Fungal Genomics

General Properties

Protein ID	Ani_SJS100_1|g2864.t1
Gene name
Location	scaffold_012:333353..333614
Strand	+
Gene length (bp)	261
Transcript length (bp)	261
Coding sequence length (bp)	261
Protein length (aa)	87

Overview

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PFAM Domains

(None)

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

Domain #	Start	End	Length
1	12	34	22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	3
Orthogroup	10768
Change Orthofinder run	3: Aspergillus niger - all strains

Species	Protein ID
Aspergillus niger CBS 112.32	Ani_SJS6_1|g9392.t1
Aspergillus niger CBS 115988	Ani_SJS16_1|g3403.t1
Aspergillus niger CBS 115989	Ani_SJS83_1|g4712.t1
Aspergillus niger CBS 118.52	Ani_SJS14_1|g5031.t1
Aspergillus niger CBS 131.52	Ani_SJS8_1|g6481.t1
Aspergillus niger CBS 147320	Ani_SJS28_1|g7175.t1
Aspergillus niger CBS 147321	Ani_SJS30_1|g6541.t1
Aspergillus niger CBS 147322	Ani_SJS35_1|g5241.t1
Aspergillus niger CBS 147323	Ani_SJS38_1|g7827.t1
Aspergillus niger CBS 147324	Ani_SJS39_1|g3770.t1
Aspergillus niger CBS 147343	Ani_SJS115_1|g7082.t1
Aspergillus niger CBS 147346	Ani_SJS75_1|g49.t1
Aspergillus niger CBS 147347	Ani_SJS76_1|g4517.t1
Aspergillus niger CBS 147352	Ani_SJS95_1|g2234.t1
Aspergillus niger CBS 147353	Ani_SJS100_1|g2864.t1 (this protein)
Aspergillus niger CBS 147371	Ani_SJS27_1|g9289.t1
Aspergillus niger CBS 630.78	Ani_SJS18_1|g5159.t1
Aspergillus niger CBS 769.97	Ani_SJS82_1|g11171.t1

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1|g2864.t1 MSSWYSQYKSSITVILLVLVPIVVICSILAIALLCSEFWSSRKSVTWVFWVKPQNRQKGKRNSQPDLERGRNPPA YQEPLRRQEEN*
Coding	>Ani_SJS100_1|g2864.t1 ATGTCTAGCTGGTATTCGCAATACAAATCATCCATCACCGTCATCCTCTTGGTCCTCGTCCCTATAGTCGTCATC TGCAGCATCCTCGCCATTGCCCTCCTGTGCTCGGAATTCTGGAGCTCCCGCAAATCAGTCACTTGGGTGTTTTGG GTCAAGCCGCAGAACCGTCAGAAGGGGAAACGAAACTCCCAGCCGGATCTCGAACGGGGTCGGAATCCGCCTGCT TACCAGGAGCCGCTGCGCAGACAGGAGGAAAATTGA
Transcript	>Ani_SJS100_1|g2864.t1 ATGTCTAGCTGGTATTCGCAATACAAATCATCCATCACCGTCATCCTCTTGGTCCTCGTCCCTATAGTCGTCATC TGCAGCATCCTCGCCATTGCCCTCCTGTGCTCGGAATTCTGGAGCTCCCGCAAATCAGTCACTTGGGTGTTTTGG GTCAAGCCGCAGAACCGTCAGAAGGGGAAACGAAACTCCCAGCCGGATCTCGAACGGGGTCGGAATCCGCCTGCT TACCAGGAGCCGCTGCGCAGACAGGAGGAAAATTGA
Gene	>Ani_SJS100_1|g2864.t1 ATGTCTAGCTGGTATTCGCAATACAAATCATCCATCACCGTCATCCTCTTGGTCCTCGTCCCTATAGTCGTCATC TGCAGCATCCTCGCCATTGCCCTCCTGTGCTCGGAATTCTGGAGCTCCCGCAAATCAGTCACTTGGGTGTTTTGG GTCAAGCCGCAGAACCGTCAGAAGGGGAAACGAAACTCCCAGCCGGATCTCGAACGGGGTCGGAATCCGCCTGCT TACCAGGAGCCGCTGCGCAGACAGGAGGAAAATTGA