Protein ID | Ani_SJS100_1|g2887.t1 |
Gene name | |
Location | scaffold_012:402718..406024 |
Strand | + |
Gene length (bp) | 3306 |
Transcript length (bp) | 2223 |
Coding sequence length (bp) | 2223 |
Protein length (aa) | 741 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13622 | 4HBT_3 | Thioesterase-like superfamily | 3.0E-79 | 415 | 728 |
PF02551 | Acyl_CoA_thio | Acyl-CoA thioesterase | 1.2E-11 | 664 | 727 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 60 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 28 | 50 | 22 |
2 | 65 | 87 | 22 |
3 | 92 | 114 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g2887.t1 MPAGSCQVYGSVSGEDINSYPKYTGSPLLLFLADLWLFLRNIFYLPCIFLPLTPWSCGSLDELYPSLANIFDICL HCVLFVLQLVFLASLPLFIWLPFGVYVLYILTALALNTLICYALNRGIPADGLRSTEDDFSRRWNRHEDEYWIFL NGICVGRNWLQNNVDRISRTFHRPVVGVHNKTAGVIFDIIQCLIQRSLLYATNDVRDCYVLVRRALYRSEIKKVV LILHSQGGIEGGMILDWLLDEVPQDLIRQLEIYTFGCLANHFNNPYRDIASCNAAMRYVRTGEITGNVRNRTILH IEHYANQRDFACRFGVLNFDHSKPRDRRENRFMGKVLVSPASGHQFNQHYLDTMFPLDPTNRFTREPREGDFMDT DVIVTTLFKPPPLDSTKAPIENVLELTPVIDVGKDVFTNTRPLWHPPGARGIYGGAAIAQCLAAALRTVPADFAV HSMHCYFLLAGDSEIPILYHVERVRDGRSYITRTVQAKQRGRPIFTTTLSFNKANSGGKKKLEHASSMPAVTLPE EPGPGSKRKFEESGGGPFESQRAGVVDRNLPPQERKTRRFMRSRGKISDAGGHQAHLSALAYMTDSYFIGTVSRV HNIPRFSSPEELKKALNALKNPSDLDDEDIARALKELKEEEAADLRRRLEGALHRVTTQPPQEHKEVGMMVSLDH SIHFHNPWAFRADEWMLTEMESPWAGEGRGLVLQKIWSKDGTLIATCTQEGVVRLKQDEPPRSKL* |
Coding | >Ani_SJS100_1|g2887.t1 ATGCCTGCTGGATCTTGTCAAGTCTATGGCTCCGTATCTGGTGAGGACATCAACAGTTACCCCAAATATACGGGT TCGCCATTGCTGCTGTTCCTCGCTGATCTGTGGCTCTTCCTCCGTAATATCTTCTACCTACCGTGCATTTTCTTG CCTCTCACGCCATGGTCATGTGGAAGTCTGGATGAGCTGTATCCTTCCCTAGCCAATATCTTCGATATCTGTCTT CATTGTGTTTTGTTTGTCCTCCAGCTCGTCTTCCTTGCCTCACTCCCATTATTCATTTGGCTTCCATTCGGTGTC TATGTTCTGTATATTTTGACCGCTCTGGCCCTGAATACGCTCATCTGCTACGCTTTGAACCGGGGAATCCCAGCC GACGGTCTCAGGTCAACGGAAGATGATTTCTCAAGGCGGTGGAATCGCCATGAGGACGAGTATTGGATATTCCTC AATGGAATTTGCGTCGGGAGGAACTGGCTGCAGAATAACGTCGATCGCATATCGCGGACATTCCACCGTCCAGTT GTTGGTGTCCACAATAAAACGGCCGGTGTCATATTCGACATTATCCAATGCCTCATTCAACGTTCCTTGTTGTAC GCGACAAATGACGTCCGAGACTGCTACGTGTTGGTTAGAAGAGCCTTGTATCGGTCGGAGATCAAAAAGGTTGTT TTAATCCTACACTCGCAAGGGGGCATCGAGGGTGGAATGATCCTGGATTGGCTTCTCGACGAAGTACCGCAGGAT CTTATCCGGCAACTGGAGATTTACACCTTTGGTTGTCTTGCAAATCACTTCAACAACCCGTATCGCGACATAGCA TCGTGTAACGCAGCCATGCGCTATGTGCGCACGGGAGAAATCACTGGCAATGTTCGCAACCGCACAATTCTACAC ATCGAGCACTATGCCAACCAACGTGATTTTGCATGTCGCTTTGGGGTGCTTAATTTTGACCACAGTAAGCCACGG GACCGTCGCGAAAACCGGTTCATGGGTAAGGTGCTTGTAAGTCCGGCTTCAGGCCACCAATTCAATCAGCATTAC CTTGATACGATGTTCCCACTGGATCCAACCAATCGATTTACGCGGGAGCCGCGGGAGGGTGACTTCATGGACACG GATGTCATAGTAACGACTCTTTTCAAACCTCCGCCGTTGGATTCCACCAAGGCGCCCATTGAGAATGTGTTAGAA CTGACACCGGTGATTGACGTGGGGAAAGATGTTTTTACCAATACGCGACCCCTTTGGCATCCGCCTGGAGCGCGA GGCATTTACGGTGGTGCTGCCATCGCCCAGTGTCTCGCCGCTGCGCTACGAACCGTTCCCGCCGATTTCGCCGTC CATAGCATGCACTGTTACTTCCTCCTCGCCGGTGACTCCGAGATACCTATATTGTACCACGTGGAACGAGTACGT GATGGAAGGAGCTATATCACGCGGACGGTACAAGCCAAGCAGCGCGGTCGCCCCATCTTCACCACAACACTGAGT TTCAACAAGGCCAACAGTGGCGGCAAGAAGAAGCTTGAGCATGCATCTTCGATGCCAGCTGTCACTCTGCCAGAG GAGCCTGGACCGGGATCTAAAAGAAAATTCGAGGAATCGGGTGGTGGGCCATTCGAGTCACAGAGAGCGGGTGTT GTAGATCGAAACCTCCCTCCTCAGGAACGGAAAACGAGACGCTTCATGCGATCACGGGGCAAGATTTCCGATGCG GGTGGCCATCAGGCTCATCTGTCTGCCCTTGCATATATGACCGACAGCTATTTCATTGGCACCGTGTCCAGGGTC CATAATATTCCTCGGTTCTCCTCCCCAGAGGAACTTAAGAAGGCACTAAATGCGCTCAAGAACCCGTCTGACCTG GATGACGAGGATATCGCGCGTGCTCTTAAGGAGCTGAAGGAAGAGGAAGCGGCAGATCTACGCCGTCGCTTGGAA GGCGCTTTGCATAGAGTAACTACTCAGCCACCTCAGGAACATAAGGAAGTGGGCATGATGGTCAGTCTTGATCAC TCAATCCACTTCCATAACCCTTGGGCATTTCGGGCAGACGAATGGATGCTTACAGAAATGGAGAGCCCTTGGGCT GGCGAGGGACGAGGCTTGGTGTTACAGAAGATCTGGTCAAAGGATGGTACTTTGATCGCTACATGCACCCAAGAG GGAGTCGTGCGTCTCAAACAAGACGAGCCACCTCGGTCTAAGCTTTGA |
Transcript | >Ani_SJS100_1|g2887.t1 ATGCCTGCTGGATCTTGTCAAGTCTATGGCTCCGTATCTGGTGAGGACATCAACAGTTACCCCAAATATACGGGT TCGCCATTGCTGCTGTTCCTCGCTGATCTGTGGCTCTTCCTCCGTAATATCTTCTACCTACCGTGCATTTTCTTG CCTCTCACGCCATGGTCATGTGGAAGTCTGGATGAGCTGTATCCTTCCCTAGCCAATATCTTCGATATCTGTCTT CATTGTGTTTTGTTTGTCCTCCAGCTCGTCTTCCTTGCCTCACTCCCATTATTCATTTGGCTTCCATTCGGTGTC TATGTTCTGTATATTTTGACCGCTCTGGCCCTGAATACGCTCATCTGCTACGCTTTGAACCGGGGAATCCCAGCC GACGGTCTCAGGTCAACGGAAGATGATTTCTCAAGGCGGTGGAATCGCCATGAGGACGAGTATTGGATATTCCTC AATGGAATTTGCGTCGGGAGGAACTGGCTGCAGAATAACGTCGATCGCATATCGCGGACATTCCACCGTCCAGTT GTTGGTGTCCACAATAAAACGGCCGGTGTCATATTCGACATTATCCAATGCCTCATTCAACGTTCCTTGTTGTAC GCGACAAATGACGTCCGAGACTGCTACGTGTTGGTTAGAAGAGCCTTGTATCGGTCGGAGATCAAAAAGGTTGTT TTAATCCTACACTCGCAAGGGGGCATCGAGGGTGGAATGATCCTGGATTGGCTTCTCGACGAAGTACCGCAGGAT CTTATCCGGCAACTGGAGATTTACACCTTTGGTTGTCTTGCAAATCACTTCAACAACCCGTATCGCGACATAGCA TCGTGTAACGCAGCCATGCGCTATGTGCGCACGGGAGAAATCACTGGCAATGTTCGCAACCGCACAATTCTACAC ATCGAGCACTATGCCAACCAACGTGATTTTGCATGTCGCTTTGGGGTGCTTAATTTTGACCACAGTAAGCCACGG GACCGTCGCGAAAACCGGTTCATGGGTAAGGTGCTTGTAAGTCCGGCTTCAGGCCACCAATTCAATCAGCATTAC CTTGATACGATGTTCCCACTGGATCCAACCAATCGATTTACGCGGGAGCCGCGGGAGGGTGACTTCATGGACACG GATGTCATAGTAACGACTCTTTTCAAACCTCCGCCGTTGGATTCCACCAAGGCGCCCATTGAGAATGTGTTAGAA CTGACACCGGTGATTGACGTGGGGAAAGATGTTTTTACCAATACGCGACCCCTTTGGCATCCGCCTGGAGCGCGA GGCATTTACGGTGGTGCTGCCATCGCCCAGTGTCTCGCCGCTGCGCTACGAACCGTTCCCGCCGATTTCGCCGTC CATAGCATGCACTGTTACTTCCTCCTCGCCGGTGACTCCGAGATACCTATATTGTACCACGTGGAACGAGTACGT GATGGAAGGAGCTATATCACGCGGACGGTACAAGCCAAGCAGCGCGGTCGCCCCATCTTCACCACAACACTGAGT TTCAACAAGGCCAACAGTGGCGGCAAGAAGAAGCTTGAGCATGCATCTTCGATGCCAGCTGTCACTCTGCCAGAG GAGCCTGGACCGGGATCTAAAAGAAAATTCGAGGAATCGGGTGGTGGGCCATTCGAGTCACAGAGAGCGGGTGTT GTAGATCGAAACCTCCCTCCTCAGGAACGGAAAACGAGACGCTTCATGCGATCACGGGGCAAGATTTCCGATGCG GGTGGCCATCAGGCTCATCTGTCTGCCCTTGCATATATGACCGACAGCTATTTCATTGGCACCGTGTCCAGGGTC CATAATATTCCTCGGTTCTCCTCCCCAGAGGAACTTAAGAAGGCACTAAATGCGCTCAAGAACCCGTCTGACCTG GATGACGAGGATATCGCGCGTGCTCTTAAGGAGCTGAAGGAAGAGGAAGCGGCAGATCTACGCCGTCGCTTGGAA GGCGCTTTGCATAGAGTAACTACTCAGCCACCTCAGGAACATAAGGAAGTGGGCATGATGGTCAGTCTTGATCAC TCAATCCACTTCCATAACCCTTGGGCATTTCGGGCAGACGAATGGATGCTTACAGAAATGGAGAGCCCTTGGGCT GGCGAGGGACGAGGCTTGGTGTTACAGAAGATCTGGTCAAAGGATGGTACTTTGATCGCTACATGCACCCAAGAG GGAGTCGTGCGTCTCAAACAAGACGAGCCACCTCGGTCTAAGCTTTGA |
Gene | >Ani_SJS100_1|g2887.t1 ATGCCTGCTGGATCTTGTCAAGTCTATGGCTCCGTATCTGGTGAGGACATCAACAGTTACCCCAAATATACGGGT TCGCCATTGCTGCTGTTCCTCGCTGATCTGTGGCTCTTCCTCCGTAATATCTTCTACCTACCGTGCATTTTCTTG CCTCTCACGCCATGGTCATGTGGAAGTCTGGATGAGCTGTATCCTTCCCTAGCCAATATCTTCGATATCTGTCTT CATTGTGTTTTGTTTGTCCTCCAGCTCGTCTTCCTTGCCTCACTCCCATTATTCATTTGGCTTCCATTCGGTGTC TATGTTCTGTATATTTTGACCGCTCTGGCCCTGAATACGCTCATCTGCTACGCTTTGAACCGGGGAATCCCAGCC GACGGTCTCAGGTCAACGGAAGATGATTTCTCAAGGCGGTGGAATCGCCATGAGGACGAGTATTGGATATTCCTC AATGGAATTTGCGTCGGGTTGGTGTTTATTGCATTCTATTTCGCAAGTACAAGACTGACCGAATCAGGAGGAACT GGCTGCAGAATAACGTCGATCGCATATCGCGGACATTCCACCGTCCAGTTGTTGGTGTCCACAATAAAACGTAGA CTTCCCCGTGCTTGTTGTATCGAAATCTCCCGATAAATGGATCCCTGATAGTGACTAGGGCCGGTGTCATATTCG ACATTATCCAATGCCTCATTCAACGTTCCTTGTTGTACGCGACAAATGACGTCCGAGACTGCTACGTGTTGGTTA GAAGAGCCTTGTATCGGTCGGAGATCAAAAAGGTTGTTTTAATCCTACACTCGCAAGGGGGCATCGAGGGTGGAA TGATCCTGGATTGGCTTCTCGACGAAGTACCGCAGGATCTTATCCGGCAACTGGAGATTTACACCTTTGGTTGTC TTGCAAATCACTTCAACAACCCGTATCGCGACATAGCATCGTGTAACGCAGCCATGCGCTATGTGCGCACGGGAG AAATCACTGGCAATGTTCGCAACCGCACAATTCTACACATCGAGCACTATGCCAACCAACGTGATTTTGCATGTC GCTTTGGGGTGCTTAATTTTGACCACAGTAAGCCACGGGACCGTCGCGAAAACCGGTTCATGGGTAAGGTGCTTG TAAGTCCGGCTTCAGGCCACCAATTCAATCAGCATTACCTTGATACGATGTTCCCACTGGATCCAACCAATCGAT TTACGCGGGAGCCGCGGGAGGGTGACTTCATGGACACGGATGTCATAGTAAGTCGACATGATCGGCCTGAAGAAG ACAGGCCTGTCACGGTCCTCGATGCAGCGGGGCTGTTGGACGCAGGCACTGGGGAAGTAGATGGCACCAGTCTGA ACTCGGTACTCTCTGGTAGCACGCAAAACATGAAAGTTGGGCTCAATATGAGGTTGAAGATGCACCAAATGAGCA GATTGTGGTTATATCGAAATGGCGGCCGTCCAGTCGCATGAGCTAGCCTTCTATCTCTGAGGGAGGTAAGGCTTT TTATATGTATTATAGCTGTGTGTGAACAAAATTGTGGCGATGTGCAATTCAGACGTAGTTTGATCAATGACCTTG CTATCACAGATGTCATTAAGTCATGCAGCTAGAGATGGTTGCAAGCTGAATGTCTGCCTTGTCGCCATATGCATA CTTAATGAATGATTGATTTTCCTTTGCGATGATAGAACCTCGGCAGTGTAAGTGATAAGAAAACTCACTACCAAA GATCCTTCCAATAGAACACCTGGCAATGATCAGGTGCCTATGCACCTGCAGAACCTAGAGCTTCGTCATATGGCA GTGCATATGTACTCAGTTCCAGAGGATAGCTGTGAACAAGTCCGGAGATGCCGATAAAATCATGAATAATCGAGA TGCCTCGGCTATTGCCTGAATCGGAAATCCCGTGCTCCACCGAACCGACGTGTGAAGGCGGCCTCCTTAACCCCC GCCAGATCCCAGGACTTTCTTTTTTGCTTCGCGCATTTCCTGTGTTTCAACTCCTTACCTGTCTCGGAGTCAGAG GAATACTAATTATGGCGCAATCAGCGACTCTTTTCAAACCTCCGCCGTTGGATTCCACCAAGGCGCCCATTGAGA ATGTGTTAGAACTGACACCGGTGATTGACGTGGGGAAAGTATGTCTTTTCCTCCCATTCCTTTAGTTCTGGCGAA TCCAACGGGTTTTTCTCTTTCAACAGGATGTTTTTACCAATACGCGACCCCTTTGGCATCCGCCTGGAGCGCGAG GCATTTACGGTGGTGCTGCCATCGCCCAGTGTCTCGCCGCTGCGCTACGAACCGTTCCCGCCGATTTCGCCGTCC ATAGCATGCACTGTTACTTCCTCCTCGCCGGTGACTCCGAGATACCTATATTGTACCACGTGGAACGAGTACGTG ATGGAAGGAGCTATATCACGCGGACGGTACAAGCCAAGCAGCGCGGTCGCCCCATCTTCACCACAACACTGAGTT TCAACAAGGCCAACAGTGGCGGCAAGAAGAAGCTTGAGCATGCATCTTCGATGCCAGCTGTCACTCTGCCAGAGG AGCCTGGACCGGGATCTAAAAGAAAATTCGAGGAATCGGGTGGTGGGCCATTCGAGTCACAGAGAGCGGGTGTTG TAGATCGTCAGTATCTATGGTGTGTCGGTAGAGCTGGAGATTATATGCTGACTGTCTCAGGAAACCTCCCTCCTC AGGAACGGAAAACGAGACGCTTCATGCGATCACGGGGCAAGATTTCCGATGCGGGTGGCCATCAGGCTCATCTGT CTGCCCTTGCATATATGACCGACAGCTATTTCATTGGCACCGTGTCCAGGGTCCATAATATTCCTCGGTTCTCCT CCCCAGAGGAACTTAAGAAGGCACTAAATGCGCTCAAGAACCCGTCTGACCTGGATGACGAGGATATCGCGCGTG CTCTTAAGGAGCTGAAGGAAGAGGAAGCGGCAGATCTACGCCGTCGCTTGGAAGGCGCTTTGCATAGAGTAACTA CTCAGCCACCTCAGGAACATAAGGAAGTGGGCATGATGGTCAGTCTTGATCACTCAATCCACTTCCATAACCCTT GGGCATTTCGGGCAGACGAATGGATGCTTACAGAAATGGAGAGCCCTTGGGCTGGCGAGGGACGAGGCTTGGTGT TACAGAAGATCTGGTCAAAGGATGGTACTTTGATCGCTACATGCACCCAAGAGGTATGTGTGTTGAGTGCTTCTA CTGAAACGACATGTCTAATTGGGTACTTTATAGGGAGTCGTGCGTCTCAAACAAGACGAGCCACCTCGGTCTAAG CTTTGA |