACTACTGCTAGCGTTGGCGCGGCAGCTTTGCTGGGAATCATTTTCACC CTGAGCGGTAGACTCCGACCAGCGCTAACAAAAGCCGACCGTCTTGCTATTCTGTGGTTTGCCCTCTCGGGTACG ATTCACTGCTTCTTCGAGGGTTATTTTATGATCAACCATGCTCGTATGGCATCTGCGCAAGACTTCTTCGGTCAA CTATGGAAGGAATATGCCCTGTCGGATTCGCGATACATGACCTCAGATACCCTCGTCTTGTGTATGGAGACTATC ACGGTCCTTCTTTGGGGCCCGCTCTGTTTTCTGGTTGCATACTTGACCCTTTCTCAGCATCCTCTGCGCCATCCG CTGCAGATCATCGTGTGCATGAGCCACCTCTATGGCGATGCTCTTTACTATGCGACCAGCTTGTTCGATCACTAC GTTCATGACCGACCGTACTGCCGCCCGGAGCCTTACTACTTTTGGGTGTACTATTTCCTGATGAATTTCATCTGG ATTGTGGTTCCGTTCTACTATCTTTACCAGAGTATCCGGACAACAACGGAGGCCCTCAGAGTCTTGGAAAATCCT TCCAGACAGCGCAAGGACCGATAA |
Transcript | >Ani_SJS100_1|g2903.t1 ATGACTATTATGGACTCCAAAGCTCCACTCCATCCCTACTACCCCCTCAATGCTCAAATCTACGATTATGCTCCC AATGAGGCTTCCTTGTTCAGTATCCTCACTACTGCTAGCGTTGGCGCGGCAGCTTTGCTGGGAATCATTTTCACC CTGAGCGGTAGACTCCGACCAGCGCTAACAAAAGCCGACCGTCTTGCTATTCTGTGGTTTGCCCTCTCGGGTACG ATTCACTGCTTCTTCGAGGGTTATTTTATGATCAACCATGCTCGTATGGCATCTGCGCAAGACTTCTTCGGTCAA CTATGGAAGGAATATGCCCTGTCGGATTCGCGATACATGACCTCAGATACCCTCGTCTTGTGTATGGAGACTATC ACGGTCCTTCTTTGGGGCCCGCTCTGTTTTCTGGTTGCATACTTGACCCTTTCTCAGCATCCTCTGCGCCATCCG CTGCAGATCATCGTGTGCATGAGCCACCTCTATGGCGATGCTCTTTACTATGCGACCAGCTTGTTCGATCACTAC GTTCATGACCGACCGTACTGCCGCCCGGAGCCTTACTACTTTTGGGTGTACTATTTCCTGATGAATTTCATCTGG ATTGTGGTTCCGTTCTACTATCTTTACCAGAGTATCCGGACAACAACGGAGGCCCTCAGAGTCTTGGAAAATCCT TCCAGACAGCGCAAGGACCGATAA |
Gene | >Ani_SJS100_1|g2903.t1 ATGACTATTATGGACTCCAAAGCTCCACTCCATCCCTACTACCCCCTCAATGCTCAAATCTACGATTATGCTCCC AATGAGGCTTCCTTGTTCAGTATCCTCACTACTGCTAGCGTTGGCGCGGCAGCTTTGCTGGGAATCATTTTCACC CTGAGCGGTAGACTCCGACCAGCGCTAACAAAAGCCGACCGTCTTGCTATTCTGTGGTTTGCCCTCTGTAAGTTG GACTCTATAGTTACGTACTATTGCGACAGCGAGACAACAATTCTCGATGCTAATTGCGGTGTGAACTCCAAGCGG GTACGATTCACTGCTTCTTCGAGGGTTATTTTATGATCAACCATGCTCGTATGGCATCTGCGCAAGACTTCTTCG GTCAACTATGGAAGGAATATGCCCTGTCGGATTCGCGATACATGACCTCAGATACCCTCGTCTTGTGTATGGAGA CTATCACGGTCGTAGGTGCACCCGTGGCTGCAGGGACCCCTGCTCATTGTCTTCCTTAGCTCCGCCTGCGACACT GTTGCTAAACTACTGGAATAGCTTCTTTGGGGCCCGCTCTGTTTTCTGGTTGCATACTTGACCCTTTCTCAGCAT CCTCTGCGCCATCCGCTGCAGATCATCGTGTGCATGAGCCACCTCTATGGCGATGCTCTTTACTATGCGACCAGC TTGTTCGATCACTACGTTCATGACCGACCGTACTGCCGCCCGGAGCCTTACTACTTTTGGGTGTACTATTTCCTG ATGAATTTCATCTGGATTGTGGTTCCGTTCTGTACGTTCCCCACGGATCCCTTGCTTGATTTCCACTCGTCTTGG GCTAATGATGGACATAGACTATCTTTACCAGAGTATCCGGACAACAACGGAGGCCCTCAGAGTCTTGGAAAATCC TTCCAGACAGCGCAAGGACCGATAA |