Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g2903.t1
Gene name
Location	scaffold_012:468266..469191
Strand	-
Gene length (bp)	925
Transcript length (bp)	699
Coding sequence length (bp)	699
Protein length (aa)	233

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF05241	EBP	EXPERA (EXPanded EBP superfamily)	2.3E-23	97	211

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 68	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	30	52	22
2	65	87	22
3	118	140	22
4	153	172	19
5	187	209	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g2903.t1 MTIMDSKAPLHPYYPLNAQIYDYAPNEASLFSILTTASVGAAALLGIIFTLSGRLRPALTKADRLAILWFALSGT IHCFFEGYFMINHARMASAQDFFGQLWKEYALSDSRYMTSDTLVLCMETITVLLWGPLCFLVAYLTLSQHPLRHP LQIIVCMSHLYGDALYYATSLFDHYVHDRPYCRPEPYYFWVYYFLMNFIWIVVPFYYLYQSIRTTTEALRVLENP SRQRKDR*
Coding	>Ani_SJS100_1\|g2903.t1 ATGACTATTATGGACTCCAAAGCTCCACTCCATCCCTACTACCCCCTCAATGCTCAAATCTACGATTATGCTCCC AATGAGGCTTCCTTGTTCAGTATCCTCACTACTGCTAGCGTTGGCGCGGCAGCTTTGCTGGGAATCATTTTCACC CTGAGCGGTAGACTCCGACCAGCGCTAACAAAAGCCGACCGTCTTGCTATTCTGTGGTTTGCCCTCTCGGGTACG ATTCACTGCTTCTTCGAGGGTTATTTTATGATCAACCATGCTCGTATGGCATCTGCGCAAGACTTCTTCGGTCAA CTATGGAAGGAATATGCCCTGTCGGATTCGCGATACATGACCTCAGATACCCTCGTCTTGTGTATGGAGACTATC ACGGTCCTTCTTTGGGGCCCGCTCTGTTTTCTGGTTGCATACTTGACCCTTTCTCAGCATCCTCTGCGCCATCCG CTGCAGATCATCGTGTGCATGAGCCACCTCTATGGCGATGCTCTTTACTATGCGACCAGCTTGTTCGATCACTAC GTTCATGACCGACCGTACTGCCGCCCGGAGCCTTACTACTTTTGGGTGTACTATTTCCTGATGAATTTCATCTGG ATTGTGGTTCCGTTCTACTATCTTTACCAGAGTATCCGGACAACAACGGAGGCCCTCAGAGTCTTGGAAAATCCT TCCAGACAGCGCAAGGACCGATAA
Transcript	>Ani_SJS100_1\|g2903.t1 ATGACTATTATGGACTCCAAAGCTCCACTCCATCCCTACTACCCCCTCAATGCTCAAATCTACGATTATGCTCCC AATGAGGCTTCCTTGTTCAGTATCCTCACTACTGCTAGCGTTGGCGCGGCAGCTTTGCTGGGAATCATTTTCACC CTGAGCGGTAGACTCCGACCAGCGCTAACAAAAGCCGACCGTCTTGCTATTCTGTGGTTTGCCCTCTCGGGTACG ATTCACTGCTTCTTCGAGGGTTATTTTATGATCAACCATGCTCGTATGGCATCTGCGCAAGACTTCTTCGGTCAA CTATGGAAGGAATATGCCCTGTCGGATTCGCGATACATGACCTCAGATACCCTCGTCTTGTGTATGGAGACTATC ACGGTCCTTCTTTGGGGCCCGCTCTGTTTTCTGGTTGCATACTTGACCCTTTCTCAGCATCCTCTGCGCCATCCG CTGCAGATCATCGTGTGCATGAGCCACCTCTATGGCGATGCTCTTTACTATGCGACCAGCTTGTTCGATCACTAC GTTCATGACCGACCGTACTGCCGCCCGGAGCCTTACTACTTTTGGGTGTACTATTTCCTGATGAATTTCATCTGG ATTGTGGTTCCGTTCTACTATCTTTACCAGAGTATCCGGACAACAACGGAGGCCCTCAGAGTCTTGGAAAATCCT TCCAGACAGCGCAAGGACCGATAA
Gene	>Ani_SJS100_1\|g2903.t1 ATGACTATTATGGACTCCAAAGCTCCACTCCATCCCTACTACCCCCTCAATGCTCAAATCTACGATTATGCTCCC AATGAGGCTTCCTTGTTCAGTATCCTCACTACTGCTAGCGTTGGCGCGGCAGCTTTGCTGGGAATCATTTTCACC CTGAGCGGTAGACTCCGACCAGCGCTAACAAAAGCCGACCGTCTTGCTATTCTGTGGTTTGCCCTCTGTAAGTTG GACTCTATAGTTACGTACTATTGCGACAGCGAGACAACAATTCTCGATGCTAATTGCGGTGTGAACTCCAAGCGG GTACGATTCACTGCTTCTTCGAGGGTTATTTTATGATCAACCATGCTCGTATGGCATCTGCGCAAGACTTCTTCG GTCAACTATGGAAGGAATATGCCCTGTCGGATTCGCGATACATGACCTCAGATACCCTCGTCTTGTGTATGGAGA CTATCACGGTCGTAGGTGCACCCGTGGCTGCAGGGACCCCTGCTCATTGTCTTCCTTAGCTCCGCCTGCGACACT GTTGCTAAACTACTGGAATAGCTTCTTTGGGGCCCGCTCTGTTTTCTGGTTGCATACTTGACCCTTTCTCAGCAT CCTCTGCGCCATCCGCTGCAGATCATCGTGTGCATGAGCCACCTCTATGGCGATGCTCTTTACTATGCGACCAGC TTGTTCGATCACTACGTTCATGACCGACCGTACTGCCGCCCGGAGCCTTACTACTTTTGGGTGTACTATTTCCTG ATGAATTTCATCTGGATTGTGGTTCCGTTCTGTACGTTCCCCACGGATCCCTTGCTTGATTTCCACTCGTCTTGG GCTAATGATGGACATAGACTATCTTTACCAGAGTATCCGGACAACAACGGAGGCCCTCAGAGTCTTGGAAAATCC TTCCAGACAGCGCAAGGACCGATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail