Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g2903.t1
Gene name
Locationscaffold_012:468266..469191
Strand-
Gene length (bp)925
Transcript length (bp)699
Coding sequence length (bp)699
Protein length (aa) 233

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05241 EBP EXPERA (EXPanded EBP superfamily) 2.3E-23 97 211

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 68 0.5

Transmembrane Domains

Domain # Start End Length
1 30 52 22
2 65 87 22
3 118 140 22
4 153 172 19
5 187 209 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g2903.t1
MTIMDSKAPLHPYYPLNAQIYDYAPNEASLFSILTTASVGAAALLGIIFTLSGRLRPALTKADRLAILWFALSGT
IHCFFEGYFMINHARMASAQDFFGQLWKEYALSDSRYMTSDTLVLCMETITVLLWGPLCFLVAYLTLSQHPLRHP
LQIIVCMSHLYGDALYYATSLFDHYVHDRPYCRPEPYYFWVYYFLMNFIWIVVPFYYLYQSIRTTTEALRVLENP
SRQRKDR*
Coding >Ani_SJS100_1|g2903.t1
ATGACTATTATGGACTCCAAAGCTCCACTCCATCCCTACTACCCCCTCAATGCTCAAATCTACGATTATGCTCCC
AATGAGGCTTCCTTGTTCAGTATCCTCACTACTGCTAGCGTTGGCGCGGCAGCTTTGCTGGGAATCATTTTCACC
CTGAGCGGTAGACTCCGACCAGCGCTAACAAAAGCCGACCGTCTTGCTATTCTGTGGTTTGCCCTCTCGGGTACG
ATTCACTGCTTCTTCGAGGGTTATTTTATGATCAACCATGCTCGTATGGCATCTGCGCAAGACTTCTTCGGTCAA
CTATGGAAGGAATATGCCCTGTCGGATTCGCGATACATGACCTCAGATACCCTCGTCTTGTGTATGGAGACTATC
ACGGTCCTTCTTTGGGGCCCGCTCTGTTTTCTGGTTGCATACTTGACCCTTTCTCAGCATCCTCTGCGCCATCCG
CTGCAGATCATCGTGTGCATGAGCCACCTCTATGGCGATGCTCTTTACTATGCGACCAGCTTGTTCGATCACTAC
GTTCATGACCGACCGTACTGCCGCCCGGAGCCTTACTACTTTTGGGTGTACTATTTCCTGATGAATTTCATCTGG
ATTGTGGTTCCGTTCTACTATCTTTACCAGAGTATCCGGACAACAACGGAGGCCCTCAGAGTCTTGGAAAATCCT
TCCAGACAGCGCAAGGACCGATAA
Transcript >Ani_SJS100_1|g2903.t1
ATGACTATTATGGACTCCAAAGCTCCACTCCATCCCTACTACCCCCTCAATGCTCAAATCTACGATTATGCTCCC
AATGAGGCTTCCTTGTTCAGTATCCTCACTACTGCTAGCGTTGGCGCGGCAGCTTTGCTGGGAATCATTTTCACC
CTGAGCGGTAGACTCCGACCAGCGCTAACAAAAGCCGACCGTCTTGCTATTCTGTGGTTTGCCCTCTCGGGTACG
ATTCACTGCTTCTTCGAGGGTTATTTTATGATCAACCATGCTCGTATGGCATCTGCGCAAGACTTCTTCGGTCAA
CTATGGAAGGAATATGCCCTGTCGGATTCGCGATACATGACCTCAGATACCCTCGTCTTGTGTATGGAGACTATC
ACGGTCCTTCTTTGGGGCCCGCTCTGTTTTCTGGTTGCATACTTGACCCTTTCTCAGCATCCTCTGCGCCATCCG
CTGCAGATCATCGTGTGCATGAGCCACCTCTATGGCGATGCTCTTTACTATGCGACCAGCTTGTTCGATCACTAC
GTTCATGACCGACCGTACTGCCGCCCGGAGCCTTACTACTTTTGGGTGTACTATTTCCTGATGAATTTCATCTGG
ATTGTGGTTCCGTTCTACTATCTTTACCAGAGTATCCGGACAACAACGGAGGCCCTCAGAGTCTTGGAAAATCCT
TCCAGACAGCGCAAGGACCGATAA
Gene >Ani_SJS100_1|g2903.t1
ATGACTATTATGGACTCCAAAGCTCCACTCCATCCCTACTACCCCCTCAATGCTCAAATCTACGATTATGCTCCC
AATGAGGCTTCCTTGTTCAGTATCCTCACTACTGCTAGCGTTGGCGCGGCAGCTTTGCTGGGAATCATTTTCACC
CTGAGCGGTAGACTCCGACCAGCGCTAACAAAAGCCGACCGTCTTGCTATTCTGTGGTTTGCCCTCTGTAAGTTG
GACTCTATAGTTACGTACTATTGCGACAGCGAGACAACAATTCTCGATGCTAATTGCGGTGTGAACTCCAAGCGG
GTACGATTCACTGCTTCTTCGAGGGTTATTTTATGATCAACCATGCTCGTATGGCATCTGCGCAAGACTTCTTCG
GTCAACTATGGAAGGAATATGCCCTGTCGGATTCGCGATACATGACCTCAGATACCCTCGTCTTGTGTATGGAGA
CTATCACGGTCGTAGGTGCACCCGTGGCTGCAGGGACCCCTGCTCATTGTCTTCCTTAGCTCCGCCTGCGACACT
GTTGCTAAACTACTGGAATAGCTTCTTTGGGGCCCGCTCTGTTTTCTGGTTGCATACTTGACCCTTTCTCAGCAT
CCTCTGCGCCATCCGCTGCAGATCATCGTGTGCATGAGCCACCTCTATGGCGATGCTCTTTACTATGCGACCAGC
TTGTTCGATCACTACGTTCATGACCGACCGTACTGCCGCCCGGAGCCTTACTACTTTTGGGTGTACTATTTCCTG
ATGAATTTCATCTGGATTGTGGTTCCGTTCTGTACGTTCCCCACGGATCCCTTGCTTGATTTCCACTCGTCTTGG
GCTAATGATGGACATAGACTATCTTTACCAGAGTATCCGGACAACAACGGAGGCCCTCAGAGTCTTGGAAAATCC
TTCCAGACAGCGCAAGGACCGATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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